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PI0028942 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028942
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionActin-related protein 2/3 complex subunit
Genome locationchr04:23850950..23853033
RNA-Seq ExpressionPI0028942
SyntenyPI0028942
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR017383 - Actin-related protein 2/3 complex subunit 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061668.1 actin-related protein 2/3 complex subunit 1A-like [Cucumis melo var. makuwa]1.3e-2991.67Show/hide
Query:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
        DSRA  FSDSKFGELIV LDLSFSWAFGVKWSPSGNTL YAGHNSMIYFVDEVG SPLAQNVAFRDLPLRD+
Subjt:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
KAG7012030.1 Actin-related protein 2/3 complex subunit 1A, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-2990.28Show/hide
Query:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
        DSRA  FSDSKFGELIV LDLSFSWAFGVKWSPSGNTL YAGHNSMIYFVDEVG SPLAQ+VAFRDLPLRD+
Subjt:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
XP_008449504.1 PREDICTED: actin-related protein 2/3 complex subunit 1A-like [Cucumis melo]1.3e-2991.67Show/hide
Query:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
        DSRA  FSDSKFGELIV LDLSFSWAFGVKWSPSGNTL YAGHNSMIYFVDEVG SPLAQNVAFRDLPLRD+
Subjt:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
XP_023553744.1 actin-related protein 2/3 complex subunit 1B-like isoform X1 [Cucurbita pepo subsp. pepo]8.2e-2990.28Show/hide
Query:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
        DSRA  FSDSKFGELIV LDLSFSWAFGVKWSPSGNTL YAGHNSMIYFVDEVG SPLAQ+VAFRDLPLRD+
Subjt:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
XP_038886984.1 actin-related protein 2/3 complex subunit 1A-like [Benincasa hispida]1.3e-2991.67Show/hide
Query:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
        DSRA  FSDSKFGELIV LDLSFSWAFGVKWSPSGNTL YAGHNSMIYFVDEVG SPLAQNVAFRDLPLRD+
Subjt:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
TrEMBL top hitse value%identityAlignment
A0A1S3BM68 Actin-related protein 2/3 complex subunit6.1e-3091.67Show/hide
Query:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
        DSRA  FSDSKFGELIV LDLSFSWAFGVKWSPSGNTL YAGHNSMIYFVDEVG SPLAQNVAFRDLPLRD+
Subjt:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
A0A2P2L110 Uncharacterized protein MANES_01G1292001.4e-2984.21Show/hide
Query:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDVGQHP
        DS+A   SDSKFGE I+ LDLSFSWAFGVKWSPSGNTL Y GH+SMIYFVD+VG SPLAQNVAFRDLPLRDVGQHP
Subjt:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDVGQHP
A0A5A7V268 Actin-related protein 2/3 complex subunit6.1e-3091.67Show/hide
Query:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
        DSRA  FSDSKFGELIV LDLSFSWAFGVKWSPSGNTL YAGHNSMIYFVDEVG SPLAQNVAFRDLPLRD+
Subjt:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
A0A6J1HZV6 Actin-related protein 2/3 complex subunit4.0e-2990.28Show/hide
Query:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
        DSRA  FSDSKFGELIV LDLSFSWAFGVKWSPSGNTL YAGHNSMIYFVDEVG SPLAQ+VAFRDLPLRD+
Subjt:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
A0A6J1I2I5 Actin-related protein 2/3 complex subunit4.0e-2990.28Show/hide
Query:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
        DSRA  FSDSKFGELIV LDLSFSWAFGVKWSPSGNTL YAGHNSMIYFVDEVG SPLAQ+VAFRDLPLRD+
Subjt:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
SwissProt top hitse value%identityAlignment
