; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0028940 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028940
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr04:19562708..19564052
RNA-Seq ExpressionPI0028940
SyntenyPI0028940
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]1.0e-12655.74Show/hide
Query:  MEEFDLAIRHADLVEPAVQGNWFTWTSK----------------------------------------------------------------DTSFSDVV
        MEEFDLAIR ADLVEP+VQGNWFTWTSK                                                                + SF +VV
Subjt:  MEEFDLAIRHADLVEPAVQGNWFTWTSK----------------------------------------------------------------DTSFSDVV

Query:  SSVWVRRLGVSPLVSLMQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAMDRAQREVERDPGSVERSRDASVATDAFWSAIRQEEASLRKKSWVRWLELGD
        + +W R  GVS LVSLM+NLH+LKP+LRR FGRHI  LSEEV +AKEAMD AQREVER+P S   SR AS+AT+ FW+A+R EEASLR+KS VRWL LGD
Subjt:  SSVWVRRLGVSPLVSLMQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAMDRAQREVERDPGSVERSRDASVATDAFWSAIRQEEASLRKKSWVRWLELGD

Query:  QNSTFFHRLICSRIGRNNLLSTVDFEGIWVTSHERLMQ------------------------EEVVQFRWTEECCHALQAPIRREEIRRVVFAMDSSKAP
        QN+ FFHR + SR+ RN+LLS VD +G  V+SH+ + Q                        +++VQF+W+EECC ALQ PI REE+RRV+F+MDS KAP
Subjt:  QNSTFFHRLICSRIGRNNLLSTVDFEGIWVTSHERLMQ------------------------EEVVQFRWTEECCHALQAPIRREEIRRVVFAMDSSKAP

Query:  GLDGFSAGFFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKCISKILADRLRVWLHSFISGNQSTYVVGRSI
        G DGFS GF+K AW+ V EDFC+ V+HFFETCYLP GVNATAITLIPK  GA+R+ED+RPISCCNV+YKCISKILADRLR+WL SFIS NQS ++ GRSI
Subjt:  GLDGFSAGFFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKCISKILADRLRVWLHSFISGNQSTYVVGRSI

Query:  VDNILLCQEMVGDYHGSSGPPRCAMKL
        ++NILLCQE+VG YH +SG PRC +K+
Subjt:  VDNILLCQEMVGDYHGSSGPPRCAMKL

KAA0048521.1 uncharacterized protein E6C27_scaffold61G001420 [Cucumis melo var. makuwa]3.4e-11462.65Show/hide
Query:  MEEFDLAIRHADLVEPAVQGNWFTWTSK---------------DTSFSDVVSSVWVRRLGVSPLVSLMQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAM
        ME+FDLAIR ADLVEP+VQGNWFTWTSK               D SF +VVS +W R  GVSPLVSL++NL +LK  +RRHFGRHI  LSEEV  AKEAM
Subjt:  MEEFDLAIRHADLVEPAVQGNWFTWTSK---------------DTSFSDVVSSVWVRRLGVSPLVSLMQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAM

Query:  DRAQREVERDPGSVERSRDASVATDAFWSAIRQEEASLRKKSWVRWLELGDQNSTFFHRLICSR---IGRNNLLSTVDFEGIWVTSHERLMQEEVVQFRW
        DRAQREV+R+P S   SR A +AT+AFW+ +R EEASL +K  +RWLELG+QN+ FFHR + SR   I    L   +D               ++VQFRW
Subjt:  DRAQREVERDPGSVERSRDASVATDAFWSAIRQEEASLRKKSWVRWLELGDQNSTFFHRLICSR---IGRNNLLSTVDFEGIWVTSHERLMQEEVVQFRW

Query:  TEECCHALQAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKC
        +EECC ALQ PI REE+RRV+F+MDS KA G DGFS  FFK  W+ V EDFCDV++HFFETCYLP GVNAT ITLIPKR GA+ +E++RPIS CNV+YKC
Subjt:  TEECCHALQAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKC

Query:  ISKILADRLRVWLHSFISGNQSTYVVGRSIVDNILLCQEM
        ISKILADRL VWL SFISGNQS ++ GRSI+DNILLCQE+
Subjt:  ISKILADRLRVWLHSFISGNQSTYVVGRSIVDNILLCQEM

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]7.5e-13059.7Show/hide
Query:  MEEFDLAIRHADLVEPAVQGNWFTWTSK----------------------------------DTSFSDVVSSVWVRRLGVSPLVSLMQNLHYLKPVLRRH
        ME+FDLA R ADLVEP+VQGNWFTWTSK                                  D SF +VV+ +W R  GVSPLVSLM+NL  LKP LRR 
Subjt:  MEEFDLAIRHADLVEPAVQGNWFTWTSK----------------------------------DTSFSDVVSSVWVRRLGVSPLVSLMQNLHYLKPVLRRH

Query:  FGRHISGLSEEVCLAKEAMDRAQREVERDPGSVERSRDASVATDAFWSAIRQEEASLRKKSWVRWLELGDQNSTFFHRLICSRIGRNNLLSTVDFEGIWV
        FGRHI  L+EEV +AKE MDRAQREVE +P S   SR   +AT+AFW+A+R EEASLR+KS +RWLELGDQN+ FFHR + SR+ RN+LLS VD +G  V
Subjt:  FGRHISGLSEEVCLAKEAMDRAQREVERDPGSVERSRDASVATDAFWSAIRQEEASLRKKSWVRWLELGDQNSTFFHRLICSRIGRNNLLSTVDFEGIWV

Query:  TSHERLMQ------------------------EEVVQFRWTEECCHALQAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFE
        +SH+ ++Q                        +++VQFRW+EECC ALQ PI REE+RRV+F+MDS KAPG DGFS GFFK AW+ V EDFCDVV+HFFE
Subjt:  TSHERLMQ------------------------EEVVQFRWTEECCHALQAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFE

Query:  TCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKCISKILADRLRVWLHSFISGNQSTYVVGRSIVDNILLCQEMVGDYHGSSGPPRCAMKL
        TCYLP GVNAT ITLIPKR GA++ME++RPISCCNV+YKCISKILADRLRVWL SFI  NQS ++ GRSI+DNILLCQE+V  YH +SG PRC +K+
Subjt:  TCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKCISKILADRLRVWLHSFISGNQSTYVVGRSIVDNILLCQEMVGDYHGSSGPPRCAMKL

TYK28312.1 uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa]2.6e-11462.65Show/hide
Query:  MEEFDLAIRHADLVEPAVQGNWFTWTSK---------------DTSFSDVVSSVWVRRLGVSPLVSLMQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAM
        ME+FDLAIR ADLVEP+VQGNWFTWTSK               D SF +VVS +W R  GVSPLVSL++NL +LK  +RRHFGRHI  LSEEV  AKEAM
Subjt:  MEEFDLAIRHADLVEPAVQGNWFTWTSK---------------DTSFSDVVSSVWVRRLGVSPLVSLMQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAM

Query:  DRAQREVERDPGSVERSRDASVATDAFWSAIRQEEASLRKKSWVRWLELGDQNSTFFHRLICSR---IGRNNLLSTVDFEGIWVTSHERLMQEEVVQFRW
        DRAQREV+R+P S   SR A +AT+AFW+ +R EEASL +K  +RWLELG+QN+ FFHR + SR   I    L   +D               ++VQFRW
Subjt:  DRAQREVERDPGSVERSRDASVATDAFWSAIRQEEASLRKKSWVRWLELGDQNSTFFHRLICSR---IGRNNLLSTVDFEGIWVTSHERLMQEEVVQFRW

Query:  TEECCHALQAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKC
        +EECC ALQ PI REE+RRV+F+MDS KA G DGFS  FFK  W+ V EDFCDV++HFFETCYLP GVNAT ITLIPKR GA+ +E++RPIS CNV+YKC
Subjt:  TEECCHALQAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKC

Query:  ISKILADRLRVWLHSFISGNQSTYVVGRSIVDNILLCQEM
        ISKILADRL VWL SFISGNQS ++ GRSI+DNILLCQE+
Subjt:  ISKILADRLRVWLHSFISGNQSTYVVGRSIVDNILLCQEM

XP_031740402.1 uncharacterized protein LOC116403409 [Cucumis sativus]5.0e-11056.73Show/hide
Query:  EPAVQGNWFTWTSKDTSFSDVVSSVWVRRLGVSPLVSLMQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAMDRAQREVERDPGSVERSRDASVATDAFWS
        +  V   +F    ++ SF DVVSS W +   VSP+V++++NL  LK +LRRHFGRHI  +SE+V LA + MDRA+RE+E +  S E S  AS+AT  FW 
Subjt:  EPAVQGNWFTWTSKDTSFSDVVSSVWVRRLGVSPLVSLMQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAMDRAQREVERDPGSVERSRDASVATDAFWS

Query:  AIRQEEASLRKKSWVRWLELGDQNSTFFHRLICSRIGRNNLLSTVDFEGIWVTSHERLMQ------------------------EEVVQFRWTEECCHAL
        A+R EEA++R+KS  RWL+L DQN+ FFHR + SR   N L S +D +G  +T+H+++ Q                        EE+VQFRWTEECC AL
Subjt:  AIRQEEASLRKKSWVRWLELGDQNSTFFHRLICSRIGRNNLLSTVDFEGIWVTSHERLMQ------------------------EEVVQFRWTEECCHAL

Query:  QAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKCISKILADR
        Q+PI REE+RRV+F+MD  KAPG DG+S GFFK AW  V E FCDVV+HFFET Y P GVN TAITLIPKRNGADR+ED+ PISCC+V+YKCIS+ILADR
Subjt:  QAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKCISKILADR

Query:  LRVWLHSFISGNQSTYVVGRSIVDNILLCQEMVGDYHGSSGPPRCAMKL
        LRVWL SF+SGNQ  ++ GRSI+DNILLCQE+VG YH   G PRC MK+
Subjt:  LRVWLHSFISGNQSTYVVGRSIVDNILLCQEMVGDYHGSSGPPRCAMKL

TrEMBL top hitse value%identityAlignment
A0A5A7TZS0 Reverse transcriptase domain-containing protein4.9e-12755.74Show/hide
Query:  MEEFDLAIRHADLVEPAVQGNWFTWTSK----------------------------------------------------------------DTSFSDVV
        MEEFDLAIR ADLVEP+VQGNWFTWTSK                                                                + SF +VV
Subjt:  MEEFDLAIRHADLVEPAVQGNWFTWTSK----------------------------------------------------------------DTSFSDVV

Query:  SSVWVRRLGVSPLVSLMQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAMDRAQREVERDPGSVERSRDASVATDAFWSAIRQEEASLRKKSWVRWLELGD
        + +W R  GVS LVSLM+NLH+LKP+LRR FGRHI  LSEEV +AKEAMD AQREVER+P S   SR AS+AT+ FW+A+R EEASLR+KS VRWL LGD
Subjt:  SSVWVRRLGVSPLVSLMQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAMDRAQREVERDPGSVERSRDASVATDAFWSAIRQEEASLRKKSWVRWLELGD

Query:  QNSTFFHRLICSRIGRNNLLSTVDFEGIWVTSHERLMQ------------------------EEVVQFRWTEECCHALQAPIRREEIRRVVFAMDSSKAP
        QN+ FFHR + SR+ RN+LLS VD +G  V+SH+ + Q                        +++VQF+W+EECC ALQ PI REE+RRV+F+MDS KAP
Subjt:  QNSTFFHRLICSRIGRNNLLSTVDFEGIWVTSHERLMQ------------------------EEVVQFRWTEECCHALQAPIRREEIRRVVFAMDSSKAP

Query:  GLDGFSAGFFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKCISKILADRLRVWLHSFISGNQSTYVVGRSI
        G DGFS GF+K AW+ V EDFC+ V+HFFETCYLP GVNATAITLIPK  GA+R+ED+RPISCCNV+YKCISKILADRLR+WL SFIS NQS ++ GRSI
Subjt:  GLDGFSAGFFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKCISKILADRLRVWLHSFISGNQSTYVVGRSI

