; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0028861 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028861
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionflocculation protein FLO11-like
Genome locationchr10:56407..57933
RNA-Seq ExpressionPI0028861
SyntenyPI0028861
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036856.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.0e-4135.31Show/hide
Query:  SSPVPSPPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPSNSDHHQSSASTPTLDDHLTNPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQ
        SSP+ SP   +P + +   S   +P +  +    ++A    +  D+          D +   P  D+V   A   P S PT++K   K+       ++T+
Subjt:  SSPVPSPPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPSNSDHHQSSASTPTLDDHLTNPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQ

Query:  SGRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIH
        +GR+++PL++  VPI+GISFH E ++H+WK+V+QRRIA E ++SD HHSC+++M LI +A+L  T+S+V P+YP+LIRE  VN+PT+ ++PSSPDY T+H
Subjt:  SGRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIH

Query:  IRGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASE--------------------------------------------------------------
        IRG  F+ SP  +N F+G  +  N SPS  ++D LASE                                                              
Subjt:  IRGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASE--------------------------------------------------------------

Query:  -ITGDEAHGPSPTKIQLSYRLFQGAHVPDIDHSFHPS
         +T  +A GP P  + LSYRLFQG+HVPDIDH  HPS
Subjt:  -ITGDEAHGPSPTKIQLSYRLFQGAHVPDIDHSFHPS

KAA0056211.1 uncharacterized protein E6C27_scaffold85G00030 [Cucumis melo var. makuwa]5.5e-3931.28Show/hide
Query:  VGPAVKNVRTNKHGVRLRGSSNVSSPPVSSAPLVSSSSSTTNTSTSSPVPS-PPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPSNSDHHQSSASTP
        V PAV   R ++  V     S++ S    + PL+   +  +   T+  +PS PP ++ +  SSS+    IP     +   S A+ +  +S  H S +   
Subjt:  VGPAVKNVRTNKHGVRLRGSSNVSSPPVSSAPLVSSSSSTTNTSTSSPVPS-PPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPSNSDHHQSSASTP

Query:  TLDDHLTNPPPDSVSDP-----APQS--------TPTKVKSKT----KRVSTQSGRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDH
        T     T  PP+ +  P     AP S        +P   K KT    + V+T++ R+++P +V  VPI+GISFHHE  V  WK+V+Q+RI  E ++SD H
Subjt:  TLDDHLTNPPPDSVSDP-----APQS--------TPTKVKSKT----KRVSTQSGRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDH

Query:  HSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASEITG------
         SC+++M LI +A L  T+S+VGP+YP+LIRE  VN+P  F+NPSS DY T+HI G  F  S   ++ FLG T+  + SPS  T++ LA+ ++G      
Subjt:  HSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASEITG------

Query:  --------------------------DEAHG--------------------------------------------------PSPTKIQLSYRLFQGAHVP
                                    +H                                                   P P  I LSYRLFQG+HVP
Subjt:  --------------------------DEAHG--------------------------------------------------PSPTKIQLSYRLFQGAHVP

Query:  DIDHSFHPSSSTRP-NYDNLRSPVDGLLFPPSLANQVLHVLTSESRSISTLIHDLTDRRNEIDSVITSVQLLISSNPDAPAPQPPS
        DIDH  HP+   R  +  +     +G      LA ++++ LT+ESR+++  I  L++RR E+D++I  ++   SS P     QPPS
Subjt:  DIDHSFHPSSSTRP-NYDNLRSPVDGLLFPPSLANQVLHVLTSESRSISTLIHDLTDRRNEIDSVITSVQLLISSNPDAPAPQPPS

KAA0066044.1 uncharacterized protein E6C27_scaffold21G00170 [Cucumis melo var. makuwa]1.9e-4734.98Show/hide
Query:  TSSSSSQDNI--PLSRLLNHLSSNAVPAPSNS----DHHQSSASTP--TLDD---------HLTNPPPDSVSDPAPQST---PTKVKSKTKR-------V
        T  SSS + +  P+  +++   S+A P  ++S         S  TP   +DD         +   P  D+V   APQ T   PT+ K   K+       +
Subjt:  TSSSSSQDNI--PLSRLLNHLSSNAVPAPSNS----DHHQSSASTP--TLDD---------HLTNPPPDSVSDPAPQST---PTKVKSKTKR-------V

Query:  STQSGRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYH
        +T+ GR+++PL++  VPINGISFH E +V +WK+V+QRRIA E ++SD HHSC+++M LI +A L  T+S+VGP+YP+LIRE  VN+P  F++PSSP+Y 
Subjt:  STQSGRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYH

