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PI0028885 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028885
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 297 family
Genome locationchr03:21080645..21082000
RNA-Seq ExpressionPI0028885
SyntenyPI0028885
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042324.1 Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa]3.7e-2959.69Show/hide
Query:  DTIESSETLEKHDEFNELIDRATLENVDNEF--GKPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDN
        DT+ES + LE+HD+FNELID+ATLE+V+NEF   KPSDDDLS FLDFVTS+N+E+ LVD+  T E H   N+F +SN+HD  R++K D E ILK+IVI+N
Subjt:  DTIESSETLEKHDEFNELIDRATLENVDNEF--GKPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDN

Query:  DDNKNSHIKNLEKGN----DSCEIYLHKE
        D + + HIKN EK N    D CE+ LHKE
Subjt:  DDNKNSHIKNLEKGN----DSCEIYLHKE

KAA0063162.1 hypothetical protein E6C27_scaffold381G00430 [Cucumis melo var. makuwa]3.9e-2658.47Show/hide
Query:  DTIESSETLEKHDEFNELIDRATLENVDNEF--GKPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDN
        +T ES ETLEKHD+F+ELID+ATLE V+NEF   KPSDDD+S FLDF  S+N+EH LVD+  T E H L N+FA SN+HDL R++K DDE ILK+I I+N
Subjt:  DTIESSETLEKHDEFNELIDRATLENVDNEF--GKPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDN

Query:  DDNKNSHIKNLEKGNDSC
        D + + HIK       +C
Subjt:  DDNKNSHIKNLEKGNDSC

KAA0065429.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]2.8e-2467.68Show/hide
Query:  ENVDNEFG--KPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDNDDNKNSHIKNLEK----GNDSCE
        ++VDNEF   KP+DDDLS FL+FVTSIN+EHALVD+ TT E HAL NNF +SN+HDL RD+K DDEQILK+I IDND + N+HIKN EK     NDSCE
Subjt:  ENVDNEFG--KPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDNDDNKNSHIKNLEK----GNDSCE

KAA0066481.1 Retrotransposon gag protein [Cucumis melo var. makuwa]6.8e-2362.38Show/hide
Query:  DTIESSETLEKHDEFNELIDRATLENVDNEF--GKPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDN
        DTIES +TL++HD FN+LI++ATLE +DNEF   KPSDDDLS FLDFV S+N+EH LVD+  T E H L N+FA+SN+HDL R++  DDE  LK I I+N
Subjt:  DTIESSETLEKHDEFNELIDRATLENVDNEF--GKPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDN

Query:  D
        D
Subjt:  D

KAE8647060.1 hypothetical protein Csa_022980 [Cucumis sativus]1.8e-3162.31Show/hide
Query:  DTIESSETLEKHDEFNELIDRATLENVDNEFG--KPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDN
        DT+ES ETLE+ D+ NELID+ATLE VDNEF   KPSDDDLS FL+FV SIN+EHALVD+ TT + HAL NNFA+S + DL RD+K +DEQ LK I IDN
Subjt:  DTIESSETLEKHDEFNELIDRATLENVDNEFG--KPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDN

Query:  DDNKNSHIKNLEK-----GNDSCEIYLHKE
        + + + HI+ L+K      ND CE+YLHKE
Subjt:  DDNKNSHIKNLEK-----GNDSCEIYLHKE

TrEMBL top hitse value%identityAlignment
A0A5A7TE46 Uncharacterized protein1.4e-2158.1Show/hide
Query:  DTIESSETLEKHDEFNELIDRATLENVDNEFGKP--SDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDN
        DT+ES +T E+HD+FNELID+ TLE V+NEF K   SDDD S FLDF  S+N+EHALVD+  T  HHAL N+FA+SN+H L R++  D+E  LK I I+N
Subjt:  DTIESSETLEKHDEFNELIDRATLENVDNEFGKP--SDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDN

Query:  DDNKN
        D   N
Subjt:  DDNKN

A0A5A7V4I7 Uncharacterized protein1.9e-2658.47Show/hide
Query:  DTIESSETLEKHDEFNELIDRATLENVDNEF--GKPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDN
        +T ES ETLEKHD+F+ELID+ATLE V+NEF   KPSDDD+S FLDF  S+N+EH LVD+  T E H L N+FA SN+HDL R++K DDE ILK+I I+N
Subjt:  DTIESSETLEKHDEFNELIDRATLENVDNEF--GKPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDN

