CuGenDBv2

Gene ID	PI0028978
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Protein Ycf2-like
Genome location	chr02:24771035..24772024
RNA-Seq Expression	PI0028978
Synteny	PI0028978
Gene Ontology terms	GO:0110165 - cellular anatomical structure (cellular component)
InterPro domains	IPR015410 - Domain of unknown function DUF1985

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031317.1 uncharacterized protein E6C27_scaffold139G00700 [Cucumis melo var. makuwa]

1.8e-29

40.31

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Query:  KHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSS----------IFLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDW
        KH+KMLDD+EKF++YPWGR+ F LT ++ +  V +K  S           FLQGFP+ L YWA+E++P+L++   G+  RI     PRI+ WES E  DW
Subjt:  KHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSS----------IFLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDW

Query:  QHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRS-MGRKIASLEEDIENLKQGQEEIKKHINENHKEILDML
        Q + ++IF     SVVP + +E E++S Y+ YF+E  L+  ++++E    K S M  +I+SL EDI++LK+  +E  + + +  +EI+ +L
Subjt:  QHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRS-MGRKIASLEEDIENLKQGQEEIKKHINENHKEILDML

KAA0059898.1 uncharacterized protein E6C27_scaffold108G001930 [Cucumis melo var. makuwa]

4.5e-28

42.69

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Query:  KHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSS----------IFLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDW
        KH+KMLDD+EKF++YPWGR+ F LT ++ +  V +K  S           FLQGFP+ L YWA+E++P+L++   G+  RI     PRI+ WES E  DW
Subjt:  KHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSS----------IFLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDW

Query:  QHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRS-MGRKIASLEEDIENLKQ
        Q + ++IF     SVVP + +E E++S Y+ YF+E  L+  ++++E    K S M  +I+SL EDI++LK+
Subjt:  QHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRS-MGRKIASLEEDIENLKQ

TYK08201.1 40S ribosomal protein S15-4 [Cucumis melo var. makuwa]

1.8e-29

40.31

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Query:  KHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSS----------IFLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDW
        KH+KMLDD+EKF++YPWGR+ F LT ++ +  V +K  S           FLQGFP+ L YWA+E++P+L++   G+  RI     PRI+ WES E  DW
Subjt:  KHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSS----------IFLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDW

Query:  QHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRS-MGRKIASLEEDIENLKQGQEEIKKHINENHKEILDML
        Q + ++IF     SVVP + +E E++S Y+ YF+E  L+  ++++E    K S M  +I+SL EDI++LK+  +E  + + +  +EI+ +L
Subjt:  QHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRS-MGRKIASLEEDIENLKQGQEEIKKHINENHKEILDML

TYK22453.1 uncharacterized protein E5676_scaffold3009G00010 [Cucumis melo var. makuwa]

1.8e-29

40.31

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Query:  KHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSS----------IFLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDW
        KH+KMLDD+EKF++YPWGR+ F LT ++ +  V +K  S           FLQGFP+ L YWA+E++P+L++   G+  RI     PRI+ WES E  DW
Subjt:  KHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSS----------IFLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDW

Query:  QHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRS-MGRKIASLEEDIENLKQGQEEIKKHINENHKEILDML
        Q + ++IF     SVVP + +E E++S Y+ YF+E  L+  ++++E    K S M  +I+SL EDI++LK+  +E  + + +  +EI+ +L
Subjt:  QHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRS-MGRKIASLEEDIENLKQGQEEIKKHINENHKEILDML

XP_038891747.1 pescadillo homolog [Benincasa hispida]

3.6e-46

57.06

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Query:  MLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSSIFLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDWQHINNSIFKASGFS
        MLDDEE+F+SYPWGRVSFELT+E+FKK V+NKPSSIFLQGFPL LVYWAFE+IP+LSNPT+GFA+RI+SD GPR+ QWESQEP DWQHINN+IFKA+G  
Subjt:  MLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSSIFLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDWQHINNSIFKASGFS

