; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0028818 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028818
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionF-box protein
Genome locationchr09:20360051..20361254
RNA-Seq ExpressionPI0028818
SyntenyPI0028818
Gene Ontology termsNA
InterPro domainsIPR017451 - F-box associated interaction domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039382.1 F-box protein [Cucumis melo var. makuwa]7.4e-1742.86Show/hide
Query:  NPEMHAFYTNNMSSSVTSSGVDTDSYGAICVMTSCNGLLF-AVLTSDGGCSYEAIINPITNEVFKLPIPPSN-DCSDIGFGFIHRTNQYKLFRV-PTLIP
        NP++H    ++ +S V S G + D +  I ++ SCNGLL+    T D  C  E I+NP+TNE  ++P P    D   IGFGF  RT QYKLFR  P ++ 
Subjt:  NPEMHAFYTNNMSSSVTSSGVDTDSYGAICVMTSCNGLLF-AVLTSDGGCSYEAIINPITNEVFKLPIPPSN-DCSDIGFGFIHRTNQYKLFRV-PTLIP

Query:  -----YSDMEIIHFDRNGTYQFEDIVCLPFNIDHNGVYLNGFIYWMG
             +  MEI  FD NG  Q+     LPF + H+G YLNG IYW+G
Subjt:  -----YSDMEIIHFDRNGTYQFEDIVCLPFNIDHNGVYLNGFIYWMG

KGN52568.1 hypothetical protein Csa_008927 [Cucumis sativus]1.1e-1540Show/hide
Query:  RYFNPEMHAFYTNNMSSSVTSSGVDTDSYGAICVMTSCNGLLF-AVLTSDGGCSYEAIINPITNEVFKLPIPPSN-DCSDIGFGFIHRTNQYKLFRV-PT
        ++ NP++     +  +SSV S   + D + +I ++ SCNGLL+      D  C  E I+NP+TNE  ++P P    D   +GFGF  RT QYKLFR  P 
Subjt:  RYFNPEMHAFYTNNMSSSVTSSGVDTDSYGAICVMTSCNGLLF-AVLTSDGGCSYEAIINPITNEVFKLPIPPSN-DCSDIGFGFIHRTNQYKLFRV-PT

Query:  LIP-----YSDMEIIHFDRNGTYQFEDIVCLPFNIDHNGVYLNGFIYWMG
        ++P     +  M+I  FD NG  Q+     LPF + H+G YLNG IYW+G
Subjt:  LIP-----YSDMEIIHFDRNGTYQFEDIVCLPFNIDHNGVYLNGFIYWMG

TYK02998.1 F-box protein [Cucumis melo var. makuwa]8.7e-4265.69Show/hide
Query:  MHAFYTNNMSSSVTSSGVDTD-SYGAICVMTSCNGLLFAVLTSDGGCSYEAIINPITNEVFKLPIPPSNDCSDIGFGFIHRTNQYKLFRVPTLIPYSDME
        MHAF TNNM SSVTSSGVDT   +GAICV+TSCNGLLFA+L+S G     AIINP+TNE F+L IPP  + + IGFGF  +TNQYKLF V   +PYS+M+
Subjt:  MHAFYTNNMSSSVTSSGVDTD-SYGAICVMTSCNGLLFAVLTSDGGCSYEAIINPITNEVFKLPIPPSNDCSDIGFGFIHRTNQYKLFRVPTLIPYSDME

Query:  IIHFDRNGTYQFEDIVCLPFNIDHNGVYLNGFIYWMG
        I  FDR+GT + +DI+CLPFNID +G YLNGFIYW+G
Subjt:  IIHFDRNGTYQFEDIVCLPFNIDHNGVYLNGFIYWMG

XP_004141601.1 F-box protein At3g07870 [Cucumis sativus]8.5e-1336.67Show/hide
Query:  LRRYFNPEMHAFYTNNMSSSVTSSGVDTDSYGAICVMTSCNGLLFAVLTSDGGCSYEAIINPITNEVFKLPIPPSNDCSD-IGFGFIHRTNQYKLFRVPT
        + R  N ++H    + MS   +    D  ++  + +++SC+ LL      D     E I+NP+TNE  +LP    ++ S   GFGF  +T QYKLFRV  
Subjt:  LRRYFNPEMHAFYTNNMSSSVTSSGVDTDSYGAICVMTSCNGLLFAVLTSDGGCSYEAIINPITNEVFKLPIPPSNDCSD-IGFGFIHRTNQYKLFRVPT

Query:  LIP---YSDMEIIHF-DRNGT-YQFEDIVCLPFNIDHNGVYLNGFIYWMG
              YS MEI+ F DR+ T  ++    C P + D +G YLNG IYWMG
Subjt:  LIP---YSDMEIIHF-DRNGT-YQFEDIVCLPFNIDHNGVYLNGFIYWMG

