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PI0028838 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028838
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPlant transposase
Genome locationchr01:20371036..20371912
RNA-Seq ExpressionPI0028838
SyntenyPI0028838
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032260.1 Plant transposase [Cucumis melo var. makuwa]2.8e-0854.67Show/hide
Query:  MSCSSSIIEDAISRVFGPDHGYVRGLGF--------GVTRSKEKISEQNSNNPV-RVPTSTDI----PTPILNSP
        ++ SSSII+DAISRV GP+ GYVR LGF         + + KEK S++NSN+ V RVP+ST I    PTPI+NSP
Subjt:  MSCSSSIIEDAISRVFGPDHGYVRGLGF--------GVTRSKEKISEQNSNNPV-RVPTSTDI----PTPILNSP

KAA0053344.1 hypothetical protein E6C27_scaffold27G00320 [Cucumis melo var. makuwa]2.7e-1165.67Show/hide
Query:  MSCSSSIIEDAISRVFGPDHGYVRGLGFGVTRSKEKISEQNSNNPV-RVPTS----TDIPTPILNSP
        ++ SSSII+DAISRV GPD  YVRGLGFGVT SKEK S+ NSN+ V RV +S    T  PTPI+NSP
Subjt:  MSCSSSIIEDAISRVFGPDHGYVRGLGFGVTRSKEKISEQNSNNPV-RVPTS----TDIPTPILNSP

TYK17066.1 Plant transposase [Cucumis melo var. makuwa]2.8e-0854.67Show/hide
Query:  MSCSSSIIEDAISRVFGPDHGYVRGLGF--------GVTRSKEKISEQNSNNPV-RVPTSTDI----PTPILNSP
        ++ SSSII+DAISRV GP+ GYVR LGF         + + KEK S++NSN+ V RVP+ST I    PTPI+NSP
Subjt:  MSCSSSIIEDAISRVFGPDHGYVRGLGF--------GVTRSKEKISEQNSNNPV-RVPTSTDI----PTPILNSP

XP_031739982.1 DNA topoisomerase 3-alpha-like [Cucumis sativus]4.9e-0585.29Show/hide
Query:  MSCSSSIIEDAISRVFGPDHGYVRGLGFGVTRSK
        MS SSSIIEDAIS VFG D  YVRGLGFGVTRSK
Subjt:  MSCSSSIIEDAISRVFGPDHGYVRGLGFGVTRSK

XP_038900033.1 uncharacterized protein LOC120087197 [Benincasa hispida]3.7e-0538Show/hide
Query:  SCSSSIIEDAISRVFGPDHGYVRGLGFGVT---------------------------------------RSKEKISEQNSNNPVRVPTSTDIPTPILNSP
        S S+SII+DAISRVFG +H +VRGLGFGVT                                       R KE++ E++SNN VR     + P P+LNSP
Subjt:  SCSSSIIEDAISRVFGPDHGYVRGLGFGVT---------------------------------------RSKEKISEQNSNNPVRVPTSTDIPTPILNSP

TrEMBL top hitse value%identityAlignment
A0A5A7SN98 Plant transposase1.3e-0854.67Show/hide
Query:  MSCSSSIIEDAISRVFGPDHGYVRGLGF--------GVTRSKEKISEQNSNNPV-RVPTSTDI----PTPILNSP
        ++ SSSII+DAISRV GP+ GYVR LGF         + + KEK S++NSN+ V RVP+ST I    PTPI+NSP
Subjt:  MSCSSSIIEDAISRVFGPDHGYVRGLGF--------GVTRSKEKISEQNSNNPV-RVPTSTDI----PTPILNSP

A0A5A7TLJ2 Plant transposase6.9e-0575.68Show/hide
Query:  SSSIIEDAISRVFGPDHGYVRGLGFGVTRSKEKISEQ
        SSSII+DAISRV GPD  YVRGLGFGVT SK   S Q
Subjt:  SSSIIEDAISRVFGPDHGYVRGLGFGVTRSKEKISEQ

A0A5A7UDP5 Uncharacterized protein1.3e-1165.67Show/hide
Query:  MSCSSSIIEDAISRVFGPDHGYVRGLGFGVTRSKEKISEQNSNNPV-RVPTS----TDIPTPILNSP
        ++ SSSII+DAISRV GPD  YVRGLGFGVT SKEK S+ NSN+ V RV +S    T  PTPI+NSP
Subjt:  MSCSSSIIEDAISRVFGPDHGYVRGLGFGVTRSKEKISEQNSNNPV-RVPTS----TDIPTPILNSP

A0A5A7UVF2 Plant transposase5.3e-0570Show/hide
Query:  MSCSSSIIEDAISRVFGPDHGYVRGLGFGVTRSKEKISEQ
        ++ SSSII+DAISRV GPD  YVRGLGFGVT SK   S Q
Subjt:  MSCSSSIIEDAISRVFGPDHGYVRGLGFGVTRSKEKISEQ

A0A5D3D2Q7 Plant transposase1.3e-0854.67Show/hide
Query:  MSCSSSIIEDAISRVFGPDHGYVRGLGF--------GVTRSKEKISEQNSNNPV-RVPTSTDI----PTPILNSP
        ++ SSSII+DAISRV GP+ GYVR LGF         + + KEK S++NSN+ V RVP+ST I    PTPI+NSP
Subjt:  MSCSSSIIEDAISRVFGPDHGYVRGLGF--------GVTRSKEKISEQNSNNPV-RVPTSTDI----PTPILNSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTGTTCAAGTAGTATAATTGAAGATGCAATTAGTAGAGTTTTCGGTCCCGATCATGGCTATGTACGAGGATTAGGATTTGGTGTGACTAGATCGAAGGAAAAAAT
AAGTGAACAAAATTCGAATAATCCTGTTAGAGTACCAACATCGACAGATATTCCTACTCCAATCCTAAATTCCCCACAGGTGATTGATATGTGGAAAAAAACATTGGAGC
AGTCTCCTAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTGTTCAAGTAGTATAATTGAAGATGCAATTAGTAGAGTTTTCGGTCCCGATCATGGCTATGTACGAGGATTAGGATTTGGTGTGACTAGATCGAAGGAAAAAAT
AAGTGAACAAAATTCGAATAATCCTGTTAGAGTACCAACATCGACAGATATTCCTACTCCAATCCTAAATTCCCCACAGGTGATTGATATGTGGAAAAAAACATTGGAGC
AGTCTCCTAGTTAG
Protein sequenceShow/hide protein sequence
MSCSSSIIEDAISRVFGPDHGYVRGLGFGVTRSKEKISEQNSNNPVRVPTSTDIPTPILNSPQVIDMWKKTLEQSPS