; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0028977 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0028977
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr04:32027659..32028479
RNA-Seq ExpressionPI0028977
SyntenyPI0028977
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.7e-9972.9Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVKQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYDSGVGQSSDFG GYYNS+AG SS++FGQ YYDLG+DPSSSYMHGHGRGRG+HNEYLY
Subjt:  QEPDELEEVEQQVQEVPPVKQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY

Query:  YEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH
        YE PA V EQ DE                QQQEN E ++QQRV  RRRQPARNRRRP CGTH
Subjt:  YEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.2e-9973.28Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYINWY+NI++LYIT+PGA + HLRSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVKQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYDS VGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEYLY
Subjt:  QEPDELEEVEQQVQEVPPVKQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY

Query:  YEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH
        YE PA V EQ +E                QQQENQE ++QQRV  RRRQPARNRRRP CGTH
Subjt:  YEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.7e-9972.9Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVKQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYDSGVGQSSDFG GYYNS+AG SS++FGQ YYDLG+DPSSSYMHGHGRGRG+HNEYLY
Subjt:  QEPDELEEVEQQVQEVPPVKQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY

Query:  YEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH
        YE PA V EQ DE                QQQEN E ++QQRV  RRRQPARNRRRP CGTH
Subjt:  YEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.6e-9470.45Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN+RLR++ADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPV--KQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY
        QE D+LEEV+Q  +EVPP+   QTQS    VSP+MMMP FG  YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEY
Subjt:  QEPDELEEVEQQVQEVPPV--KQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY

Query:  LYYEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH
        LYY+ PA V EQ DE                QQQEN E ++QQRV  RRRQ A+NR+RP CGTH
Subjt:  LYYEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH

XP_008449513.1 PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo]1.6e-9470.45Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN+RLR++ADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPV--KQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY
        QE D+LEEV+Q  +EVPP+   QTQS    VSP+MMMP FG  YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEY
Subjt:  QEPDELEEVEQQVQEVPPV--KQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY

Query:  LYYEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH
        LYY+ PA V EQ DE                QQQEN E ++QQRV  RRRQ A+NR+RP CGTH
Subjt:  LYYEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH

TrEMBL top hitse value%identityAlignment
A0A1S3BLK4 mediator of RNA polymerase II transcription subunit 12-like isoform X17.9e-9570.45Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN+RLR++ADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPV--KQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY
        QE D+LEEV+Q  +EVPP+   QTQS    VSP+MMMP FG  YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEY
Subjt:  QEPDELEEVEQQVQEVPPV--KQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY

Query:  LYYEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH
        LYY+ PA V EQ DE                QQQEN E ++QQRV  RRRQ A+NR+RP CGTH
Subjt:  LYYEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH

A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein1.8e-9972.9Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVKQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYDSGVGQSSDFG GYYNS+AG SS++FGQ YYDLG+DPSSSYMHGHGRGRG+HNEYLY
Subjt:  QEPDELEEVEQQVQEVPPVKQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY

Query:  YEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH
        YE PA V EQ DE                QQQEN E ++QQRV  RRRQPARNRRRP CGTH
Subjt:  YEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.1e-9973.28Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYINWY+NI++LYIT+PGA + HLRSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVKQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYDS VGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEYLY
Subjt:  QEPDELEEVEQQVQEVPPVKQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY

Query:  YEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH
        YE PA V EQ +E                QQQENQE ++QQRV  RRRQPARNRRRP CGTH
Subjt:  YEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein1.8e-9972.9Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVKQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYDSGVGQSSDFG GYYNS+AG SS++FGQ YYDLG+DPSSSYMHGHGRGRG+HNEYLY
Subjt:  QEPDELEEVEQQVQEVPPVKQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY

Query:  YEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH
        YE PA V EQ DE                QQQEN E ++QQRV  RRRQPARNRRRP CGTH
Subjt:  YEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X17.9e-9570.45Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN+RLR++ADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPV--KQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY
        QE D+LEEV+Q  +EVPP+   QTQS    VSP+MMMP FG  YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEY
Subjt:  QEPDELEEVEQQVQEVPPV--KQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY

Query:  LYYEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH
        LYY+ PA V EQ DE                QQQEN E ++QQRV  RRRQ A+NR+RP CGTH
Subjt:  LYYEPPATVLEQPDE----------------QQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATGCTCGTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAGAAATATTACCAGGCT
CTATATCACTCGACCGGGAGCAGCTGTAGGTCATCTGAGGTCGAACAATAGTAGACTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAATAACG
AGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAA
CAACAAGTGCAAGAAGTGCCTCCTGTGAAACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATGATGATGATGCCGGCATTTGGAACAGGATATTATGATTCAGGAGT
CGGTCAATCGTCAGACTTCGGGACAGGATATTATAATTCAGAGGCAGGTCCATCGTCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCGTCTTCAT
ACATGCATGGACATGGGCGTGGTCGTGGAGAACATAACGAATATTTGTACTACGAACCACCTGCAACGGTACTCGAGCAGCCAGATGAGCAACAACAAGAGAATCAGGAG
GGACTAGAGCAACAAAGAGTGCATGATCGACGACGGCAACCAGCAAGAAATCGGCGACGTCCAGATTGTGGAACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATGCTCGTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAGAAATATTACCAGGCT
CTATATCACTCGACCGGGAGCAGCTGTAGGTCATCTGAGGTCGAACAATAGTAGACTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAATAACG
AGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAA
CAACAAGTGCAAGAAGTGCCTCCTGTGAAACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATGATGATGATGCCGGCATTTGGAACAGGATATTATGATTCAGGAGT
CGGTCAATCGTCAGACTTCGGGACAGGATATTATAATTCAGAGGCAGGTCCATCGTCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCGTCTTCAT
ACATGCATGGACATGGGCGTGGTCGTGGAGAACATAACGAATATTTGTACTACGAACCACCTGCAACGGTACTCGAGCAGCCAGATGAGCAACAACAAGAGAATCAGGAG
GGACTAGAGCAACAAAGAGTGCATGATCGACGACGGCAACCAGCAAGAAATCGGCGACGTCCAGATTGTGGAACACATTGA
Protein sequenceShow/hide protein sequence
MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVE
QQVQEVPPVKQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLYYEPPATVLEQPDEQQQENQE
GLEQQRVHDRRRQPARNRRRPDCGTH