Query:  TIHIRGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASEITG--------------------------------------------------------
        T+HI+G  F+ SP  +N FLG  +  N SPS P +D LA  ++G                                                        
Subjt:  TIHIRGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASEITG--------------------------------------------------------

Query:  ----------------DEAHGPSPTKIQLSYRLFQGAHVPDIDHSFHPSSSTRP-NYDNLRSPVDGLLFPPSLANQVLHVLTSESRSISTLIHDLTDRRN
                         +A G  P  + LSYRLFQ +HVPDIDH  HPS   R  +  +     DG      LA+++L+ LT++SRS+ST I  +++RR 
Subjt:  ----------------DEAHGPSPTKIQLSYRLFQGAHVPDIDHSFHPSSSTRP-NYDNLRSPVDGLLFPPSLANQVLHVLTSESRSISTLIHDLTDRRN

Query:  EIDSVI
        EIDS+I
Subjt:  EIDSVI

XP_008454855.1 PREDICTED: uncharacterized protein LOC103495162 [Cucumis melo]1.1e-3931.42Show/hide
Query:  MVSTRRGYYSSQVPVPKKSVNPHVGPAVKNVRTNKHGVRLRGSSNVSSPPVSSAPLVSSSSSTTNTSTS----------SPVPSPPVNVPTVTSS-----
        MV+TR+G Y S   VP+            + R   HG+R+ G    S+ P     L S  +    +S S            V       P  + +     
Subjt:  MVSTRRGYYSSQVPVPKKSVNPHVGPAVKNVRTNKHGVRLRGSSNVSSPPVSSAPLVSSSSSTTNTSTS----------SPVPSPPVNVPTVTSS-----

Query:  -SSSQDNIPLSRLLNHLSS-NAVPAPSN----SDHHQSSAST-----PT-----LDDHLTNPPPDSVSDPAPQSTP---TKVKSKTKR-------VSTQS
         S   D++PL+RL+  +++ NAVP   N    SD  Q S+S+     PT     +D +      DSV   A Q TP   T+ K   K+       ++T+ 
Subjt:  -SSSQDNIPLSRLLNHLSS-NAVPAPSN----SDHHQSSAST-----PT-----LDDHLTNPPPDSVSDPAPQSTP---TKVKSKTKR-------VSTQS

Query:  GRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHI
        GR+++PL++  VPI+GI FH E +V  WK+++QRRIA E ++SD HHSC++++ LI++A L  T+S+VGP+YP+LIRE  VN+PT F++ SSPDY T+HI
Subjt:  GRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHI

Query:  RGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASEITG----------------------------------DEAHGPSPTKIQLSYRLFQG------
        RG  FS +   +N FLG  +  N +PS P++D LASE++G                                    A   S       YR+         
Subjt:  RGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASEITG----------------------------------DEAHGPSPTKIQLSYRLFQG------

Query:  -----------------------AHVPDIDHSFHPSSSTR----PNYDNLRSPVDGLLFPPSLANQVLHVLTSESRSISTLIHDLTDRRNEIDSVITSVQ
                               +HVPDIDH  HP+   R     ++D +    DG      LA+++L+ L +ESRS++T I  +++RR +IDS+I  ++
Subjt:  -----------------------AHVPDIDHSFHPSSSTR----PNYDNLRSPVDGLLFPPSLANQVLHVLTSESRSISTLIHDLTDRRNEIDSVITSVQ

Query:  LLISSN
            S+
Subjt:  LLISSN

XP_008465030.1 PREDICTED: uncharacterized protein LOC103502746 [Cucumis melo]2.0e-4132.69Show/hide
Query:  VGPAVKNVRTNKHGVRLRGSSNVSSPPVSSAPLVSSSSSTTNTSTSSPVPS-PPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPSNSDHHQSSASTP
        V PAV   R ++  V     S++ S    + PL+   +  +   T+  +PS PP ++ +  SSS+    IP     +   S A+ +  +S  H S +   
Subjt:  VGPAVKNVRTNKHGVRLRGSSNVSSPPVSSAPLVSSSSSTTNTSTSSPVPS-PPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPSNSDHHQSSASTP

Query:  TLDDHLTNPPPDSVSDP-----APQS--------TPTKVKSKT----KRVSTQSGRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDH
        T     T  PP+ +  P     AP S        +P   K KT    + V+T++ R+++P +V  VPI+GISFHHE  V  WK+V+Q+RI  E ++SD H
Subjt:  TLDDHLTNPPPDSVSDP-----APQS--------TPTKVKSKT----KRVSTQSGRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDH

Query:  HSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASEITG------
         SC+++M LI +A L  T+S+VGP+YP+LIRE  VN+P  F+NPSS DY T+HI G  F  S   ++ FLG T+  + SPS  T++ LA+ ++G      
Subjt:  HSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASEITG------

Query:  --------------------------DEAHG-----------------------------PSPTKIQLSYRLFQGAHVPDIDHSFHPSSSTRP-NYDNLR
                                    +H                              P P  I LSYRLFQG+HVPDIDH  HP+   R  +  +  
Subjt:  --------------------------DEAHG-----------------------------PSPTKIQLSYRLFQGAHVPDIDHSFHPSSSTRP-NYDNLR

Query:  SPVDGLLFPPSLANQVLHVLTSESRSISTLIHDLTDRRNEIDSVITSVQLLISSNPDAPAPQPPS
           +G      LA ++++ LT+ESR+++  I  L++RR E+D++I  ++   SS P     QPPS
Subjt:  SPVDGLLFPPSLANQVLHVLTSESRSISTLIHDLTDRRNEIDSVITSVQLLISSNPDAPAPQPPS

TrEMBL top hitse value%identityAlignment
A0A1S3BZ31 uncharacterized protein LOC1034951625.4e-4031.42Show/hide
Query:  MVSTRRGYYSSQVPVPKKSVNPHVGPAVKNVRTNKHGVRLRGSSNVSSPPVSSAPLVSSSSSTTNTSTS----------SPVPSPPVNVPTVTSS-----
        MV+TR+G Y S   VP+            + R   HG+R+ G    S+ P     L S  +    +S S            V       P  + +     
Subjt:  MVSTRRGYYSSQVPVPKKSVNPHVGPAVKNVRTNKHGVRLRGSSNVSSPPVSSAPLVSSSSSTTNTSTS----------SPVPSPPVNVPTVTSS-----

Query:  -SSSQDNIPLSRLLNHLSS-NAVPAPSN----SDHHQSSAST-----PT-----LDDHLTNPPPDSVSDPAPQSTP---TKVKSKTKR-------VSTQS
         S   D++PL+RL+  +++ NAVP   N    SD  Q S+S+     PT     +D +      DSV   A Q TP   T+ K   K+       ++T+ 
Subjt:  -SSSQDNIPLSRLLNHLSS-NAVPAPSN----SDHHQSSAST-----PT-----LDDHLTNPPPDSVSDPAPQSTP---TKVKSKTKR-------VSTQS

Query:  GRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHI
        GR+++PL++  VPI+GI FH E +V  WK+++QRRIA E ++SD HHSC++++ LI++A L  T+S+VGP+YP+LIRE  VN+PT F++ SSPDY T+HI
Subjt:  GRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHI

Query:  RGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASEITG----------------------------------DEAHGPSPTKIQLSYRLFQG------
        RG  FS +   +N FLG  +  N +PS P++D LASE++G                                    A   S       YR+         
Subjt:  RGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASEITG----------------------------------DEAHGPSPTKIQLSYRLFQG------

Query:  -----------------------AHVPDIDHSFHPSSSTR----PNYDNLRSPVDGLLFPPSLANQVLHVLTSESRSISTLIHDLTDRRNEIDSVITSVQ
                               +HVPDIDH  HP+   R     ++D +    DG      LA+++L+ L +ESRS++T I  +++RR +IDS+I  ++
Subjt:  -----------------------AHVPDIDHSFHPSSSTR----PNYDNLRSPVDGLLFPPSLANQVLHVLTSESRSISTLIHDLTDRRNEIDSVITSVQ

Query:  LLISSN
            S+
Subjt:  LLISSN

A0A1S3CMY0 uncharacterized protein LOC1035027469.8e-4232.69Show/hide
Query:  VGPAVKNVRTNKHGVRLRGSSNVSSPPVSSAPLVSSSSSTTNTSTSSPVPS-PPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPSNSDHHQSSASTP
        V PAV   R ++  V     S++ S    + PL+   +  +   T+  +PS PP ++ +  SSS+    IP     +   S A+ +  +S  H S +   
Subjt:  VGPAVKNVRTNKHGVRLRGSSNVSSPPVSSAPLVSSSSSTTNTSTSSPVPS-PPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPSNSDHHQSSASTP

Query:  TLDDHLTNPPPDSVSDP-----APQS--------TPTKVKSKT----KRVSTQSGRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDH
        T     T  PP+ +  P     AP S        +P   K KT    + V+T++ R+++P +V  VPI+GISFHHE  V  WK+V+Q+RI  E ++SD H
Subjt:  TLDDHLTNPPPDSVSDP-----APQS--------TPTKVKSKT----KRVSTQSGRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDH

Query:  HSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASEITG------
         SC+++M LI +A L  T+S+VGP+YP+LIRE  VN+P  F+NPSS DY T+HI G  F  S   ++ FLG T+  + SPS  T++ LA+ ++G      
Subjt:  HSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASEITG------

Query:  --------------------------DEAHG-----------------------------PSPTKIQLSYRLFQGAHVPDIDHSFHPSSSTRP-NYDNLR
                                    +H                              P P  I LSYRLFQG+HVPDIDH  HP+   R  +  +  
Subjt:  --------------------------DEAHG-----------------------------PSPTKIQLSYRLFQGAHVPDIDHSFHPSSSTRP-NYDNLR

Query:  SPVDGLLFPPSLANQVLHVLTSESRSISTLIHDLTDRRNEIDSVITSVQLLISSNPDAPAPQPPS
           +G      LA ++++ LT+ESR+++  I  L++RR E+D++I  ++   SS P     QPPS
Subjt:  SPVDGLLFPPSLANQVLHVLTSESRSISTLIHDLTDRRNEIDSVITSVQLLISSNPDAPAPQPPS

A0A5A7UQ31 Uncharacterized protein5.4e-4031.42Show/hide
Query:  MVSTRRGYYSSQVPVPKKSVNPHVGPAVKNVRTNKHGVRLRGSSNVSSPPVSSAPLVSSSSSTTNTSTS----------SPVPSPPVNVPTVTSS-----
        MV+TR+G Y S   VP+            + R   HG+R+ G    S+ P     L S  +    +S S            V       P  + +     
Subjt:  MVSTRRGYYSSQVPVPKKSVNPHVGPAVKNVRTNKHGVRLRGSSNVSSPPVSSAPLVSSSSSTTNTSTS----------SPVPSPPVNVPTVTSS-----

Query:  -SSSQDNIPLSRLLNHLSS-NAVPAPSN----SDHHQSSAST-----PT-----LDDHLTNPPPDSVSDPAPQSTP---TKVKSKTKR-------VSTQS
         S   D++PL+RL+  +++ NAVP   N    SD  Q S+S+     PT     +D +      DSV   A Q TP   T+ K   K+       ++T+ 
Subjt:  -SSSQDNIPLSRLLNHLSS-NAVPAPSN----SDHHQSSAST-----PT-----LDDHLTNPPPDSVSDPAPQSTP---TKVKSKTKR-------VSTQS

Query:  GRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHI
        GR+++PL++  VPI+GI FH E +V  WK+++QRRIA E ++SD HHSC++++ LI++A L  T+S+VGP+YP+LIRE  VN+PT F++ SSPDY T+HI
Subjt:  GRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHI

Query:  RGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASEITG----------------------------------DEAHGPSPTKIQLSYRLFQG------
        RG  FS +   +N FLG  +  N +PS P++D LASE++G                                    A   S       YR+         
Subjt:  RGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASEITG----------------------------------DEAHGPSPTKIQLSYRLFQG------

Query:  -----------------------AHVPDIDHSFHPSSSTR----PNYDNLRSPVDGLLFPPSLANQVLHVLTSESRSISTLIHDLTDRRNEIDSVITSVQ
                               +HVPDIDH  HP+   R     ++D +    DG      LA+++L+ L +ESRS++T I  +++RR +IDS+I  ++
Subjt:  -----------------------AHVPDIDHSFHPSSSTR----PNYDNLRSPVDGLLFPPSLANQVLHVLTSESRSISTLIHDLTDRRNEIDSVITSVQ

Query:  LLISSN
            S+
Subjt:  LLISSN

A0A5A7VFF7 Uncharacterized protein9.1e-4834.98Show/hide
Query:  TSSSSSQDNI--PLSRLLNHLSSNAVPAPSNS----DHHQSSASTP--TLDD---------HLTNPPPDSVSDPAPQST---PTKVKSKTKR-------V
        T  SSS + +  P+  +++   S+A P  ++S         S  TP   +DD         +   P  D+V   APQ T   PT+ K   K+       +
Subjt:  TSSSSSQDNI--PLSRLLNHLSSNAVPAPSNS----DHHQSSASTP--TLDD---------HLTNPPPDSVSDPAPQST---PTKVKSKTKR-------V

