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PI0028905 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028905
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr03:12483920..12484718
RNA-Seq ExpressionPI0028905
SyntenyPI0028905
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038296.1 hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]4.6e-0738.71Show/hide
Query:  DPLTDFPTDPAASPKIAIFSETTKDQSAAALVPVRSPIKESKEYV--DDLLPYEQAKAEAAGEISNPSPPAQTSNQ-PSAVEEGDNDEYYQFLGEAFGKL
        D +TD   DP          +  K+    +LVPV SP KE  E V  D LL  +   ++ A E   PSPP +TS Q  +A E  D DEY++F+   FGK 
Subjt:  DPLTDFPTDPAASPKIAIFSETTKDQSAAALVPVRSPIKESKEYV--DDLLPYEQAKAEAAGEISNPSPPAQTSNQ-PSAVEEGDNDEYYQFLGEAFGKL

Query:  VMDAFDDVFASQADLQERLMKHQK
        + D F+D+F  QA+ QE  ++ QK
Subjt:  VMDAFDDVFASQADLQERLMKHQK

KAA0047490.1 hypothetical protein E6C27_scaffold498G001090 [Cucumis melo var. makuwa]3.3e-0550.85Show/hide
Query:  NDEYYQFLGEAFGKLVMDAFDDVFASQADLQERLMKHQKQLQDLDLKIDNNANNHQSQI
        +DEY++F+   FGK + D F+D+F  QA+LQE  M+ QKQLQ+L+L+IDN    HQ+Q+
Subjt:  NDEYYQFLGEAFGKLVMDAFDDVFASQADLQERLMKHQKQLQDLDLKIDNNANNHQSQI

KAA0047757.1 hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa]2.6e-1053.09Show/hide
Query:  GEISNPSPPAQTSN-QPSAVEEGDN-DEYYQFLGEAFGKLVMDAFDDVFASQADLQERLMKHQKQLQDLDLKIDNNANNHQ
        GE   P P  Q +N Q +A  E DN D Y++F+G+ FGK VMD F DVF +Q DLQE   +H+KQ+QDL+LKIDN   +HQ
Subjt:  GEISNPSPPAQTSN-QPSAVEEGDN-DEYYQFLGEAFGKLVMDAFDDVFASQADLQERLMKHQKQLQDLDLKIDNNANNHQ

TYK19850.1 hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa]1.0e-0637.1Show/hide
Query:  DPLTDFPTDPAASPKIAIFSETTKDQSAAALVPVRSPIKESKEYV--DDLLPYEQAKAEAAGEISNPSPPAQTSNQPSAVEEGD-NDEYYQFLGEAFGKL
        D +TD   DP          +  K+    +LVPV SP KE  E V  D LL  +   ++ A E   PSPP +TS Q    +E D  DEY++F+   FGK 
Subjt:  DPLTDFPTDPAASPKIAIFSETTKDQSAAALVPVRSPIKESKEYV--DDLLPYEQAKAEAAGEISNPSPPAQTSNQPSAVEEGD-NDEYYQFLGEAFGKL

Query:  VMDAFDDVFASQADLQERLMKHQK
        + D F+D+F  QA+ QE  ++ +K
Subjt:  VMDAFDDVFASQADLQERLMKHQK

TYK26456.1 hypothetical protein E5676_scaffold313G00130 [Cucumis melo var. makuwa]3.3e-0550.85Show/hide
Query:  NDEYYQFLGEAFGKLVMDAFDDVFASQADLQERLMKHQKQLQDLDLKIDNNANNHQSQI
        +DEY++F+   FGK + D F+D+F  QA+LQE  M+ QKQLQ+L+L+IDN    HQ+Q+
Subjt:  NDEYYQFLGEAFGKLVMDAFDDVFASQADLQERLMKHQKQLQDLDLKIDNNANNHQSQI

