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PI0028968 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028968
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA-directed RNA polymerase I subunit RPA1-like
Genome locationchr06:15789708..15791581
RNA-Seq ExpressionPI0028968
SyntenyPI0028968
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038287.1 DNA-directed RNA polymerase I subunit RPA1-like [Cucumis melo var. makuwa]4.1e-1069.81Show/hide
Query:  EKQIKKEKEVKNHINLQHLDILDHEETFKDYPWGRLSYIRTYQFFKKASYNDK
        +K    +K   NHINL HLDIL++EE FK YPWGRLSYI TYQF KKASYNDK
Subjt:  EKQIKKEKEVKNHINLQHLDILDHEETFKDYPWGRLSYIRTYQFFKKASYNDK
TrEMBL top hitse value%identityAlignment
A0A5A7T9I0 DNA-directed RNA polymerase I subunit RPA1-like2.0e-1069.81Show/hide
Query:  EKQIKKEKEVKNHINLQHLDILDHEETFKDYPWGRLSYIRTYQFFKKASYNDK
        +K    +K   NHINL HLDIL++EE FK YPWGRLSYI TYQF KKASYNDK
Subjt:  EKQIKKEKEVKNHINLQHLDILDHEETFKDYPWGRLSYIRTYQFFKKASYNDK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAACAAACACCAAACACCACTTAAACCAAGTCCATGTGTATCAGTGGTATCGAGCCGTCGGATTGGTGCAAGGTCTAGGCATTCCGAATATTTTGATGGTGAGCAA
GAAGCAAGCAACATCAACTAGCAAAACAATGAAATCTAAAGGAAAGACACAAGAAAAACAAATTAAGAAAGAAAAAGAAGTGAAGAACCACATCAATCTTCAACATCTAG
ACATATTGGATCATGAAGAAACCTTCAAAGACTATCCATGGGGAAGATTATCTTACATCCGAACATATCAGTTCTTCAAGAAAGCATCATACAACGATAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAACAAACACCAAACACCACTTAAACCAAGTCCATGTGTATCAGTGGTATCGAGCCGTCGGATTGGTGCAAGGTCTAGGCATTCCGAATATTTTGATGGTGAGCAA
GAAGCAAGCAACATCAACTAGCAAAACAATGAAATCTAAAGGAAAGACACAAGAAAAACAAATTAAGAAAGAAAAAGAAGTGAAGAACCACATCAATCTTCAACATCTAG
ACATATTGGATCATGAAGAAACCTTCAAAGACTATCCATGGGGAAGATTATCTTACATCCGAACATATCAGTTCTTCAAGAAAGCATCATACAACGATAAATGA
Protein sequenceShow/hide protein sequence
MRTNTKHHLNQVHVYQWYRAVGLVQGLGIPNILMVSKKQATSTSKTMKSKGKTQEKQIKKEKEVKNHINLQHLDILDHEETFKDYPWGRLSYIRTYQFFKKASYNDK