Query:  VDNILLCQEMVGDYHGSSGPPRCAMKL
        ++NILLCQE+VG YH +SG PRC +K+
Subjt:  VDNILLCQEMVGDYHGSSGPPRCAMKL

A0A5A7U4M4 Reverse transcriptase domain-containing protein1.6e-11462.65Show/hide
Query:  MEEFDLAIRHADLVEPAVQGNWFTWTSK---------------DTSFSDVVSSVWVRRLGVSPLVSLMQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAM
        ME+FDLAIR ADLVEP+VQGNWFTWTSK               D SF +VVS +W R  GVSPLVSL++NL +LK  +RRHFGRHI  LSEEV  AKEAM
Subjt:  MEEFDLAIRHADLVEPAVQGNWFTWTSK---------------DTSFSDVVSSVWVRRLGVSPLVSLMQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAM

Query:  DRAQREVERDPGSVERSRDASVATDAFWSAIRQEEASLRKKSWVRWLELGDQNSTFFHRLICSR---IGRNNLLSTVDFEGIWVTSHERLMQEEVVQFRW
        DRAQREV+R+P S   SR A +AT+AFW+ +R EEASL +K  +RWLELG+QN+ FFHR + SR   I    L   +D               ++VQFRW
Subjt:  DRAQREVERDPGSVERSRDASVATDAFWSAIRQEEASLRKKSWVRWLELGDQNSTFFHRLICSR---IGRNNLLSTVDFEGIWVTSHERLMQEEVVQFRW

Query:  TEECCHALQAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKC
        +EECC ALQ PI REE+RRV+F+MDS KA G DGFS  FFK  W+ V EDFCDV++HFFETCYLP GVNAT ITLIPKR GA+ +E++RPIS CNV+YKC
Subjt:  TEECCHALQAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKC

Query:  ISKILADRLRVWLHSFISGNQSTYVVGRSIVDNILLCQEM
        ISKILADRL VWL SFISGNQS ++ GRSI+DNILLCQE+
Subjt:  ISKILADRLRVWLHSFISGNQSTYVVGRSIVDNILLCQEM

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein3.6e-13059.7Show/hide
Query:  MEEFDLAIRHADLVEPAVQGNWFTWTSK----------------------------------DTSFSDVVSSVWVRRLGVSPLVSLMQNLHYLKPVLRRH
        ME+FDLA R ADLVEP+VQGNWFTWTSK                                  D SF +VV+ +W R  GVSPLVSLM+NL  LKP LRR 
Subjt:  MEEFDLAIRHADLVEPAVQGNWFTWTSK----------------------------------DTSFSDVVSSVWVRRLGVSPLVSLMQNLHYLKPVLRRH

Query:  FGRHISGLSEEVCLAKEAMDRAQREVERDPGSVERSRDASVATDAFWSAIRQEEASLRKKSWVRWLELGDQNSTFFHRLICSRIGRNNLLSTVDFEGIWV
        FGRHI  L+EEV +AKE MDRAQREVE +P S   SR   +AT+AFW+A+R EEASLR+KS +RWLELGDQN+ FFHR + SR+ RN+LLS VD +G  V
Subjt:  FGRHISGLSEEVCLAKEAMDRAQREVERDPGSVERSRDASVATDAFWSAIRQEEASLRKKSWVRWLELGDQNSTFFHRLICSRIGRNNLLSTVDFEGIWV

Query:  TSHERLMQ------------------------EEVVQFRWTEECCHALQAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFE
        +SH+ ++Q                        +++VQFRW+EECC ALQ PI REE+RRV+F+MDS KAPG DGFS GFFK AW+ V EDFCDVV+HFFE
Subjt:  TSHERLMQ------------------------EEVVQFRWTEECCHALQAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFE

Query:  TCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKCISKILADRLRVWLHSFISGNQSTYVVGRSIVDNILLCQEMVGDYHGSSGPPRCAMKL
        TCYLP GVNAT ITLIPKR GA++ME++RPISCCNV+YKCISKILADRLRVWL SFI  NQS ++ GRSI+DNILLCQE+V  YH +SG PRC +K+
Subjt:  TCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKCISKILADRLRVWLHSFISGNQSTYVVGRSIVDNILLCQEMVGDYHGSSGPPRCAMKL

A0A5D3DSA8 Putative non-LTR retroelement reverse transcriptase8.4e-10363.39Show/hide
Query:  MQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAMDRAQREVERDPGSVERSRDASVATDAFWSAIRQEEASLRKKSWVRWLELGDQNSTFFHRLICSRIGR
        M+NLH LKP LRR FGRHI  LSEEV +AKE MDRAQREVER+P S   SR A +AT++FW+A+R EEASLR+KS ++WL LGDQN+ FFHR + SR+ R
Subjt:  MQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAMDRAQREVERDPGSVERSRDASVATDAFWSAIRQEEASLRKKSWVRWLELGDQNSTFFHRLICSRIGR

Query:  NNLLSTVDFEGIWVTSHERLMQ-----------------------EEVVQFRWTEECCHALQAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTV
        N+LLS VD +G  V +H+ ++                        +++VQFRW E+CC ALQ PI R+E+RRV+F+MD+ KAPG DGFS GFFK  W  V
Subjt:  NNLLSTVDFEGIWVTSHERLMQ-----------------------EEVVQFRWTEECCHALQAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTV

Query:  SEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKCISKILADRLRVWLHSFISGNQSTYVVGRSIVDNILLCQEMVG
         EDFCD V+HFFETCYLP GVNATAITLIPKR+GA+RMED+RPISCCNV+YKCISKILADRLRVWL SFIS NQS ++ GRSI++NILLCQE+ G
Subjt:  SEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKCISKILADRLRVWLHSFISGNQSTYVVGRSIVDNILLCQEMVG

A0A5D3DXQ8 Reverse transcriptase domain-containing protein1.2e-11462.65Show/hide
Query:  MEEFDLAIRHADLVEPAVQGNWFTWTSK---------------DTSFSDVVSSVWVRRLGVSPLVSLMQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAM
        ME+FDLAIR ADLVEP+VQGNWFTWTSK               D SF +VVS +W R  GVSPLVSL++NL +LK  +RRHFGRHI  LSEEV  AKEAM
Subjt:  MEEFDLAIRHADLVEPAVQGNWFTWTSK---------------DTSFSDVVSSVWVRRLGVSPLVSLMQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAM

Query:  DRAQREVERDPGSVERSRDASVATDAFWSAIRQEEASLRKKSWVRWLELGDQNSTFFHRLICSR---IGRNNLLSTVDFEGIWVTSHERLMQEEVVQFRW
        DRAQREV+R+P S   SR A +AT+AFW+ +R EEASL +K  +RWLELG+QN+ FFHR + SR   I    L   +D               ++VQFRW
Subjt:  DRAQREVERDPGSVERSRDASVATDAFWSAIRQEEASLRKKSWVRWLELGDQNSTFFHRLICSR---IGRNNLLSTVDFEGIWVTSHERLMQEEVVQFRW

Query:  TEECCHALQAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKC
        +EECC ALQ PI REE+RRV+F+MDS KA G DGFS  FFK  W+ V EDFCDV++HFFETCYLP GVNAT ITLIPKR GA+ +E++RPIS CNV+YKC
Subjt:  TEECCHALQAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKC

Query:  ISKILADRLRVWLHSFISGNQSTYVVGRSIVDNILLCQEM
        ISKILADRL VWL SFISGNQS ++ GRSI+DNILLCQE+
Subjt:  ISKILADRLRVWLHSFISGNQSTYVVGRSIVDNILLCQEM