XP_008459707.1 PREDICTED: F-box protein At3g07870-like [Cucumis melo]7.4e-1742.86Show/hide
Query:  NPEMHAFYTNNMSSSVTSSGVDTDSYGAICVMTSCNGLLF-AVLTSDGGCSYEAIINPITNEVFKLPIPPSN-DCSDIGFGFIHRTNQYKLFRV-PTLIP
        NP++H    ++ +S V S G + D +  I ++ SCNGLL+    T D  C  E I+NP+TNE  ++P P    D   IGFGF  RT QYKLFR  P ++ 
Subjt:  NPEMHAFYTNNMSSSVTSSGVDTDSYGAICVMTSCNGLLF-AVLTSDGGCSYEAIINPITNEVFKLPIPPSN-DCSDIGFGFIHRTNQYKLFRV-PTLIP

Query:  -----YSDMEIIHFDRNGTYQFEDIVCLPFNIDHNGVYLNGFIYWMG
             +  MEI  FD NG  Q+     LPF + H+G YLNG IYW+G
Subjt:  -----YSDMEIIHFDRNGTYQFEDIVCLPFNIDHNGVYLNGFIYWMG

TrEMBL top hitse value%identityAlignment
A0A0A0KSN0 Uncharacterized protein5.2e-1640Show/hide
Query:  RYFNPEMHAFYTNNMSSSVTSSGVDTDSYGAICVMTSCNGLLF-AVLTSDGGCSYEAIINPITNEVFKLPIPPSN-DCSDIGFGFIHRTNQYKLFRV-PT
        ++ NP++     +  +SSV S   + D + +I ++ SCNGLL+      D  C  E I+NP+TNE  ++P P    D   +GFGF  RT QYKLFR  P 
Subjt:  RYFNPEMHAFYTNNMSSSVTSSGVDTDSYGAICVMTSCNGLLF-AVLTSDGGCSYEAIINPITNEVFKLPIPPSN-DCSDIGFGFIHRTNQYKLFRV-PT

Query:  LIP-----YSDMEIIHFDRNGTYQFEDIVCLPFNIDHNGVYLNGFIYWMG
        ++P     +  M+I  FD NG  Q+     LPF + H+G YLNG IYW+G
Subjt:  LIP-----YSDMEIIHFDRNGTYQFEDIVCLPFNIDHNGVYLNGFIYWMG

A0A0A0KUJ1 FBA_3 domain-containing protein4.1e-1336.67Show/hide
Query:  LRRYFNPEMHAFYTNNMSSSVTSSGVDTDSYGAICVMTSCNGLLFAVLTSDGGCSYEAIINPITNEVFKLPIPPSNDCSD-IGFGFIHRTNQYKLFRVPT
        + R  N ++H    + MS   +    D  ++  + +++SC+ LL      D     E I+NP+TNE  +LP    ++ S   GFGF  +T QYKLFRV  
Subjt:  LRRYFNPEMHAFYTNNMSSSVTSSGVDTDSYGAICVMTSCNGLLFAVLTSDGGCSYEAIINPITNEVFKLPIPPSNDCSD-IGFGFIHRTNQYKLFRVPT

Query:  LIP---YSDMEIIHF-DRNGT-YQFEDIVCLPFNIDHNGVYLNGFIYWMG
              YS MEI+ F DR+ T  ++    C P + D +G YLNG IYWMG
Subjt:  LIP---YSDMEIIHF-DRNGT-YQFEDIVCLPFNIDHNGVYLNGFIYWMG

A0A1S3CB99 F-box protein At3g07870-like3.6e-1742.86Show/hide
Query:  NPEMHAFYTNNMSSSVTSSGVDTDSYGAICVMTSCNGLLF-AVLTSDGGCSYEAIINPITNEVFKLPIPPSN-DCSDIGFGFIHRTNQYKLFRV-PTLIP
        NP++H    ++ +S V S G + D +  I ++ SCNGLL+    T D  C  E I+NP+TNE  ++P P    D   IGFGF  RT QYKLFR  P ++ 
Subjt:  NPEMHAFYTNNMSSSVTSSGVDTDSYGAICVMTSCNGLLF-AVLTSDGGCSYEAIINPITNEVFKLPIPPSN-DCSDIGFGFIHRTNQYKLFRV-PTLIP

Query:  -----YSDMEIIHFDRNGTYQFEDIVCLPFNIDHNGVYLNGFIYWMG
             +  MEI  FD NG  Q+     LPF + H+G YLNG IYW+G
Subjt:  -----YSDMEIIHFDRNGTYQFEDIVCLPFNIDHNGVYLNGFIYWMG

A0A5A7T7C6 F-box protein3.6e-1742.86Show/hide
Query:  NPEMHAFYTNNMSSSVTSSGVDTDSYGAICVMTSCNGLLF-AVLTSDGGCSYEAIINPITNEVFKLPIPPSN-DCSDIGFGFIHRTNQYKLFRV-PTLIP
        NP++H    ++ +S V S G + D +  I ++ SCNGLL+    T D  C  E I+NP+TNE  ++P P    D   IGFGF  RT QYKLFR  P ++ 
Subjt:  NPEMHAFYTNNMSSSVTSSGVDTDSYGAICVMTSCNGLLF-AVLTSDGGCSYEAIINPITNEVFKLPIPPSN-DCSDIGFGFIHRTNQYKLFRV-PTLIP