O80856 Actin-related protein 2/3 complex subunit 1A1.8e-2676.39Show/hide
Query:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
        DS+A   +++KFGE I+ LDLS+SWAFGVKWSPSGNTL Y GH+SMIYFVD+VG SPLAQ+VAFRDLPLRDV
Subjt:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
O96622 Actin-related protein 2/3 complex subunit 11.2e-0634.85Show/hide
Query:  FSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
        + +  FGE +   D   SW   +KWSPSG+TL Y+ H+ +    +     P  + +  R+LPLRD+
Subjt:  FSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
Q9SJW6 Actin-related protein 2/3 complex subunit 1B1.8e-2676.39Show/hide
Query:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
        DS+A   +++KFGE I+ LDLS+SWAFGVKWSPSGNTL Y GH+SMIYFVD+VG SPLAQ+VAFRDLPLRDV
Subjt:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
Arabidopsis top hitse value%identityAlignment
AT2G30910.1 actin-related protein C1A1.3e-2776.39Show/hide
Query:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
        DS+A   +++KFGE I+ LDLS+SWAFGVKWSPSGNTL Y GH+SMIYFVD+VG SPLAQ+VAFRDLPLRDV
Subjt:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
AT2G30910.2 actin-related protein C1A1.4e-2384.21Show/hide
Query:  IVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
        I+ LDLS+SWAFGVKWSPSGNTL Y GH+SMIYFVD+VG SPLAQ+VAFRDLPLRDV
Subjt:  IVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
AT2G30910.3 actin-related protein C1A1.3e-2776.39Show/hide
Query:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
        DS+A   +++KFGE I+ LDLS+SWAFGVKWSPSGNTL Y GH+SMIYFVD+VG SPLAQ+VAFRDLPLRDV
Subjt:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
AT2G31300.1 actin-related protein C1B1.3e-2776.39Show/hide
Query:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV
        DS+A   +++KFGE I+ LDLS+SWAFGVKWSPSGNTL Y GH+SMIYFVD+VG SPLAQ+VAFRDLPLRDV
Subjt:  DSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTTCACATTAAATCTCGGGGGGATTCCAACTGAGATTGCCCGAGAAAGTCAAATGAGGGAACAAAAGACCCGAAGCAGGCTATTAAGTGCAATAAGAAAGGATAG
CAAATCCCAAGCCCCATCTTCGCAACAGAATGCCGTCAAAACCCCAACGTCGTTAGAACTGTCGCTAAGATCCTCGACACTCCATGGATTTCACTCCTTCACCCTCTCAA
TCAACCTCAAAATCGCCTTGGTCGTCTCTCGTTTCTCCACATCTGATGAAGACATATATGAAGACAAGCCTCTAGATCTTCTCTCTTCGACTAATCCAATGCTTGAGAAG
ATGATATTGCTGACCAACATCAGTCTTGTTGTTTCGCATTTCTCTAGAGGCTTCTCCAACACTCTTAAGTTTAAACAATTCAATCCATGGGATTCAAGAGCAAGCATATT
TTCTGATTCAAAATTTGGAGAGTTAATTGTTCCGCTTGATCTCTCATTCTCTTGGGCATTTGGCGTGAAGTGGTCTCCAAGTGGGAATACCTTAGTTTATGCAGGTCACA
ATTCCATGATTTACTTCGTAGATGAAGTTGGTGCTTCTCCTCTAGCCCAGAATGTTGCATTCCGAGATTTGCCTCTTCGTGATGTGGGTCAACATCCATTTTTCTTTACT
CTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACTTCACATTAAATCTCGGGGGGATTCCAACTGAGATTGCCCGAGAAAGTCAAATGAGGGAACAAAAGACCCGAAGCAGGCTATTAAGTGCAATAAGAAAGGATAG
CAAATCCCAAGCCCCATCTTCGCAACAGAATGCCGTCAAAACCCCAACGTCGTTAGAACTGTCGCTAAGATCCTCGACACTCCATGGATTTCACTCCTTCACCCTCTCAA
TCAACCTCAAAATCGCCTTGGTCGTCTCTCGTTTCTCCACATCTGATGAAGACATATATGAAGACAAGCCTCTAGATCTTCTCTCTTCGACTAATCCAATGCTTGAGAAG
ATGATATTGCTGACCAACATCAGTCTTGTTGTTTCGCATTTCTCTAGAGGCTTCTCCAACACTCTTAAGTTTAAACAATTCAATCCATGGGATTCAAGAGCAAGCATATT
TTCTGATTCAAAATTTGGAGAGTTAATTGTTCCGCTTGATCTCTCATTCTCTTGGGCATTTGGCGTGAAGTGGTCTCCAAGTGGGAATACCTTAGTTTATGCAGGTCACA
ATTCCATGATTTACTTCGTAGATGAAGTTGGTGCTTCTCCTCTAGCCCAGAATGTTGCATTCCGAGATTTGCCTCTTCGTGATGTGGGTCAACATCCATTTTTCTTTACT
CTTTGA
Protein sequenceShow/hide protein sequence
MNFTLNLGGIPTEIARESQMREQKTRSRLLSAIRKDSKSQAPSSQQNAVKTPTSLELSLRSSTLHGFHSFTLSINLKIALVVSRFSTSDEDIYEDKPLDLLSSTNPMLEK
MILLTNISLVVSHFSRGFSNTLKFKQFNPWDSRASIFSDSKFGELIVPLDLSFSWAFGVKWSPSGNTLVYAGHNSMIYFVDEVGASPLAQNVAFRDLPLRDVGQHPFFFT
L