Query:  STQSGRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYH
        +T+ GR+++PL++  VPINGISFH E +V +WK+V+QRRIA E ++SD HHSC+++M LI +A L  T+S+VGP+YP+LIRE  VN+P  F++PSSP+Y 
Subjt:  STQSGRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYH

Query:  TIHIRGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASEITG--------------------------------------------------------
        T+HI+G  F+ SP  +N FLG  +  N SPS P +D LA  ++G                                                        
Subjt:  TIHIRGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASEITG--------------------------------------------------------

Query:  ----------------DEAHGPSPTKIQLSYRLFQGAHVPDIDHSFHPSSSTRP-NYDNLRSPVDGLLFPPSLANQVLHVLTSESRSISTLIHDLTDRRN
                         +A G  P  + LSYRLFQ +HVPDIDH  HPS   R  +  +     DG      LA+++L+ LT++SRS+ST I  +++RR 
Subjt:  ----------------DEAHGPSPTKIQLSYRLFQGAHVPDIDHSFHPSSSTRP-NYDNLRSPVDGLLFPPSLANQVLHVLTSESRSISTLIHDLTDRRN

Query:  EIDSVI
        EIDS+I
Subjt:  EIDSVI

A0A5D3B7L1 Gag-pol polyprotein9.8e-4235.31Show/hide
Query:  SSPVPSPPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPSNSDHHQSSASTPTLDDHLTNPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQ
        SSP+ SP   +P + +   S   +P +  +    ++A    +  D+          D +   P  D+V   A   P S PT++K   K+       ++T+
Subjt:  SSPVPSPPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPSNSDHHQSSASTPTLDDHLTNPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQ

Query:  SGRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIH
        +GR+++PL++  VPI+GISFH E ++H+WK+V+QRRIA E ++SD HHSC+++M LI +A+L  T+S+V P+YP+LIRE  VN+PT+ ++PSSPDY T+H
Subjt:  SGRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIH

Query:  IRGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASE--------------------------------------------------------------
        IRG  F+ SP  +N F+G  +  N SPS  ++D LASE                                                              
Subjt:  IRGLPFSFSPHSLNTFLGITLPSN-SPSLPTSDDLASE--------------------------------------------------------------