TrEMBL top hitse value%identityAlignment
A0A5A7T7V1 Uncharacterized protein2.2e-0738.71Show/hide
Query:  DPLTDFPTDPAASPKIAIFSETTKDQSAAALVPVRSPIKESKEYV--DDLLPYEQAKAEAAGEISNPSPPAQTSNQ-PSAVEEGDNDEYYQFLGEAFGKL
        D +TD   DP          +  K+    +LVPV SP KE  E V  D LL  +   ++ A E   PSPP +TS Q  +A E  D DEY++F+   FGK 
Subjt:  DPLTDFPTDPAASPKIAIFSETTKDQSAAALVPVRSPIKESKEYV--DDLLPYEQAKAEAAGEISNPSPPAQTSNQ-PSAVEEGDNDEYYQFLGEAFGKL

Query:  VMDAFDDVFASQADLQERLMKHQK
        + D F+D+F  QA+ QE  ++ QK
Subjt:  VMDAFDDVFASQADLQERLMKHQK

A0A5A7TWF8 Uncharacterized protein1.6e-0550.85Show/hide
Query:  NDEYYQFLGEAFGKLVMDAFDDVFASQADLQERLMKHQKQLQDLDLKIDNNANNHQSQI
        +DEY++F+   FGK + D F+D+F  QA+LQE  M+ QKQLQ+L+L+IDN    HQ+Q+
Subjt:  NDEYYQFLGEAFGKLVMDAFDDVFASQADLQERLMKHQKQLQDLDLKIDNNANNHQSQI

A0A5A7U0L9 Uncharacterized protein1.3e-1053.09Show/hide
Query:  GEISNPSPPAQTSN-QPSAVEEGDN-DEYYQFLGEAFGKLVMDAFDDVFASQADLQERLMKHQKQLQDLDLKIDNNANNHQ
        GE   P P  Q +N Q +A  E DN D Y++F+G+ FGK VMD F DVF +Q DLQE   +H+KQ+QDL+LKIDN   +HQ
Subjt:  GEISNPSPPAQTSN-QPSAVEEGDN-DEYYQFLGEAFGKLVMDAFDDVFASQADLQERLMKHQKQLQDLDLKIDNNANNHQ

A0A5D3D8Q5 Uncharacterized protein4.9e-0737.1Show/hide
Query:  DPLTDFPTDPAASPKIAIFSETTKDQSAAALVPVRSPIKESKEYV--DDLLPYEQAKAEAAGEISNPSPPAQTSNQPSAVEEGD-NDEYYQFLGEAFGKL
        D +TD   DP          +  K+    +LVPV SP KE  E V  D LL  +   ++ A E   PSPP +TS Q    +E D  DEY++F+   FGK 
Subjt:  DPLTDFPTDPAASPKIAIFSETTKDQSAAALVPVRSPIKESKEYV--DDLLPYEQAKAEAAGEISNPSPPAQTSNQPSAVEEGD-NDEYYQFLGEAFGKL