SwissProt top hitse value%identityAlignment
P11369 LINE-1 retrotransposable element ORF2 protein1.5e-1133.6Show/hide
Query:  LQAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFETC----YLPHGVNATAITLIPK-RNGADRMEDYRPISCCNVVYKCIS
        L +PI  +EI  V+ ++ + K+PG DGFSA F++    T  ED   ++   F        LP+      ITLIPK +    ++E++RPIS  N+  K ++
Subjt:  LQAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFETC----YLPHGVNATAITLIPK-RNGADRMEDYRPISCCNVVYKCIS

Query:  KILADRLRVWLHSFISGNQSTYVVG
        KILA+R++  + + I  +Q  ++ G
Subjt:  KILADRLRVWLHSFISGNQSTYVVG

P14381 Transposon TX1 uncharacterized 149 kDa protein8.8e-1732.09Show/hide
Query:  LQAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKCISKILAD
        L+ PI  +E+ + +  M  +K+PGLDG +  FF+  W+T+  DF  V+   F+   LP       ++L+PK+     ++++RP+S  +  YK ++K ++ 
Subjt:  LQAPIRREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKCISKILAD

Query:  RLRVWLHSFISGNQSTYVVGRSIVDNILLCQEMV
        RL+  L   I  +QS  V GR+I DN+ L ++++
Subjt:  RLRVWLHSFISGNQSTYVVGRSIVDNILLCQEMV

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein2.0e-2428.97Show/hide
Query:  WFTWTSKDTSFSDVVSSVWVRRLGV-SPLVSLMQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAMDRAQREVERDPG-SVERSRDASVATDAFWSAIRQE
        +F++ S   +F   ++  W  ++ V S + SL ++L   K   +    +    +  +   A ++++  Q ++  +P  S+ R    +     F++A    
Subjt:  WFTWTSKDTSFSDVVSSVWVRRLGV-SPLVSLMQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAMDRAQREVERDPG-SVERSRDASVATDAFWSAIRQE

Query:  EASLRKKSWVRWLELGDQNSTFFHRLICSRIGRN--------------NLLSTVDFEGIWVT----SHERLMQEEVVQ-------FRWTEECCHALQAPI
        E+  R+KS ++WL+ GD N+ FFH++I +   +N              N+    +    + T    S   ++  + VQ       FR  +     L A  
Subjt:  EASLRKKSWVRWLELGDQNSTFFHRLICSRIGRN--------------NLLSTVDFEGIWVT----SHERLMQEEVVQ-------FRWTEECCHALQAPI

