CuGenDBv2

Gene ID	PI0028927
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	protein LOW PSII ACCUMULATION 3, chloroplastic
Genome location	chr01:26834758..26839530
RNA-Seq Expression	PI0028927
Synteny	PI0028927
Gene Ontology terms	NA
InterPro domains	IPR018962 - Domain of unknown function DUF1995 IPR044687 - Protein LOW PSII ACCUMULATION 3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0058708.1 protein LOW PSII ACCUMULATION 3 [Cucumis melo var. makuwa]

2.6e-216

98.2

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
        M IMAFLSSPP+IPSLSRPFHSNFLFSPISSSLRRST SSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
Subjt:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL

Query:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN
        EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRAS+LFKTA+DSIDGITVSSLDDVPAG VTSFFRSVRN
Subjt:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN

Query:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAP
        TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTVAVAP
Subjt:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAP

Query:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

XP_004135877.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis sativus]

1.9e-214

97.68

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
        MAIMAFLSSPPHIPSLS PFH+NFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHC DKERAAPVTQ SDPKAGVPIYKPKTYEVLVSDAANSLAYAL
Subjt:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL

Query:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN
        EDGKMRLEIDFPPLPSNISSYKGSSD+FIDANIQLALAVARNLQEKRG RSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN
Subjt:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN

Query:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAP
        TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIP LLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTVAVAP
Subjt:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAP

Query:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        YIVNYSGALFRQY GPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

XP_008461181.1 PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis melo]

3.8e-215

97.68

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
        M IMAF+SSPP+IPSLSRPF SNFLFSPISSSLRRST SSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
Subjt:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL

Query:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN
        EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRAS+LFKTA+DSIDGITVSSLDDVPAG VTSFFRSVRN
Subjt:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN

Query:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAP
        TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTVAVAP
Subjt:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAP

Query:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

XP_022992481.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita maxima]

1.4e-209

94.12

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSL RPFHSNFLFSPISSS   LRRSTRSSLFGAQTLA SGFCFRIHC DKERAAPVT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRS
        YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKP+K RASQLFKTALDSIDGIT+SSLDD+PAG VTSFFRS
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRS

Query:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVA
        +RNTLDFDFED+NAGRWTSS+PPSLYIFINCSTREL +IEKYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTV 
Subjt:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVA

Query:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSEVSSAWRS
Subjt:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

XP_038900014.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Benincasa hispida]

1.4e-212

96.42

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Query:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAF+SSPP IPSLSR FHSNFLFSPISSS   LRRSTRSSLFGAQTLA SGFCFRIHCRDKER +PVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRS
        YALEDGK+RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAG VTSFFRS
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRS

Query:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVA
        VRNTLDFDFED+N+GRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTVA
Subjt:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVA

Query:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KA03 DUF1995 domain-containing protein

9.2e-215

97.68

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
        MAIMAFLSSPPHIPSLS PFH+NFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHC DKERAAPVTQ SDPKAGVPIYKPKTYEVLVSDAANSLAYAL
Subjt:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL

Query:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN
        EDGKMRLEIDFPPLPSNISSYKGSSD+FIDANIQLALAVARNLQEKRG RSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN
Subjt:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN

Query:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAP
        TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIP LLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTVAVAP
Subjt:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAP

Query:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        YIVNYSGALFRQY GPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

A0A1S3CFB8 protein LOW PSII ACCUMULATION 3, chloroplastic

1.8e-215

97.68

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
        M IMAF+SSPP+IPSLSRPF SNFLFSPISSSLRRST SSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
Subjt:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL

Query:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN
        EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRAS+LFKTA+DSIDGITVSSLDDVPAG VTSFFRSVRN
Subjt:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN

Query:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAP
        TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTVAVAP
Subjt:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAP

Query:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

A0A5A7UU42 Protein LOW PSII ACCUMULATION 3

1.3e-216

98.2

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
        M IMAFLSSPP+IPSLSRPFHSNFLFSPISSSLRRST SSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
Subjt:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL

Query:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN
        EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRAS+LFKTA+DSIDGITVSSLDDVPAG VTSFFRSVRN
Subjt:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRN

Query:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAP
        TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTVAVAP
Subjt:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAP

Query:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

A0A6J1GQW6 protein LOW PSII ACCUMULATION 3, chloroplastic

1.2e-209

94.12

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSL RPFHSNFLFSPI+SS   LRRSTRSSLFGAQTLA SGFCFRIHC DKERAAPVT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRS
        YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKP+K RASQLFKTALDSIDGIT+SSLDDVPAG VTSFFRS
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRS

Query:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVA
        +RNTLDFDFED+NAGRWTSS+PPSLYIFINCSTREL +IEKYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTV 
Subjt:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVA

Query:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSEVSSAWRS
Subjt:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

A0A6J1JTN7 protein LOW PSII ACCUMULATION 3, chloroplastic

6.8e-210

94.12

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSL RPFHSNFLFSPISSS   LRRSTRSSLFGAQTLA SGFCFRIHC DKERAAPVT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRS
        YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKP+K RASQLFKTALDSIDGIT+SSLDD+PAG VTSFFRS
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRS

Query:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVA
        +RNTLDFDFED+NAGRWTSS+PPSLYIFINCSTREL +IEKYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTV 
Subjt:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVA

Query:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSEVSSAWRS
Subjt:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

SwissProt top hits

e value

%identity

Alignment

Q8H0W0 Protein LPA3

1.2e-150

78.5

Show/hide

Query:  TQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQL
        + +SDP+ GVP+YKPK+YEVL +DAANSLA+AL+D K RLEIDFPPLPS+ISSYKGSSD+FIDANIQLA+ V R LQEK  TR+CIVFPDKPEKRRASQ 
Subjt:  TQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQL

Query:  FKTALDSIDGITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLG
        FK A DS+DGI++ SLDD+P  +VT+FFRS+R+TLDFDFED+N G W   +PP+LYIFINCSTREL  IEK+VETFASS P LLFNLEL+TLRADLGLLG
Subjt:  FKTALDSIDGITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLG

Query:  FPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG
        FPPKDLHYRFLSQFIPVFY+R REYSKTVAVAP+++NY+GALFRQYPGPWQVMLKQ+D S+ACVAES TRFTLGETK+ELL+VLGLQEE+GSSLEFLRRG
Subjt:  FPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG

Query:  YKAATWWEEDVDSEVSSAWRS
        YK+ATWWEEDV+ E SS WR+
Subjt:  YKAATWWEEDVDSEVSSAWRS

Arabidopsis top hits

e value

%identity

Alignment

AT1G73060.1 Low PSII Accumulation 3

8.4e-152

78.5

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Query:  TQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQL
        + +SDP+ GVP+YKPK+YEVL +DAANSLA+AL+D K RLEIDFPPLPS+ISSYKGSSD+FIDANIQLA+ V R LQEK  TR+CIVFPDKPEKRRASQ 
Subjt:  TQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQL

Query:  FKTALDSIDGITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLG
        FK A DS+DGI++ SLDD+P  +VT+FFRS+R+TLDFDFED+N G W   +PP+LYIFINCSTREL  IEK+VETFASS P LLFNLEL+TLRADLGLLG
Subjt:  FKTALDSIDGITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLG

Query:  FPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG
        FPPKDLHYRFLSQFIPVFY+R REYSKTVAVAP+++NY+GALFRQYPGPWQVMLKQ+D S+ACVAES TRFTLGETK+ELL+VLGLQEE+GSSLEFLRRG
Subjt:  FPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG

Query:  YKAATWWEEDVDSEVSSAWRS
        YK+ATWWEEDV+ E SS WR+
Subjt:  YKAATWWEEDVDSEVSSAWRS

AT5G48790.1 Domain of unknown function (DUF1995)

