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PI0028806 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028806
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:17865246..17865863
RNA-Seq ExpressionPI0028806
SyntenyPI0028806
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025858.1 retrotransposon protein [Cucumis melo var. makuwa]4.4e-5766.01Show/hide
Query:  APKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKE
        AP+H+WTKEEE  L+ECL+ELVS+GGWK DNGTFR GYL+QL R+M EK+PGC ++ +  IDYRIK +K+T Q IA+  G +CSGF WNDE KCI+A+KE
Subjt:  APKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKE

Query:  LFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGG
        LF+NWV+SHPAAK LLN PFP YD L +VFG+DRA G   +TF DV SN PGG
Subjt:  LFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGG

KAA0038975.1 retrotransposon protein [Cucumis melo var. makuwa]3.7e-5665.36Show/hide
Query:  APKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKE
        AP+H+WT+EEE  LVECL+ELVS+GGWK DNGTFR GYL+QL R+M EK+PGC ++ +  ID RIK +K+T Q IA+  G +CSGF WNDE KCI+A+KE
Subjt:  APKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKE

Query:  LFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGG
        LF+NWV+SHPAAK LLN PFP YD L +VFG+DRA G   +TF DV SN PGG
Subjt:  LFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGG

KAA0040114.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-5665.36Show/hide
Query:  APKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKE
        AP+H+WT+E+E  LVECL+ELVS+GGWK DNGTFR GYL+QL R+M EK+PGC ++ +  ID RIK +K+T Q IA+  G +CSGF WNDE KCI+A+KE
Subjt:  APKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKE

Query:  LFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGG
        LFNNWV+SHPAAK LLN PFP YD L +VFG+DRA G   +TF DV SN PGG
Subjt:  LFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGG

KAA0064810.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-5666.01Show/hide
Query:  APKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKE
        AP+H+WT+EEE  LVECL+ELVS+GGWK DNGTFR GYL+QL R+M EK+PGC ++ +  ID RIK +K+T Q IAK  G +CSGF WNDE KCI+A+KE
Subjt:  APKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKE

Query:  LFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGG
        LF+NWV+SHPAAK LLN PFP YD L +VFG+DRA G   +TF DV SN PGG
Subjt:  LFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGG

XP_031742657.1 uncharacterized protein LOC116404426 [Cucumis sativus]3.5e-6264.94Show/hide
Query:  MASFYWAPKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKC
        M S   APKH+WTKEEE+ LVEC+V+LVS G WK DNGTFR GYL+QL R+MV K+PGCN+  +  IDYRIK +K++ Q IA+  G SCSGF WND+ KC
Subjt:  MASFYWAPKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKC

Query:  IIAKKELFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGGFKEFLADYENDTEIP
        IIA+KE F+NWV+SHPAAK LLN PFP YD   +VFGKDRAMGA  +TF DV SNVP GF+EF    +ND EIP
Subjt:  IIAKKELFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGGFKEFLADYENDTEIP

TrEMBL top hitse value%identityAlignment
A0A5A7SI64 Retrotransposon protein2.1e-5766.01Show/hide
Query:  APKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKE
        AP+H+WTKEEE  L+ECL+ELVS+GGWK DNGTFR GYL+QL R+M EK+PGC ++ +  IDYRIK +K+T Q IA+  G +CSGF WNDE KCI+A+KE
Subjt:  APKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKE

Query:  LFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGG
        LF+NWV+SHPAAK LLN PFP YD L +VFG+DRA G   +TF DV SN PGG
Subjt:  LFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGG

A0A5A7T9H0 Retrotransposon protein8.1e-5765.36Show/hide
Query:  APKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKE
        AP+H+WT+E+E  LVECL+ELVS+GGWK DNGTFR GYL+QL R+M EK+PGC ++ +  ID RIK +K+T Q IA+  G +CSGF WNDE KCI+A+KE
Subjt:  APKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKE

Query:  LFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGG
        LFNNWV+SHPAAK LLN PFP YD L +VFG+DRA G   +TF DV SN PGG
Subjt:  LFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGG

A0A5A7TRV1 Retrotransposon protein1.8e-5665.36Show/hide
Query:  APKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKE
        AP+H+WT+EEE  LVECL+ELVS+GGWK DNGTFR GYL+QL R+M EK+PGC ++ +  ID RIK +K+T Q IA+  G +CSGF WNDE KCI+A+KE
Subjt:  APKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKE

Query:  LFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGG
        LF+NWV+SHPAAK LLN PFP YD L +VFG+DRA G   +TF DV SN PGG
Subjt:  LFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGG

A0A5A7VCA3 Retrotransposon protein6.2e-5766.01Show/hide
Query:  APKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKE
        AP+H+WT+EEE  LVECL+ELVS+GGWK DNGTFR GYL+QL R+M EK+PGC ++ +  ID RIK +K+T Q IAK  G +CSGF WNDE KCI+A+KE
Subjt:  APKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKE

Query:  LFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGG
        LF+NWV+SHPAAK LLN PFP YD L +VFG+DRA G   +TF DV SN PGG
Subjt:  LFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGG

A0A5D3CWL2 Retrotransposon protein1.8e-5665.36Show/hide
Query:  APKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKE
        AP+H+WT+EEE  LVECL+ELVS+GGWK DNGTFR GYL+QL R+M EK+PGC ++ +  ID RIK +K+T Q IA+  G +CSGF WNDE KCI+A+KE
Subjt:  APKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKE

Query:  LFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGG
        LF+NWV+SHPAAK LLN PFP YD L +VFG+DRA G   +TF DV SN PGG
Subjt:  LFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.1 unknown protein7.1e-0527.14Show/hide
Query:  KCGSSCSGFVWNDEVKCIIAKKELFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVK
        KC     GFVW+   + +I    L++ ++K+HP A+     P   + +LC ++G   A G  + +  D++
Subjt:  KCGSSCSGFVWNDEVKCIIAKKELFNNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVK

AT2G24960.2 unknown protein4.8e-0928.06Show/hide
Query:  WTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQ-GSRTIDYRIKNMKKTLQVIAK--KCGSSCSGFVWNDEVKCIIAKKELF
        WT   + +L++ LVE V+ G         R+G  + +     E +   N + GS+     +KN  K L+ +    K     +GF W+     +IA  +++
Subjt:  WTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQ-GSRTIDYRIKNMKKTLQVIAK--KCGSSCSGFVWNDEVKCIIAKKELF

Query:  NNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTK
        N ++++HP A+       P Y NLCF+FGK+ + G  T+
Subjt:  NNWVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTK

AT4G02210.1 unknown protein1.6e-0430.43Show/hide
Query:  IKNMKKTL--QVIAKKCGSSCSGFVWNDEVKCIIAKKELFNNWVKSHPAAKCLLNNPFPRYDNLCFVFG
        +KN  K+L  Q  A K      GF W++E + + A   ++ +++K+H  A+  +  P P Y +LC + G
Subjt:  IKNMKKTL--QVIAKKCGSSCSGFVWNDEVKCIIAKKELFNNWVKSHPAAKCLLNNPFPRYDNLCFVFG

AT4G02210.2 unknown protein1.6e-0430.43Show/hide
Query:  IKNMKKTL--QVIAKKCGSSCSGFVWNDEVKCIIAKKELFNNWVKSHPAAKCLLNNPFPRYDNLCFVFG
        +KN  K+L  Q  A K      GF W++E + + A   ++ +++K+H  A+  +  P P Y +LC + G
Subjt:  IKNMKKTL--QVIAKKCGSSCSGFVWNDEVKCIIAKKELFNNWVKSHPAAKCLLNNPFPRYDNLCFVFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTTTCTACTGGGCCCCCAAACACATCTGGACGAAAGAGGAAGAGTCGTACCTAGTCGAGTGCTTGGTGGAGTTGGTCTCTGTCGGTGGCTGGAAGTTAGATAA
CGGTACCTTCCGTCTTGGATACCTGTCTCAGCTACAAAGAATTATGGTGGAGAAAATGCCAGGATGTAACATCCAGGGTTCGCGGACAATAGACTATCGGATAAAAAACA
TGAAGAAAACGTTACAGGTCATCGCAAAAAAGTGTGGGTCATCGTGTAGTGGGTTTGTTTGGAACGATGAAGTGAAGTGCATCATCGCTAAGAAGGAGTTGTTTAACAAT
TGGGTGAAGAGTCATCCTGCTGCCAAGTGCCTCCTAAACAACCCATTTCCCCGTTACGACAACCTATGCTTCGTATTTGGGAAAGATCGTGCGATGGGAGCGCGCACGAA
GACATTTACCGATGTGAAGTCGAATGTGCCTGGAGGGTTCAAGGAATTTCTTGCTGATTATGAAAACGATACGGAGATCCCTAGATGTACAGTTAGGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTTTCTACTGGGCCCCCAAACACATCTGGACGAAAGAGGAAGAGTCGTACCTAGTCGAGTGCTTGGTGGAGTTGGTCTCTGTCGGTGGCTGGAAGTTAGATAA
CGGTACCTTCCGTCTTGGATACCTGTCTCAGCTACAAAGAATTATGGTGGAGAAAATGCCAGGATGTAACATCCAGGGTTCGCGGACAATAGACTATCGGATAAAAAACA
TGAAGAAAACGTTACAGGTCATCGCAAAAAAGTGTGGGTCATCGTGTAGTGGGTTTGTTTGGAACGATGAAGTGAAGTGCATCATCGCTAAGAAGGAGTTGTTTAACAAT
TGGGTGAAGAGTCATCCTGCTGCCAAGTGCCTCCTAAACAACCCATTTCCCCGTTACGACAACCTATGCTTCGTATTTGGGAAAGATCGTGCGATGGGAGCGCGCACGAA
GACATTTACCGATGTGAAGTCGAATGTGCCTGGAGGGTTCAAGGAATTTCTTGCTGATTATGAAAACGATACGGAGATCCCTAGATGTACAGTTAGGGACTAG
Protein sequenceShow/hide protein sequence
MASFYWAPKHIWTKEEESYLVECLVELVSVGGWKLDNGTFRLGYLSQLQRIMVEKMPGCNIQGSRTIDYRIKNMKKTLQVIAKKCGSSCSGFVWNDEVKCIIAKKELFNN
WVKSHPAAKCLLNNPFPRYDNLCFVFGKDRAMGARTKTFTDVKSNVPGGFKEFLADYENDTEIPRCTVRD