CuGenDBv2

Gene ID	PI0028916
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Genome location	tig00003626:883055..883555
RNA-Seq Expression	PI0028916
Synteny	PI0028916
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0009507 - chloroplast (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0034357 - photosynthetic membrane (cellular component) GO:0016491 - oxidoreductase activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051536 - iron-sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR006243 - Photosystem I PsaA IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AHM91214.1 photosystem I P700 apoprotein A1, partial [Lagenaria siceraria]

8.6e-58

73.05

Show/hide

Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL                                
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------

Query:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL
              L RPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG DLVAVGG +  L
Subjt:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL

QHB75963.1 photosystem I P700 apoprotein A1 [Cucumis melo subsp. melo]

3.0e-58

73.65

Show/hide

Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL                                
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------

Query:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL
              L RPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGG +  L
Subjt:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL

YP_009447450.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita maxima]

8.6e-58

73.05

Show/hide

Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL                                
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------

Query:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL
              L RPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG DLVAVGG +  L
Subjt:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL

YP_009447535.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita moschata]

8.6e-58

73.05

Show/hide

Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL                                
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------

Query:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL
              L RPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG DLVAVGG +  L
Subjt:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL

YP_009751738.1 photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum]

8.6e-58

73.05

Show/hide

Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL                                
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------

Query:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL
              L RPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG DLVAVGG +  L
Subjt:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL

TrEMBL top hits

e value

%identity

Alignment

A0A0S2IFS3 Photosystem I P700 chlorophyll a apoprotein A1

4.2e-58

73.05

Show/hide

Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL                                
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------

Query:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL
              L RPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG DLVAVGG +  L
Subjt:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL

A0A1P8LDX9 Photosystem I P700 chlorophyll a apoprotein A1

4.2e-58

73.05

Show/hide

Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL                                
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------

Query:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL
              L RPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG DLVAVGG +  L
Subjt:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL

A0A2Z2CGB0 Photosystem I P700 chlorophyll a apoprotein A1

4.2e-58

73.05

Show/hide

Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL                                
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------

Query:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL
              L RPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG DLVAVGG +  L
Subjt:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL

A0A6B9M023 Photosystem I P700 chlorophyll a apoprotein A1

1.4e-58

73.65

Show/hide

Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL                                
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------

Query:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL
              L RPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGG +  L
Subjt:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL

X2F5B1 Photosystem I P700 chlorophyll a apoprotein A1

4.2e-58

73.05

Show/hide

Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL                                
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------

Query:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL
              L RPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG DLVAVGG +  L
Subjt:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL

SwissProt top hits

e value

%identity

Alignment

P06511 Photosystem I P700 chlorophyll a apoprotein A1

3.6e-59

71.26

Show/hide

Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------
        MLGSLTI++AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL                                
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------

Query:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL
              L RPQDMFSDTAIQLQPVFAQWIQNTHALAPS TAPGAT  TSLTWGGSDLVAVGG +  L
Subjt:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL

P58310 Photosystem I P700 chlorophyll a apoprotein A1

4.7e-59

70.66

Show/hide

Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------
        MLGSLTII+AHHMY+MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL                                
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------

Query:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL
              L RPQDMFSDTAIQLQP+FAQWIQNTHALAP ITAPGATTGTSLTWGG DLVAVG  +  L
Subjt:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL

Q0G9W2 Photosystem I P700 chlorophyll a apoprotein A1

4.7e-59

71.26

Show/hide

Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------
        MLGSLTII+AHHMY+MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL                                
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------

Query:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL
              L RPQDMFSDTAIQLQPVFAQWIQNTHALAPS TAPGATT TSLTWGG DLVAVGG +  L
Subjt:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL

Q2QD89 Photosystem I P700 chlorophyll a apoprotein A1

4.3e-60

72.46

Show/hide

Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL                                
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------

Query:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL
              L RPQDMFSDTAIQLQPVFAQWIQNTHALAP ITAPGATTGTSLTWGG DLVAVGG +  L
Subjt:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL

Q6EW48 Photosystem I P700 chlorophyll a apoprotein A1

6.2e-59

70.06

Show/hide

Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------
        MLGSLTI++AHHMY+MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL                                
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------

Query:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL
              L RPQDMFSDTAIQLQP+FAQWIQNTHALAPS TAPGAT GTSLTWGG DLVAVGG +  L
Subjt:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

2.3e-16

30.92

Show/hide

Query:  LGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLC--YLRRPQDMFS--------------------
        LG +T ++A HMY++P Y ++A D+ TQ +L+THH +I GF++ GA AH AIF +RDY+P    +++    L   + + S                    
Subjt:  LGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLC--YLRRPQDMFS--------------------

Query:  ---------DTAIQLQPVFAQWIQNTH--------ALAPSITAPGATTGTSL
                 +  I ++P+FAQWIQ+ H         L  S + P    G S+
Subjt:  ---------DTAIQLQPVFAQWIQNTH--------ALAPSITAPGATTGTSL

ATCG00350.1 Photosystem I, PsaA/PsaB protein

2.7e-57

67.66

Show/hide

Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------
        MLGSLTII+AHHMY+MPPYPYLATDY TQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPT RYNDL                                
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL--------------------------------

Query:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL
              L RPQDMFSDTAIQLQPVFAQWIQNTHALAP +TAPG T  TSLTWGG +LVAVGG +  L
Subjt:  ----CYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGSDLVAVGGLLCYL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTAGGCTCTTTAACCATTATTCTAGCTCACCATATGTATGCGATGCCCCCTTATCCATATCTAGCTACTGACTATGGTACACAACTTTCATTGTTCACACATCACAT
GTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCGCATGCAGCCATTTTTATGGTAAGAGACTATGATCCAACTACTCGCTACAACGATCTATGTTATCTGCGGCGTC
CCCAAGATATGTTTTCAGATACCGCTATACAATTACAACCCGTCTTTGCTCAATGGATACAAAATACCCATGCTTTAGCACCTAGTATAACGGCCCCCGGTGCAACAACA
GGCACCAGTTTGACTTGGGGGGGTAGTGATTTAGTGGCAGTGGGCGGCTTGCTTTGTTACCTATTCCGTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLRRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATT
GTSLTWGGSDLVAVGGLLCYLFR

PI0028916 (gene) of Melon (PI 482460) v1 genome