Query:  VVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRSMGRKIASLEEDIENLKQGQEEIKKHINENHKEILDMLG
                                                          IE LK+GQE+IKK INE HKEILD+LG
Subjt:  VVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRSMGRKIASLEEDIENLKQGQEEIKKHINENHKEILDMLG

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UXF1 Uncharacterized protein

2.2e-28

42.69

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Query:  KHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSS----------IFLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDW
        KH+KMLDD+EKF++YPWGR+ F LT ++ +  V +K  S           FLQGFP+ L YWA+E++P+L++   G+  RI     PRI+ WES E  DW
Subjt:  KHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSS----------IFLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDW

Query:  QHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRS-MGRKIASLEEDIENLKQ
        Q + ++IF     SVVP + +E E++S Y+ YF+E  L+  ++++E    K S M  +I+SL EDI++LK+
Subjt:  QHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRS-MGRKIASLEEDIENLKQ

A0A5A7VIA9 Uncharacterized protein

8.8e-30

40.31

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Query:  KHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSS----------IFLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDW
        KH+KMLDD+EKF++YPWGR+ F LT ++ +  V +K  S           FLQGFP+ L YWA+E++P+L++   G+  RI     PRI+ WES E  DW
Subjt:  KHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSS----------IFLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDW

Query:  QHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRS-MGRKIASLEEDIENLKQGQEEIKKHINENHKEILDML
        Q + ++IF     SVVP + +E E++S Y+ YF+E  L+  ++++E    K S M  +I+SL EDI++LK+  +E  + + +  +EI+ +L
Subjt:  QHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRS-MGRKIASLEEDIENLKQGQEEIKKHINENHKEILDML

A0A5D3C8N2 40S ribosomal protein S15-4

8.8e-30

40.31

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Query:  KHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSS----------IFLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDW
        KH+KMLDD+EKF++YPWGR+ F LT ++ +  V +K  S           FLQGFP+ L YWA+E++P+L++   G+  RI     PRI+ WES E  DW
Subjt:  KHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSS----------IFLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDW

Query:  QHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRS-MGRKIASLEEDIENLKQGQEEIKKHINENHKEILDML
        Q + ++IF     SVVP + +E E++S Y+ YF+E  L+  ++++E    K S M  +I+SL EDI++LK+  +E  + + +  +EI+ +L
Subjt:  QHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRS-MGRKIASLEEDIENLKQGQEEIKKHINENHKEILDML

A0A5D3DCN3 Protein Ycf2-like

7.0e-27

35.55

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Query:  VRNFFFKTNKKIVRSELQPTFKCLASNATVPIDLKVKLANLYFLETFLIPTQGHNKVSWKHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNK-PSSI
        ++  +F+  K + R  L   F    +      D K+K+A LYFLE FLIP Q    V W ++ M+DD+E F  YPWGRV+FEL +++  + V +K  + I
Subjt:  VRNFFFKTNKKIVRSELQPTFKCLASNATVPIDLKVKLANLYFLETFLIPTQGHNKVSWKHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNK-PSSI

Query:  FLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDWQHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGE
         + GF   ++ WA+EVIP LS P   FA RI S+  PRI+ W +     W+ +   +F +    V P + T +E+   ++A F+E   K++  E E E  
Subjt:  FLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDWQHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGE

Query:  KRSMGRKIASL
        K      IAS+
Subjt:  KRSMGRKIASL

A0A5D3DFX6 Uncharacterized protein

8.8e-30

40.31

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Query:  KHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSS----------IFLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDW
        KH+KMLDD+EKF++YPWGR+ F LT ++ +  V +K  S           FLQGFP+ L YWA+E++P+L++   G+  RI     PRI+ WES E  DW
Subjt:  KHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSS----------IFLQGFPLALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDW

Query:  QHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRS-MGRKIASLEEDIENLKQGQEEIKKHINENHKEILDML
        Q + ++IF     SVVP + +E E++S Y+ YF+E  L+  ++++E    K S M  +I+SL EDI++LK+  +E  + + +  +EI+ +L
Subjt:  QHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRS-MGRKIASLEEDIENLKQGQEEIKKHINENHKEILDML

