; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0028872 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028872
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionActin-related protein 2/3 complex subunit 5
Genome locationchr03:25356688..25361129
RNA-Seq ExpressionPI0028872
SyntenyPI0028872
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR006789 - Actin-related protein 2/3 complex subunit 5
IPR036743 - Actin-related protein 2/3 complex subunit 5 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138489.1 actin-related protein 2/3 complex subunit 5A [Cucumis sativus]4.9e-6997.78Show/hide
Query:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MATTC+FVEADNAEAIITRIEHKSRKIESLLKQ KPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADT+NTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV

XP_008441367.1 PREDICTED: actin-related protein 2/3 complex subunit 5A [Cucumis melo]3.4e-70100Show/hide
Query:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV

XP_010089302.1 actin-related protein 2/3 complex subunit 5A [Morus notabilis]3.5e-6797.04Show/hide
Query:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MA T  FVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADT+NTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV

XP_022133485.1 actin-related protein 2/3 complex subunit 5A [Momordica charantia]3.5e-6796.3Show/hide
Query:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MA   EFVEADNAEAIITRIEHKSRKIESLLKQS+PVEALKTALEGSPPNTRDERCKSANWI VHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV

XP_038884940.1 actin-related protein 2/3 complex subunit 5A [Benincasa hispida]1.9e-6898.52Show/hide
Query:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MATT EFVEADNAEAIITRIEHKSRKIESLLKQS+PVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV

TrEMBL top hitse value%identityAlignment
A0A0A0KD59 Actin-related protein 2/3 complex subunit 52.4e-6997.78Show/hide
Query:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MATTC+FVEADNAEAIITRIEHKSRKIESLLKQ KPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADT+NTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV

A0A1S3B407 Actin-related protein 2/3 complex subunit 51.7e-70100Show/hide
Query:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV

A0A6J1BVD6 Actin-related protein 2/3 complex subunit 51.7e-6796.3Show/hide
Query:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MA   EFVEADNAEAIITRIEHKSRKIESLLKQS+PVEALKTALEGSPPNTRDERCKSANWI VHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV

A0A6P4A354 Actin-related protein 2/3 complex subunit 52.9e-6796.3Show/hide
Query:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MA T EFVEADNAEAIITRIEHKSRKIESLLKQ KPVEALKTALEGSPPNTRDERCKSANWIVVHRA+MAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADT+NTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV

W9R3V7 Actin-related protein 2/3 complex subunit 51.7e-6797.04Show/hide
Query:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MA T  FVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADT+NTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV

SwissProt top hitse value%identityAlignment
B3H6Y2 Actin-related protein 2/3 complex subunit 5B8.5e-5679.26Show/hide
Query:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MA    FVEADNAE I+ RIE KS+KIESLLK  K VEALKTAL+GSPP T DERCKSANWIVVHRA+MAIKD++GM +SL  EYYDILMKYLYRGLSTG
Subjt:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
        D PTC+QCL IHEKLTERAGLGCILR L+DT NTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV

O15511 Actin-related protein 2/3 complex subunit 52.7e-0932.38Show/hide
Query:  KIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC
        +++S L+Q     AL+ AL+  P NT+ +  K     +V + L++ K  D++    SLD    D+LMKY+Y+G  +    +    L+ HEK     G+G 
Subjt:  KIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC

Query:  ILRSL
        I+R L
Subjt:  ILRSL

Q5R516 Actin-related protein 2/3 complex subunit 52.7e-0932.38Show/hide
Query:  KIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC
        +++S L+Q     AL+ AL+  P NT+ +  K     +V + L++ K  D++    SLD    D+LMKY+Y+G  +    +    L+ HEK     G+G 
Subjt:  KIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC

Query:  ILRSL
        I+R L
Subjt:  ILRSL

Q6DE18 Actin-related protein 2/3 complex subunit 5-B2.0e-0931.43Show/hide
Query:  KIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC
        +++SL++Q + + A ++AL  SP N++++  K     +V + L + K  +++   ++LDP   D+LMKY+Y+G       +    L+ HEK     GLG 
Subjt:  KIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC

Query:  ILRSL
        I+R L
Subjt:  ILRSL

Q9M117 Actin-related protein 2/3 complex subunit 5A1.0e-6190Show/hide
Query:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC
        EFVEADNAEAII RIE KSRKIESLLKQ K VEALKTALEGSPP TRDERCKSANWIVVHRALMAIKD+DGM ++LD EYYDILMKYLYRGLSTGDRPTC
Subjt:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC

Query:  DQCLRIHEKLTERAGLGCILRSLADTINTV
        DQCL+IHEKLTERAGLGCILR L DTINTV
Subjt:  DQCLRIHEKLTERAGLGCILRSLADTINTV

Arabidopsis top hitse value%identityAlignment
AT4G01710.1 ARP2/3 complex 16 kDa subunit (p16-Arc)7.3e-6390Show/hide
Query:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC
        EFVEADNAEAII RIE KSRKIESLLKQ K VEALKTALEGSPP TRDERCKSANWIVVHRALMAIKD+DGM ++LD EYYDILMKYLYRGLSTGDRPTC
Subjt:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC

Query:  DQCLRIHEKLTERAGLGCILRSLADTINTV
        DQCL+IHEKLTERAGLGCILR L DTINTV
Subjt:  DQCLRIHEKLTERAGLGCILRSLADTINTV

AT5G65274.1 ARP2/3 complex 16 kDa subunit (p16-Arc)6.0e-5779.26Show/hide
Query:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MA    FVEADNAE I+ RIE KS+KIESLLK  K VEALKTAL+GSPP T DERCKSANWIVVHRA+MAIKD++GM +SL  EYYDILMKYLYRGLSTG
Subjt:  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
        D PTC+QCL IHEKLTERAGLGCILR L+DT NTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTACATGTGAATTTGTGGAAGCAGATAATGCAGAAGCCATAATCACCAGAATTGAGCACAAATCTCGAAAGATCGAGAGCTTACTTAAACAGTCTAAACCAGT
CGAAGCTCTTAAAACTGCTCTTGAAGGTTCCCCTCCAAATACCCGAGATGAGCGCTGTAAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTCATGGCTATAAAGGATG
TAGATGGGATGTTTTCTTCGCTGGATCCAGAGTACTATGATATTCTAATGAAGTACTTGTATAGAGGGTTGTCTACTGGTGATCGTCCCACATGTGATCAATGTCTCAGG
ATACATGAAAAGTTGACAGAAAGGGCTGGCTTAGGCTGCATTCTTCGTTCTCTTGCCGATACTATTAATACTGTTTGA
mRNA sequenceShow/hide mRNA sequence
AAATATTGAAATAAAATTTATTACAAAAAAAGAAAAAAAAAACCATCGCAACTCAAAGACCGAAATCAAAAGACCATTCGGCGGCGAGAAAACTTCCCAGCTCTTCTTTT
CACAAATCACAAATCTCATTTAGCTCCGATTTCATTCATACAACTGATGGGTTATCGATCTGTATTGGTATGATCAGTTTTCAGTTAAGCTCGAGTTAATCCTACTGGAA
GTAGGTTGATACCGCAAGGCGAAAATGGCGACTACATGTGAATTTGTGGAAGCAGATAATGCAGAAGCCATAATCACCAGAATTGAGCACAAATCTCGAAAGATCGAGAG
CTTACTTAAACAGTCTAAACCAGTCGAAGCTCTTAAAACTGCTCTTGAAGGTTCCCCTCCAAATACCCGAGATGAGCGCTGTAAGTCAGCAAATTGGATTGTGGTGCATA
GGGCTCTCATGGCTATAAAGGATGTAGATGGGATGTTTTCTTCGCTGGATCCAGAGTACTATGATATTCTAATGAAGTACTTGTATAGAGGGTTGTCTACTGGTGATCGT
CCCACATGTGATCAATGTCTCAGGATACATGAAAAGTTGACAGAAAGGGCTGGCTTAGGCTGCATTCTTCGTTCTCTTGCCGATACTATTAATACTGTTTGATTTTTCTT
TTGAGCAACTTTTGGCTAATGTTGGATATATGTCATACTAAGAGCTGAAATTTACTCAATTCTATCGAGTTTTGACACACCTGTAAATTGCTTTTCAGATTGTGGATTTA
TGTCAACCAGATTTAATTTCTAATTGTACTTTGTAATTTGTAATTTGAACAATTGAATGTAGATGACTGAAATAGAATATAACATATGGACTGTACAAAGTTAGAGCGTG
GATTTAGTGACTGTAATACCA
Protein sequenceShow/hide protein sequence
MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLR
IHEKLTERAGLGCILRSLADTINTV