Query:  -----YSDMEIIHFDRNGTYQFEDIVCLPFNIDHNGVYLNGFIYWMG
             +  MEI  FD NG  Q+     LPF + H+G YLNG IYW+G
Subjt:  -----YSDMEIIHFDRNGTYQFEDIVCLPFNIDHNGVYLNGFIYWMG

A0A5D3BVH7 F-box protein4.2e-4265.69Show/hide
Query:  MHAFYTNNMSSSVTSSGVDTD-SYGAICVMTSCNGLLFAVLTSDGGCSYEAIINPITNEVFKLPIPPSNDCSDIGFGFIHRTNQYKLFRVPTLIPYSDME
        MHAF TNNM SSVTSSGVDT   +GAICV+TSCNGLLFA+L+S G     AIINP+TNE F+L IPP  + + IGFGF  +TNQYKLF V   +PYS+M+
Subjt:  MHAFYTNNMSSSVTSSGVDTD-SYGAICVMTSCNGLLFAVLTSDGGCSYEAIINPITNEVFKLPIPPSNDCSDIGFGFIHRTNQYKLFRVPTLIPYSDME

Query:  IIHFDRNGTYQFEDIVCLPFNIDHNGVYLNGFIYWMG
        I  FDR+GT + +DI+CLPFNID +G YLNGFIYW+G
Subjt:  IIHFDRNGTYQFEDIVCLPFNIDHNGVYLNGFIYWMG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCAGATCGAAGAAAGAAAGTTTGAACAAGATTACCTAAACAATATGCTGTGGAAGCTTCCAACTTTTGTTCACAAAGTTCTTACTTTCCGGCTTCCCCATCTTCT
TCGATTGAGAGAAGGGGAAATCTTCTTAAGTTTCGGGCAACCAATTTCCCCCTTCTCTCAATCGAAGAAGAAGGAGAAGCCGAAACTTAAGAAGATTTTCCCCTTCTCTC
AATCAAAGAAGATGGGGAAGCTGGAAAATTCTTCTTTGCGTCGTTATTTCAATCCCGAGATGCATGCTTTTTATACCAATAACATGAGTTCTTCTGTTACCTCATCTGGG
GTTGACACTGATTCTTATGGAGCAATCTGTGTTATGACTTCATGCAATGGCCTTCTGTTTGCTGTCTTAACTAGTGATGGTGGTTGTTCTTATGAAGCTATAATCAATCC
AATAACTAACGAGGTCTTCAAACTTCCAATACCTCCATCCAATGACTGTAGCGATATCGGATTTGGTTTCATCCATCGGACGAATCAGTACAAATTGTTTAGAGTTCCCA
CACTCATCCCCTATAGCGATATGGAAATTATCCATTTCGATAGAAATGGAACCTACCAATTTGAGGATATTGTGTGTCTTCCTTTCAACATTGACCACAATGGTGTTTAC
TTAAATGGATTCATCTATTGGATGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCAGATCGAAGAAAGAAAGTTTGAACAAGATTACCTAAACAATATGCTGTGGAAGCTTCCAACTTTTGTTCACAAAGTTCTTACTTTCCGGCTTCCCCATCTTCT
TCGATTGAGAGAAGGGGAAATCTTCTTAAGTTTCGGGCAACCAATTTCCCCCTTCTCTCAATCGAAGAAGAAGGAGAAGCCGAAACTTAAGAAGATTTTCCCCTTCTCTC
AATCAAAGAAGATGGGGAAGCTGGAAAATTCTTCTTTGCGTCGTTATTTCAATCCCGAGATGCATGCTTTTTATACCAATAACATGAGTTCTTCTGTTACCTCATCTGGG
GTTGACACTGATTCTTATGGAGCAATCTGTGTTATGACTTCATGCAATGGCCTTCTGTTTGCTGTCTTAACTAGTGATGGTGGTTGTTCTTATGAAGCTATAATCAATCC
AATAACTAACGAGGTCTTCAAACTTCCAATACCTCCATCCAATGACTGTAGCGATATCGGATTTGGTTTCATCCATCGGACGAATCAGTACAAATTGTTTAGAGTTCCCA
CACTCATCCCCTATAGCGATATGGAAATTATCCATTTCGATAGAAATGGAACCTACCAATTTGAGGATATTGTGTGTCTTCCTTTCAACATTGACCACAATGGTGTTTAC
TTAAATGGATTCATCTATTGGATGGGATGA
Protein sequenceShow/hide protein sequence
MWQIEERKFEQDYLNNMLWKLPTFVHKVLTFRLPHLLRLREGEIFLSFGQPISPFSQSKKKEKPKLKKIFPFSQSKKMGKLENSSLRRYFNPEMHAFYTNNMSSSVTSSG
VDTDSYGAICVMTSCNGLLFAVLTSDGGCSYEAIINPITNEVFKLPIPPSNDCSDIGFGFIHRTNQYKLFRVPTLIPYSDMEIIHFDRNGTYQFEDIVCLPFNIDHNGVY
LNGFIYWMG