Query:  RREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKCIS
          +EI   VFAM  +KAPG D F+A FF  +W  V +     V  FF T +L    NATAITLIPK  G D++  +RP+SCC VVYK I+
Subjt:  RREEIRRVVFAMDSSKAPGLDGFSAGFFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKCIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGTTTGATCTTGCTATTCGTCATGCTGACTTGGTTGAGCCAGCTGTTCAGGGAAACTGGTTCACTTGGACTAGCAAGGATACGTCTTTCAGTGATGTGGTGTC
TTCGGTTTGGGTGAGAAGGTTGGGTGTGTCTCCGTTAGTGAGTCTTATGCAGAATTTGCATTATCTGAAACCTGTGCTTCGTAGACATTTTGGTAGACATATCAGTGGCC
TTAGTGAGGAGGTGTGCTTGGCTAAAGAGGCTATGGATAGGGCCCAACGAGAGGTTGAGCGGGATCCTGGGTCTGTGGAGAGGAGTCGTGATGCTAGTGTTGCGACTGAT
GCCTTTTGGTCAGCTATCCGTCAGGAAGAAGCCTCTCTCCGTAAAAAATCATGGGTTAGGTGGTTAGAGCTTGGGGATCAAAATTCTACCTTTTTTCATCGCTTGATTTG
TTCCCGTATTGGTCGTAATAATTTGCTTTCTACTGTTGATTTTGAGGGTATTTGGGTGACGTCCCATGAGAGGTTGATGCAGGAGGAGGTGGTTCAGTTTAGGTGGACGG
AGGAGTGTTGTCATGCGTTACAGGCTCCGATTAGGCGTGAGGAGATCAGGAGGGTGGTTTTTGCTATGGATAGTAGTAAGGCTCCTGGTCTTGATGGTTTTTCGGCAGGC
TTCTTCAAAGCTGCTTGGAACACGGTTAGTGAGGATTTTTGTGATGTTGTGATGCATTTCTTTGAGACGTGTTATCTGCCTCATGGGGTTAATGCTACTGCGATCACCCT
CATTCCCAAACGTAATGGGGCTGATCGTATGGAGGATTATAGGCCTATTTCGTGTTGTAATGTGGTTTACAAGTGCATTTCTAAGATTTTGGCGGATAGGCTTCGTGTGT
GGCTTCATTCTTTTATCAGTGGTAATCAATCAACCTATGTTGTTGGGAGGAGTATTGTTGATAACATTCTGCTTTGTCAGGAGATGGTGGGGGATTATCATGGTTCTTCG
GGTCCGCCTAGGTGTGCGATGAAGCTTGTTGCTTGCTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGTTTGATCTTGCTATTCGTCATGCTGACTTGGTTGAGCCAGCTGTTCAGGGAAACTGGTTCACTTGGACTAGCAAGGATACGTCTTTCAGTGATGTGGTGTC
TTCGGTTTGGGTGAGAAGGTTGGGTGTGTCTCCGTTAGTGAGTCTTATGCAGAATTTGCATTATCTGAAACCTGTGCTTCGTAGACATTTTGGTAGACATATCAGTGGCC
TTAGTGAGGAGGTGTGCTTGGCTAAAGAGGCTATGGATAGGGCCCAACGAGAGGTTGAGCGGGATCCTGGGTCTGTGGAGAGGAGTCGTGATGCTAGTGTTGCGACTGAT
GCCTTTTGGTCAGCTATCCGTCAGGAAGAAGCCTCTCTCCGTAAAAAATCATGGGTTAGGTGGTTAGAGCTTGGGGATCAAAATTCTACCTTTTTTCATCGCTTGATTTG
TTCCCGTATTGGTCGTAATAATTTGCTTTCTACTGTTGATTTTGAGGGTATTTGGGTGACGTCCCATGAGAGGTTGATGCAGGAGGAGGTGGTTCAGTTTAGGTGGACGG
AGGAGTGTTGTCATGCGTTACAGGCTCCGATTAGGCGTGAGGAGATCAGGAGGGTGGTTTTTGCTATGGATAGTAGTAAGGCTCCTGGTCTTGATGGTTTTTCGGCAGGC
TTCTTCAAAGCTGCTTGGAACACGGTTAGTGAGGATTTTTGTGATGTTGTGATGCATTTCTTTGAGACGTGTTATCTGCCTCATGGGGTTAATGCTACTGCGATCACCCT
CATTCCCAAACGTAATGGGGCTGATCGTATGGAGGATTATAGGCCTATTTCGTGTTGTAATGTGGTTTACAAGTGCATTTCTAAGATTTTGGCGGATAGGCTTCGTGTGT
GGCTTCATTCTTTTATCAGTGGTAATCAATCAACCTATGTTGTTGGGAGGAGTATTGTTGATAACATTCTGCTTTGTCAGGAGATGGTGGGGGATTATCATGGTTCTTCG
GGTCCGCCTAGGTGTGCGATGAAGCTTGTTGCTTGCTATTAG
Protein sequenceShow/hide protein sequence
MEEFDLAIRHADLVEPAVQGNWFTWTSKDTSFSDVVSSVWVRRLGVSPLVSLMQNLHYLKPVLRRHFGRHISGLSEEVCLAKEAMDRAQREVERDPGSVERSRDASVATD
AFWSAIRQEEASLRKKSWVRWLELGDQNSTFFHRLICSRIGRNNLLSTVDFEGIWVTSHERLMQEEVVQFRWTEECCHALQAPIRREEIRRVVFAMDSSKAPGLDGFSAG
FFKAAWNTVSEDFCDVVMHFFETCYLPHGVNATAITLIPKRNGADRMEDYRPISCCNVVYKCISKILADRLRVWLHSFISGNQSTYVVGRSIVDNILLCQEMVGDYHGSS
GPPRCAMKLVACY