1.3e-11

26.69

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Query:  PKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSD---EFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQ-LFKTALDSIDG
        P+ Y  L++ A  ++  AL+D K  +EI+FP   S ++S  G  +   E  ++   +     R L  ++   + I FP+  E + A + +F      +D 
Subjt:  PKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSD---EFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQ-LFKTALDSIDG

Query:  ITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEK-YVETFASSIPTL-LFNLELETLRADLGLLGFPPKDLHY
        +T  SL +        FF  V+           A R    D   L  +   +  E+ ++E+ Y E   ++   L +FN EL+ +R+     G+ PK    
Subjt:  ITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEK-YVETFASSIPTL-LFNLELETLRADLGLLGFPPKDLHY

Query:  RFLSQFIPVFYVRIREYSKT----VAVAPYIVNY----SGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELL
                 FY ++   +KT    +    YI N+     G LFR YPGPWQV L+++ N Y CV + E+  +L E   ++L
Subjt:  RFLSQFIPVFYVRIREYSKT----VAVAPYIVNY----SGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELL

Sequences

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CDS sequence

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ATGGCGATCATGGCGTTTCTCTCTTCACCACCCCACATTCCCTCTCTTTCTCGACCGTTTCATAGCAACTTTCTCTTCTCTCCCATTTCCTCTTCCTTACGCCGTTCTAC
TCGATCCAGTTTATTTGGCGCTCAAACTTTGGCGGCTTCGGGATTTTGCTTTAGAATACACTGTCGTGACAAAGAACGAGCTGCACCGGTTACTCAGAGCTCCGATCCTA
AGGCTGGAGTTCCGATTTATAAGCCCAAAACCTACGAGGTGTTAGTCTCCGATGCTGCGAATTCTCTTGCTTATGCTCTGGAAGATGGAAAGATGCGGTTGGAGATTGAT
TTCCCACCCCTGCCTAGCAACATTTCTTCATATAAGGGATCTTCAGATGAGTTCATTGATGCAAATATTCAACTGGCCCTAGCTGTTGCAAGGAATCTTCAAGAAAAGAG
AGGAACTAGATCTTGCATTGTGTTTCCAGATAAGCCAGAGAAGCGCAGAGCTTCACAGTTGTTCAAAACAGCTCTTGACTCGATCGATGGTATAACTGTAAGTTCCCTGG
ACGATGTTCCTGCTGGAGCTGTCACATCTTTCTTCAGATCTGTTAGAAACACCCTTGATTTTGATTTTGAAGACGACAATGCAGGTCGTTGGACATCTAGTGACCCTCCA
TCTTTGTATATATTCATTAATTGTAGCACGCGTGAACTTGGTTTGATAGAGAAGTATGTGGAAACTTTTGCTTCGTCAATCCCTACCCTGTTGTTTAATCTAGAACTTGA
AACCTTGCGTGCGGACTTGGGCTTACTGGGATTTCCCCCCAAAGATTTGCATTATCGATTTCTCTCTCAGTTTATCCCAGTGTTCTACGTTCGAATCAGAGAGTATTCTA
AGACAGTAGCAGTAGCACCTTATATTGTTAATTACAGTGGAGCATTGTTTCGTCAATACCCTGGACCTTGGCAAGTGATGCTGAAACAATCTGATAATTCTTATGCCTGC
GTTGCAGAGAGTGAAACAAGGTTCACCCTTGGTGAAACCAAAGATGAACTACTGAGGGTCCTTGGACTACAGGAGGAGCAAGGAAGCTCACTAGAATTTCTCCGCAGGGG
CTACAAGGCTGCCACTTGGTGGGAAGAAGATGTTGATTCTGAAGTATCTTCCGCATGGCGTAGTTGA

mRNA sequence

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Protein sequence

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MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEID
FPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPP
SLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYAC
VAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

PI0028927 (gene) of Melon (PI 482460) v1 genome