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PI0028889 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028889
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr08:7003448..7003633
RNA-Seq ExpressionPI0028889
SyntenyPI0028889
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047075.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-1877.05Show/hide
Query:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI
        MASSSR PKH WTKEEE  LVE LVELV+AGGW+ DNGTFR GYL+QL +MMA K+PGCNI
Subjt:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI

KAA0047509.1 retrotransposon protein [Cucumis melo var. makuwa]2.3e-1875.41Show/hide
Query:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI
        M SSSR PKH WTKEEE+ LVE LVELV+AGGW+ DNGTFR GYL+QL +MMA K+PGCNI
Subjt:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI

KAA0066605.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-1878.69Show/hide
Query:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI
        MASSSRAPKH WTKEEE  LVE LVELVSAGGW+ +NGTFR GYL QLQ+MMAEK+P  NI
Subjt:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI

TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-1877.05Show/hide
Query:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI
        MASSSR PKH WTKEEE  LVE LVELV+AGGW+ DNGTFR GYL+QL +MMA K+PGCNI
Subjt:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI

XP_031739738.1 uncharacterized protein LOC116403265 [Cucumis sativus]1.8e-1873.77Show/hide
Query:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI
        M SSSRAPKH+WTKEEE  LVE +VELVSAGGWK +NGTFR GYL QL ++MA K+PGCN+
Subjt:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI

TrEMBL top hitse value%identityAlignment
A0A5A7U098 Retrotransposon protein6.6e-1977.05Show/hide
Query:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI
        MASSSR PKH WTKEEE  LVE LVELV+AGGW+ DNGTFR GYL+QL +MMA K+PGCNI
Subjt:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI

A0A5A7U216 Retrotransposon protein1.1e-1875.41Show/hide
Query:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI
        M SSSR PKH WTKEEE+ LVE LVELV+AGGW+ DNGTFR GYL+QL +MMA K+PGCNI
Subjt:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI

A0A5D3BZU3 Retrotransposon protein1.5e-1878.69Show/hide
Query:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI
        MASSSRA KH WTKEEE  LVE LVELVSAGGW+ DNGTFR GYL QLQ+MMAEK+P  NI
Subjt:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI

A0A5D3C1M0 Retrotransposon protein6.6e-1977.05Show/hide
Query:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI
        MASSSR PKH WTKEEE  LVE LVELV+AGGW+ DNGTFR GYL+QL +MMA K+PGCNI
Subjt:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI

A0A5D3CQS4 Retrotransposon protein8.7e-1978.69Show/hide
Query:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI
        MASSSRAPKH WTKEEE  LVE LVELVSAGGW+ +NGTFR GYL QLQ+MMAEK+P  NI
Subjt:  MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTTCCTCCCGGGCCCCCAAACACATTTGGACGAAGGAGGAAGAGTTATACCTGGTCGAGGCCTTGGTGGAGTTGGTATCTGCCGGTGGCTGGAAGTTAGATAA
CGGTACCTTCCGTCTTGGGTACCTGGATCAGCTACAAAAAATGATGGCAGAGAAGATGCCTGGATGTAACATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTTCCTCCCGGGCCCCCAAACACATTTGGACGAAGGAGGAAGAGTTATACCTGGTCGAGGCCTTGGTGGAGTTGGTATCTGCCGGTGGCTGGAAGTTAGATAA
CGGTACCTTCCGTCTTGGGTACCTGGATCAGCTACAAAAAATGATGGCAGAGAAGATGCCTGGATGTAACATCTAG
Protein sequenceShow/hide protein sequence
MASSSRAPKHIWTKEEELYLVEALVELVSAGGWKLDNGTFRLGYLDQLQKMMAEKMPGCNI