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PI0028852 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028852
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr12:16254508..16254672
RNA-Seq ExpressionPI0028852
SyntenyPI0028852
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054126.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]6.9e-1474.07Show/hide
Query:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
        MTN D+ D+IDE DST+ATT  +DIHYIETS  WSQWRD+LAE+MF+DWELRNQ
Subjt:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
KAA0067286.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.2e-1374.07Show/hide
Query:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
        MTN D+ DDIDE DST+ATT  +DIHYIETS  WS+WRD+LAE+MFSDWEL NQ
Subjt:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]5.3e-1475.93Show/hide
Query:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
        MTN D+ D+IDE DST+ATT  +DIHYIETS  WSQWRD+LAE+MFSDWELRNQ
Subjt:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]5.3e-1475.93Show/hide
Query:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
        MTN D+ D+IDE DST+ATT  +DIHYIETS  WSQWRD+LAE+MFSDWELRNQ
Subjt:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
TYK10899.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.2e-1374.07Show/hide
Query:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
        MTN D+ DDIDE DST+ATT  +DIHYIETS  WS+WRD+LAE+MFSDWEL NQ
Subjt:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
TrEMBL top hitse value%identityAlignment
A0A5A7UIM7 Putative nuclease HARBI13.3e-1474.07Show/hide
Query:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
        MTN D+ D+IDE DST+ATT  +DIHYIETS  WSQWRD+LAE+MF+DWELRNQ
Subjt:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
A0A5A7VJX3 Retrotransposon protein2.6e-1475.93Show/hide
Query:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
        MTN D+ D+IDE DST+ATT  +DIHYIETS  WSQWRD+LAE+MFSDWELRNQ
Subjt:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
A0A5A7VLF4 Putative nuclease HARBI15.7e-1474.07Show/hide
Query:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
        MTN D+ DDIDE DST+ATT  +DIHYIETS  WS+WRD+LAE+MFSDWEL NQ
Subjt:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
A0A5D3BL48 Putative nuclease HARBI12.6e-1475.93Show/hide
Query:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
        MTN D+ D+IDE DST+ATT  +DIHYIETS  WSQWRD+LAE+MFSDWELRNQ
Subjt:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
A0A5D3CKZ1 Putative nuclease HARBI15.7e-1474.07Show/hide
Query:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
        MTN D+ DDIDE DST+ATT  +DIHYIETS  WS+WRD+LAE+MFSDWEL NQ
Subjt:  MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACAATGACGTATCAGATGACATTGATGAGGATGACTCTACATACGCCACCACTGGCGGTGAAGATATTCATTACATAGAGACCTCGAGAGCGTGGAGTCAATG
GAGGGACGAGCTTGCCGAAAAAATGTTCAGTGATTGGGAGTTGCGTAATCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACAATGACGTATCAGATGACATTGATGAGGATGACTCTACATACGCCACCACTGGCGGTGAAGATATTCATTACATAGAGACCTCGAGAGCGTGGAGTCAATG
GAGGGACGAGCTTGCCGAAAAAATGTTCAGTGATTGGGAGTTGCGTAATCAATAA
Protein sequenceShow/hide protein sequence
MTNNDVSDDIDEDDSTYATTGGEDIHYIETSRAWSQWRDELAEKMFSDWELRNQ