Query:  -ITGDEAHGPSPTKIQLSYRLFQGAHVPDIDHSFHPS
         +T  +A GP P  + LSYRLFQG+HVPDIDH  HPS
Subjt:  -ITGDEAHGPSPTKIQLSYRLFQGAHVPDIDHSFHPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGCACAAGACGAGGTTATTACTCTTCTCAAGTTCCTGTTCCTAAGAAATCTGTCAACCCACATGTTGGTCCCGCTGTAAAAAACGTGCGTACTAACAAACATGG
GGTCCGTTTGCGGGGTTCGTCCAACGTCTCCTCACCTCCTGTGTCTTCCGCTCCTCTGGTATCTTCTTCTTCTTCAACTACTAATACTTCTACCTCTTCTCCTGTTCCAT
CTCCCCCTGTTAATGTTCCTACAGTTACTTCTTCTTCCTCGTCTCAAGACAACATTCCTTTATCCCGCCTTCTTAATCACCTTTCCTCGAATGCTGTCCCTGCTCCTTCC
AATTCGGACCATCACCAGTCTTCTGCTTCCACTCCCACTCTTGATGATCATCTCACTAATCCTCCTCCTGATTCGGTTTCGGATCCTGCTCCTCAATCTACTCCAACCAA
AGTTAAATCCAAAACTAAAAGAGTGTCTACCCAGTCTGGTCGAAGACAGGTTCCTTTGCATGTGAATCCTGTTCCCATAAATGGCATCTCCTTTCATCATGAGTCTCATG
TCCATAAATGGAAATACGTGATTCAGAGACGTATTGCTGCAGAGTCAGATGTTTCTGATGATCATCATTCCTGCTTAGCTGTTATGACTCTAATTTCTCAAGCCAAACTT
CTGACCACTGTCTCTAATGTTGGCCCGTACTATCCCAAGCTGATAAGAGAAATGTTTGTCAACATTCCAACGTCTTTTGACAATCCTAGCAGTCCTGATTATCATACCAT
CCATATCAGAGGATTGCCCTTCTCCTTTTCCCCTCATTCCTTGAATACCTTTCTTGGTATTACTCTTCCTTCTAATTCTCCCTCTCTTCCTACCTCTGATGATCTTGCCT
CTGAGATAACAGGAGATGAAGCTCATGGCCCTTCTCCTACAAAAATTCAATTAAGTTATCGCCTCTTTCAAGGAGCTCATGTTCCTGACATTGACCATTCTTTTCATCCT
TCATCTTCCACTCGCCCAAACTATGACAATTTGAGATCTCCTGTTGATGGTTTGTTATTTCCTCCCTCTTTAGCCAATCAAGTCCTTCATGTTTTGACCTCTGAGTCTCG
CAGCATCAGCACTCTCATCCATGACCTCACAGACAGAAGAAACGAGATTGACTCTGTTATCACTTCTGTTCAGTTATTGATTTCTTCAAATCCTGATGCTCCTGCTCCTC
AACCTCCATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAGCACAAGACGAGGTTATTACTCTTCTCAAGTTCCTGTTCCTAAGAAATCTGTCAACCCACATGTTGGTCCCGCTGTAAAAAACGTGCGTACTAACAAACATGG
GGTCCGTTTGCGGGGTTCGTCCAACGTCTCCTCACCTCCTGTGTCTTCCGCTCCTCTGGTATCTTCTTCTTCTTCAACTACTAATACTTCTACCTCTTCTCCTGTTCCAT
CTCCCCCTGTTAATGTTCCTACAGTTACTTCTTCTTCCTCGTCTCAAGACAACATTCCTTTATCCCGCCTTCTTAATCACCTTTCCTCGAATGCTGTCCCTGCTCCTTCC
AATTCGGACCATCACCAGTCTTCTGCTTCCACTCCCACTCTTGATGATCATCTCACTAATCCTCCTCCTGATTCGGTTTCGGATCCTGCTCCTCAATCTACTCCAACCAA
AGTTAAATCCAAAACTAAAAGAGTGTCTACCCAGTCTGGTCGAAGACAGGTTCCTTTGCATGTGAATCCTGTTCCCATAAATGGCATCTCCTTTCATCATGAGTCTCATG
TCCATAAATGGAAATACGTGATTCAGAGACGTATTGCTGCAGAGTCAGATGTTTCTGATGATCATCATTCCTGCTTAGCTGTTATGACTCTAATTTCTCAAGCCAAACTT
CTGACCACTGTCTCTAATGTTGGCCCGTACTATCCCAAGCTGATAAGAGAAATGTTTGTCAACATTCCAACGTCTTTTGACAATCCTAGCAGTCCTGATTATCATACCAT
CCATATCAGAGGATTGCCCTTCTCCTTTTCCCCTCATTCCTTGAATACCTTTCTTGGTATTACTCTTCCTTCTAATTCTCCCTCTCTTCCTACCTCTGATGATCTTGCCT
CTGAGATAACAGGAGATGAAGCTCATGGCCCTTCTCCTACAAAAATTCAATTAAGTTATCGCCTCTTTCAAGGAGCTCATGTTCCTGACATTGACCATTCTTTTCATCCT
TCATCTTCCACTCGCCCAAACTATGACAATTTGAGATCTCCTGTTGATGGTTTGTTATTTCCTCCCTCTTTAGCCAATCAAGTCCTTCATGTTTTGACCTCTGAGTCTCG
CAGCATCAGCACTCTCATCCATGACCTCACAGACAGAAGAAACGAGATTGACTCTGTTATCACTTCTGTTCAGTTATTGATTTCTTCAAATCCTGATGCTCCTGCTCCTC
AACCTCCATCTTAA
Protein sequenceShow/hide protein sequence
MVSTRRGYYSSQVPVPKKSVNPHVGPAVKNVRTNKHGVRLRGSSNVSSPPVSSAPLVSSSSSTTNTSTSSPVPSPPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPS
NSDHHQSSASTPTLDDHLTNPPPDSVSDPAPQSTPTKVKSKTKRVSTQSGRRQVPLHVNPVPINGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKL
LTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSNSPSLPTSDDLASEITGDEAHGPSPTKIQLSYRLFQGAHVPDIDHSFHP
SSSTRPNYDNLRSPVDGLLFPPSLANQVLHVLTSESRSISTLIHDLTDRRNEIDSVITSVQLLISSNPDAPAPQPPS