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G07240.1 cysteine-type peptidases;cysteine-type peptidases

5.5e-08

30.34

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Query:  DLKVKLANLYFLETFLIPTQGHNKVSWKHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNK--PSSIFLQGFPLALVYWAFEVIPKL
        +++++ A L  ++ FL+PT  + K+   H +M +D + F SYPWGR+SFE+ +   K+  + +   + + +QG   AL     E +P +
Subjt:  DLKVKLANLYFLETFLIPTQGHNKVSWKHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNK--PSSIFLQGFPLALVYWAFEVIPKL

AT3G32960.1 Domain of unknown function (DUF1985)

2.1e-07

27.52

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Query:  LANLYFLETFLIPTQGHNKVSWKHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGV---LNKPSSIFLQGFPLALVYWAFEVIPKL----------SNPTV
        LA L  +E+  +      K   ++L+   D EK  +YPWG  +F + +   KK V   + KP    + GFPLAL  W  E IP L            PT 
Subjt:  LANLYFLETFLIPTQGHNKVSWKHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGV---LNKPSSIFLQGFPLALVYWAFEVIPKL----------SNPTV

Query:  GFAKRIQSDHGPRIVQWESQEPEDWQHINNSIFKASGFSVVPFIPTENE
           ++  S   P++ Q ++ E         + +    F ++P IP + E
Subjt:  GFAKRIQSDHGPRIVQWESQEPEDWQHINNSIFKASGFSVVPFIPTENE

Sequences

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CDS sequence

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ATGGAAAACACAGTTAGGAATTTTTTCTTTAAGACAAACAAGAAAATTGTAAGGAGTGAGCTGCAACCAACCTTTAAGTGTTTAGCTTCTAATGCTACTGTACCCATTGA
TCTTAAAGTGAAGCTTGCCAATTTGTACTTCTTGGAGACCTTCCTAATTCCTACACAAGGACACAATAAAGTAAGTTGGAAGCACCTGAAAATGTTGGATGATGAAGAAA
AATTTAAATCTTATCCATGGGGTAGAGTATCTTTTGAACTAACTTTAGAGTATTTTAAGAAGGGTGTCCTCAACAAACCATCATCGATTTTTCTACAAGGATTTCCTCTT
GCCCTGGTTTATTGGGCTTTTGAGGTAATACCAAAACTATCAAATCCTACTGTTGGATTTGCAAAAAGAATACAAAGTGATCATGGGCCAAGAATTGTTCAATGGGAGTC
GCAAGAACCGGAAGATTGGCAACACATCAATAACAGCATCTTCAAAGCCTCTGGTTTTTCTGTTGTTCCGTTTATTCCAACGGAAAATGAATTACAATCAAGCTATTATG
CCTATTTTGTGGAGCAATCATTGAAGGAGATGGAGATGGAAAAGGAGCAAGAAGGAGAAAAAAGATCAATGGGAAGAAAAATAGCTTCATTAGAGGAAGACATTGAAAAT
TTGAAACAGGGACAAGAAGAGATCAAAAAGCACATCAATGAAAATCATAAAGAGATACTTGACATGTTGGGCTAG

mRNA sequence

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Protein sequence

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MENTVRNFFFKTNKKIVRSELQPTFKCLASNATVPIDLKVKLANLYFLETFLIPTQGHNKVSWKHLKMLDDEEKFKSYPWGRVSFELTLEYFKKGVLNKPSSIFLQGFPL
ALVYWAFEVIPKLSNPTVGFAKRIQSDHGPRIVQWESQEPEDWQHINNSIFKASGFSVVPFIPTENELQSSYYAYFVEQSLKEMEMEKEQEGEKRSMGRKIASLEEDIEN
LKQGQEEIKKHINENHKEILDMLG

PI0028978 (gene) of Melon (PI 482460) v1 genome