Query:  DDNKNSHIKNLEKGNDSC
        D + + HIK       +C
Subjt:  DDNKNSHIKNLEKGNDSC

A0A5A7VIZ2 Retrovirus-related Pol polyprotein from transposon 17.61.3e-2467.68Show/hide
Query:  ENVDNEFG--KPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDNDDNKNSHIKNLEK----GNDSCE
        ++VDNEF   KP+DDDLS FL+FVTSIN+EHALVD+ TT E HAL NNF +SN+HDL RD+K DDEQILK+I IDND + N+HIKN EK     NDSCE
Subjt:  ENVDNEFG--KPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDNDDNKNSHIKNLEK----GNDSCE

A0A5D3CW21 Retrovirus-related Pol polyprotein from transposon 297 family1.8e-2959.69Show/hide
Query:  DTIESSETLEKHDEFNELIDRATLENVDNEF--GKPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDN
        DT+ES + LE+HD+FNELID+ATLE+V+NEF   KPSDDDLS FLDFVTS+N+E+ LVD+  T E H   N+F +SN+HD  R++K D E ILK+IVI+N
Subjt:  DTIESSETLEKHDEFNELIDRATLENVDNEF--GKPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDN

Query:  DDNKNSHIKNLEKGN----DSCEIYLHKE
        D + + HIKN EK N    D CE+ LHKE
Subjt:  DDNKNSHIKNLEKGN----DSCEIYLHKE

A0A5D3DU65 Retrotransposon gag protein3.3e-2362.38Show/hide
Query:  DTIESSETLEKHDEFNELIDRATLENVDNEF--GKPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDN
        DTIES +TL++HD FN+LI++ATLE +DNEF   KPSDDDLS FLDFV S+N+EH LVD+  T E H L N+FA+SN+HDL R++  DDE  LK I I+N
Subjt:  DTIESSETLEKHDEFNELIDRATLENVDNEF--GKPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDN

Query:  D
        D
Subjt:  D

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCATCTATTTTTGAGTTAGGAGATACTATAGAATCATCAGAAACTTTAGAAAAGCATGATGAATTCAATGAGCTAATAGATCGAGCAACTCTAGAAAATGTTGA
TAATGAATTTGGTAAACCTAGTGATGATGATCTTTCTACCTTCCTTGACTTTGTTACTAGTATAAATGAAGAGCATGCTTTAGTTGATAGTTTTACAACACTTGAACATC
ATGCTTTAGCTAATAATTTTGCAACTAGTAACAAACATGATCTAGAAAGAGATATGAAGTATGATGATGAGCAAATTTTGAAAACCATTGTCATTGATAATGATGATAAC
AAAAACTCCCACATAAAAAACCTTGAAAAAGGGAATGATTCTTGTGAAATTTATTTGCATAAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCATCTATTTTTGAGTTAGGAGATACTATAGAATCATCAGAAACTTTAGAAAAGCATGATGAATTCAATGAGCTAATAGATCGAGCAACTCTAGAAAATGTTGA
TAATGAATTTGGTAAACCTAGTGATGATGATCTTTCTACCTTCCTTGACTTTGTTACTAGTATAAATGAAGAGCATGCTTTAGTTGATAGTTTTACAACACTTGAACATC
ATGCTTTAGCTAATAATTTTGCAACTAGTAACAAACATGATCTAGAAAGAGATATGAAGTATGATGATGAGCAAATTTTGAAAACCATTGTCATTGATAATGATGATAAC
AAAAACTCCCACATAAAAAACCTTGAAAAAGGGAATGATTCTTGTGAAATTTATTTGCATAAAGAATGA
Protein sequenceShow/hide protein sequence
MKASIFELGDTIESSETLEKHDEFNELIDRATLENVDNEFGKPSDDDLSTFLDFVTSINEEHALVDSFTTLEHHALANNFATSNKHDLERDMKYDDEQILKTIVIDNDDN
KNSHIKNLEKGNDSCEIYLHKE