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PI0028902 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028902
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr03:11174621..11175454
RNA-Seq ExpressionPI0028902
SyntenyPI0028902
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048280.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-3360.48Show/hide
Query:  SHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAYDGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRGGQ
        SHP AKGLLNK F HYD+L Y+FG+D A GG AE+F D+GSN P GYD F A D +D +F  MYS GL+MSPDD+M TR +R+SE R  SSGSKRKR G 
Subjt:  SHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAYDGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRGGQ

Query:  AFETIEIIRSVMEYANDQLKAIVE
        A ++ +I+R+ MEY N+QL  I E
Subjt:  AFETIEIIRSVMEYANDQLKAIVE

KAA0048374.1 retrotransposon protein [Cucumis melo var. makuwa]6.8e-3660.48Show/hide
Query:  SHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAYDGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRGGQ
        SHP AKGLLNK FPHYD+L Y+F +D A GG AE+F DVGSN PTGYD F A   +D +F  MYS+GL+MSPD++MGTR +R+SEGR  SSGSK+KRGG 
Subjt:  SHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAYDGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRGGQ

Query:  AFETIEIIRSVMEYANDQLKAIVE
          ++ +I+R+ +EY N+QL  I E
Subjt:  AFETIEIIRSVMEYANDQLKAIVE

KAA0054147.1 retrotransposon protein [Cucumis melo var. makuwa]1.9e-3360.48Show/hide
Query:  SHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAYDGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRGGQ
        SHP AKGLLNK F HYD+L Y+FG+D A GG AE+FVD+GSN P GYD F A    D++FP MYS GL+MSPDD+M TR +R+SE R  SSGSKRKR G 
Subjt:  SHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAYDGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRGGQ

Query:  AFETIEIIRSVMEYANDQLKAIVE
        A ++ +I+R+ +EY N+QL  I E
Subjt:  AFETIEIIRSVMEYANDQLKAIVE

KAA0056167.1 retrotransposon protein [Cucumis melo var. makuwa]5.2e-3664Show/hide
Query:  FSHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAYDGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRGG
        FSH VAKG+LN+ F HYD+LCY+FGRD   GG  ETFV+VGSNV  GY+GF   DGND+E P+MYSQGLDMS DDIMGTR  + S+GR  SS SKRK  G
Subjt:  FSHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAYDGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRGG

Query:  QAFETIEIIRSVMEYANDQLKAIVE
        Q  ET++II + +EY NDQL  IV+
Subjt:  QAFETIEIIRSVMEYANDQLKAIVE

KAA0061395.1 retrotransposon protein [Cucumis melo var. makuwa]4.0e-3664.29Show/hide
Query:  FSHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAY-DGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRG
        +SHPVA GLLN+ FPHY++LCY+FGRDCA GG  ETFVDV SNV   Y+G  +  DGN++E PTMYSQGLDMSP+DIMGTR  R S  R  SS  KRKRG
Subjt:  FSHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAY-DGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRG

Query:  GQAFETIEIIRSVMEYANDQLKAIVE
        GQ+ E  ++I SVMEY NDQL   V+
Subjt:  GQAFETIEIIRSVMEYANDQLKAIVE

TrEMBL top hitse value%identityAlignment
A0A5A7TYQ6 Retrotransposon protein5.3e-3460.48Show/hide
Query:  SHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAYDGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRGGQ
        SHP AKGLLNK F HYD+L Y+FG+D A GG AE+F D+GSN P GYD F A D +D +F  MYS GL+MSPDD+M TR +R+SE R  SSGSKRKR G 
Subjt:  SHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAYDGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRGGQ

Query:  AFETIEIIRSVMEYANDQLKAIVE
        A ++ +I+R+ MEY N+QL  I E
Subjt:  AFETIEIIRSVMEYANDQLKAIVE

A0A5A7TZA5 Retrotransposon protein3.3e-3660.48Show/hide
Query:  SHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAYDGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRGGQ
        SHP AKGLLNK FPHYD+L Y+F +D A GG AE+F DVGSN PTGYD F A   +D +F  MYS+GL+MSPD++MGTR +R+SEGR  SSGSK+KRGG 
Subjt:  SHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAYDGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRGGQ

Query:  AFETIEIIRSVMEYANDQLKAIVE
          ++ +I+R+ +EY N+QL  I E
Subjt:  AFETIEIIRSVMEYANDQLKAIVE

A0A5A7UHV9 Retrotransposon protein9.0e-3460.48Show/hide
Query:  SHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAYDGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRGGQ
        SHP AKGLLNK F HYD+L Y+FG+D A GG AE+FVD+GSN P GYD F A    D++FP MYS GL+MSPDD+M TR +R+SE R  SSGSKRKR G 
Subjt:  SHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAYDGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRGGQ

Query:  AFETIEIIRSVMEYANDQLKAIVE
        A ++ +I+R+ +EY N+QL  I E
Subjt:  AFETIEIIRSVMEYANDQLKAIVE

A0A5A7UNI7 Retrotransposon protein2.5e-3664Show/hide
Query:  FSHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAYDGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRGG
        FSH VAKG+LN+ F HYD+LCY+FGRD   GG  ETFV+VGSNV  GY+GF   DGND+E P+MYSQGLDMS DDIMGTR  + S+GR  SS SKRK  G
Subjt:  FSHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAYDGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRGG

Query:  QAFETIEIIRSVMEYANDQLKAIVE
        Q  ET++II + +EY NDQL  IV+
Subjt:  QAFETIEIIRSVMEYANDQLKAIVE

A0A5D3CX17 Retrotransposon protein1.9e-3664.29Show/hide
Query:  FSHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAY-DGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRG
        +SHPVA GLLN+ FPHY++LCY+FGRDCA GG  ETFVDV SNV   Y+G  +  DGN++E PTMYSQGLDMSP+DIMGTR  R S  R  SS  KRKRG
Subjt:  FSHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAY-DGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRG

Query:  GQAFETIEIIRSVMEYANDQLKAIVE
        GQ+ E  ++I SVMEY NDQL   V+
Subjt:  GQAFETIEIIRSVMEYANDQLKAIVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTTGTTTAGTCATCCAGTCGCAAAGGGCCTCCTAAACAAACCATTTCCCCATTACGACGACCTATGCTACATCTTTGGAAGAGATTGTGCAATAGGAGGTTGCGC
TGAAACCTTTGTCGATGTTGGGTCGAACGTGCCTACAGGGTATGATGGATTTCCCGCTTATGATGGGAACGATATGGAGTTTCCCACGATGTACAGTCAGGGACTGGACA
TGTCACCTGACGATATAATGGGTACACGACTCAGTCGGTTGTCTGAGGGTAGGGTTGGTTCGAGTGGTTCGAAGAGGAAACGAGGAGGGCAGGCGTTCGAGACGATAGAA
ATTATTCGCAGTGTCATGGAATATGCGAATGACCAGCTAAAGGCCATTGTAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTTGTTTAGTCATCCAGTCGCAAAGGGCCTCCTAAACAAACCATTTCCCCATTACGACGACCTATGCTACATCTTTGGAAGAGATTGTGCAATAGGAGGTTGCGC
TGAAACCTTTGTCGATGTTGGGTCGAACGTGCCTACAGGGTATGATGGATTTCCCGCTTATGATGGGAACGATATGGAGTTTCCCACGATGTACAGTCAGGGACTGGACA
TGTCACCTGACGATATAATGGGTACACGACTCAGTCGGTTGTCTGAGGGTAGGGTTGGTTCGAGTGGTTCGAAGAGGAAACGAGGAGGGCAGGCGTTCGAGACGATAGAA
ATTATTCGCAGTGTCATGGAATATGCGAATGACCAGCTAAAGGCCATTGTAGAATGA
Protein sequenceShow/hide protein sequence
MLLFSHPVAKGLLNKPFPHYDDLCYIFGRDCAIGGCAETFVDVGSNVPTGYDGFPAYDGNDMEFPTMYSQGLDMSPDDIMGTRLSRLSEGRVGSSGSKRKRGGQAFETIE
IIRSVMEYANDQLKAIVE