Query:  VMDAFDDVFASQADLQERLMKHQK
        + D F+D+F  QA+ QE  ++ +K
Subjt:  VMDAFDDVFASQADLQERLMKHQK

A0A5D3DS12 Uncharacterized protein1.6e-0550.85Show/hide
Query:  NDEYYQFLGEAFGKLVMDAFDDVFASQADLQERLMKHQKQLQDLDLKIDNNANNHQSQI
        +DEY++F+   FGK + D F+D+F  QA+LQE  M+ QKQLQ+L+L+IDN    HQ+Q+
Subjt:  NDEYYQFLGEAFGKLVMDAFDDVFASQADLQERLMKHQKQLQDLDLKIDNNANNHQSQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGACCCAAAACTATTCAAAACACAGTCTCCTTATTCACCTCGCATTATCCAAAACACATACTCTACACAGTTTCCTCAACCTTCTTGTTCTCTTCACCACATAAC
ACTTCCCAAAATATCCAAATCTCCACTTCTCAAAATATCCAAATCTCCCGTAAAGGCCAAATTGCCAAGCCCTCCTATCATAATCCAAACCTCCCCTTCTCCGCGACAAG
AGGACAATTCTCAAACTCTTGACGTCCCATTACCCTCACCTTCTCCCATTTTCCCGCCTGATCTTAATGACCCCACACCTGAACAAAGAGAGCTTGGGGAAGACTTCTTT
CAAGACCCTTTGACTGACTTTCCCACTGATCCTGCCGCAAGCCCAAAAATAGCCATATTCTCAGAAACGACTAAGGATCAGAGCGCTGCGGCCTTAGTTCCTGTTAGGTC
GCCAATTAAGGAGAGTAAGGAATATGTTGATGACCTACTCCCTTACGAACAAGCCAAAGCGGAGGCAGCTGGCGAGATAAGTAATCCTTCGCCGCCTGCTCAAACCAGCA
ACCAACCTTCAGCGGTGGAAGAAGGTGACAATGACGAGTATTACCAGTTTCTGGGGGAAGCTTTTGGTAAACTTGTGATGGACGCGTTTGATGATGTCTTCGCATCTCAG
GCTGACCTTCAAGAGCGACTGATGAAGCATCAAAAGCAACTTCAAGACTTGGACTTAAAAATTGATAATAACGCGAACAATCATCAGTCGCAAATCATTCGACTCGCATA
A
mRNA sequenceShow/hide mRNA sequence
ATGCAAGACCCAAAACTATTCAAAACACAGTCTCCTTATTCACCTCGCATTATCCAAAACACATACTCTACACAGTTTCCTCAACCTTCTTGTTCTCTTCACCACATAAC
ACTTCCCAAAATATCCAAATCTCCACTTCTCAAAATATCCAAATCTCCCGTAAAGGCCAAATTGCCAAGCCCTCCTATCATAATCCAAACCTCCCCTTCTCCGCGACAAG
AGGACAATTCTCAAACTCTTGACGTCCCATTACCCTCACCTTCTCCCATTTTCCCGCCTGATCTTAATGACCCCACACCTGAACAAAGAGAGCTTGGGGAAGACTTCTTT
CAAGACCCTTTGACTGACTTTCCCACTGATCCTGCCGCAAGCCCAAAAATAGCCATATTCTCAGAAACGACTAAGGATCAGAGCGCTGCGGCCTTAGTTCCTGTTAGGTC
GCCAATTAAGGAGAGTAAGGAATATGTTGATGACCTACTCCCTTACGAACAAGCCAAAGCGGAGGCAGCTGGCGAGATAAGTAATCCTTCGCCGCCTGCTCAAACCAGCA
ACCAACCTTCAGCGGTGGAAGAAGGTGACAATGACGAGTATTACCAGTTTCTGGGGGAAGCTTTTGGTAAACTTGTGATGGACGCGTTTGATGATGTCTTCGCATCTCAG
GCTGACCTTCAAGAGCGACTGATGAAGCATCAAAAGCAACTTCAAGACTTGGACTTAAAAATTGATAATAACGCGAACAATCATCAGTCGCAAATCATTCGACTCGCATA
A
Protein sequenceShow/hide protein sequence
MQDPKLFKTQSPYSPRIIQNTYSTQFPQPSCSLHHITLPKISKSPLLKISKSPVKAKLPSPPIIIQTSPSPRQEDNSQTLDVPLPSPSPIFPPDLNDPTPEQRELGEDFF
QDPLTDFPTDPAASPKIAIFSETTKDQSAAALVPVRSPIKESKEYVDDLLPYEQAKAEAAGEISNPSPPAQTSNQPSAVEEGDNDEYYQFLGEAFGKLVMDAFDDVFASQ
ADLQERLMKHQKQLQDLDLKIDNNANNHQSQIIRLA