CuGenDBv2

Gene ID	PI0029034
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	transcription factor ABORTED MICROSPORES-like isoform X1
Genome location	chr01:5172505..5173861
RNA-Seq Expression	PI0029034
Synteny	PI0029034
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7011772.1 Transcription factor ABORTED MICROSPORES [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-64

57.72

Show/hide

Query:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG
        +GEEKDLVK ENGRSDSI DC DQIDDEDDAIAKY + T Q PQSKNLV E            NLRALV KI                       K+LQ 
Subjt:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG

Query:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--
        ELEEH DDE+GK VVSG  GN NSVQLPEFL                 GS+LK+NHQD E             VEVAQIDGNEFFVK+      GG    
Subjt:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--

Query:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMD
            NALGLEVTNAN+TS RGLVSNVFKVGKKDSE  QADDVR SL E+TKYPCRGW+ I+KAP+CIGS M+
Subjt:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMD

XP_022953121.1 transcription factor ABORTED MICROSPORES-like isoform X1 [Cucurbita moschata]

1.2e-64

57.72

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Query:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG
        +GEEKDLVK ENGRSDSI DC DQIDDEDDAIAKY + T Q PQSKNLV E            NLRALV KI                       K+LQ 
Subjt:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG

Query:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--
        ELEEH DDE+GK VVSG  GN NSVQLPEFL                 GS+LK+NHQD E             VEVAQIDGNEFFVK+      GG    
Subjt:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--

Query:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMD
            NALGLEVTNAN+TS RGLVSNVFKVGKKDSE  QADDVR SL E+TKYPCRGW+ I+KAP+CIGS M+
Subjt:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMD

XP_022953123.1 transcription factor ABORTED MICROSPORES-like isoform X2 [Cucurbita moschata]

1.2e-64

57.72

Show/hide

Query:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG
        +GEEKDLVK ENGRSDSI DC DQIDDEDDAIAKY + T Q PQSKNLV E            NLRALV KI                       K+LQ 
Subjt:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG

Query:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--
        ELEEH DDE+GK VVSG  GN NSVQLPEFL                 GS+LK+NHQD E             VEVAQIDGNEFFVK+      GG    
Subjt:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--

Query:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMD
            NALGLEVTNAN+TS RGLVSNVFKVGKKDSE  QADDVR SL E+TKYPCRGW+ I+KAP+CIGS M+
Subjt:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMD

XP_022969471.1 transcription factor ABORTED MICROSPORES-like isoform X1 [Cucurbita maxima]

8.8e-65

57.72

Show/hide

Query:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG
        +GEEKDLVK ENGRSDSI DC DQIDDEDDAIAKY + T Q PQSKNLV E            NLRALV KI                       K+LQ 
Subjt:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG

Query:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--
        ELEEH DDE+GK VVSG  GN NSVQLPEFL                 GS+LK+NHQD E             VEVAQIDGNEFFVK+      GG    
Subjt:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--

Query:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMD
            NALGLEVTNAN+TS RGLVSNVFKVGKKDSE  QADDVR SL E+TKYPCRGW+ I+KAP+CIGS M+
Subjt:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMD

XP_022969474.1 transcription factor ABORTED MICROSPORES-like isoform X2 [Cucurbita maxima]

8.8e-65

57.72

Show/hide

Query:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG
        +GEEKDLVK ENGRSDSI DC DQIDDEDDAIAKY + T Q PQSKNLV E            NLRALV KI                       K+LQ 
Subjt:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG

Query:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--
        ELEEH DDE+GK VVSG  GN NSVQLPEFL                 GS+LK+NHQD E             VEVAQIDGNEFFVK+      GG    
Subjt:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--

Query:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMD
            NALGLEVTNAN+TS RGLVSNVFKVGKKDSE  QADDVR SL E+TKYPCRGW+ I+KAP+CIGS M+
Subjt:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMD

TrEMBL top hits

e value

%identity

Alignment

A0A6J1C378 transcription factor ABORTED MICROSPORES

3.1e-63

56.04

Show/hide

Query:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG
        +GEEKDLVK ENGRSDSI DC DQIDDEDDA+AKY + T Q PQSKNLV E            NLRALV KI                       K+LQ 
Subjt:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG

Query:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--
        ELEEH DDE+GK  ++G  GN NSV LPE L                 GSLLK+NHQD E             VEVAQIDGNEFFVK+      GG    
Subjt:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--

Query:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMDY
            NALGLEVTNAN+TS RGLVSNVFKVGKKDSE  QADDVR SL E+TKYPCRGWS + KAP C+GS MDY
Subjt:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMDY

A0A6J1GMC3 transcription factor ABORTED MICROSPORES-like isoform X1

5.6e-65

57.72

Show/hide

Query:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG
        +GEEKDLVK ENGRSDSI DC DQIDDEDDAIAKY + T Q PQSKNLV E            NLRALV KI                       K+LQ 
Subjt:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG

Query:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--
        ELEEH DDE+GK VVSG  GN NSVQLPEFL                 GS+LK+NHQD E             VEVAQIDGNEFFVK+      GG    
Subjt:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--

Query:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMD
            NALGLEVTNAN+TS RGLVSNVFKVGKKDSE  QADDVR SL E+TKYPCRGW+ I+KAP+CIGS M+
Subjt:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMD

A0A6J1GMI0 transcription factor ABORTED MICROSPORES-like isoform X2

5.6e-65

57.72

Show/hide

Query:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG
        +GEEKDLVK ENGRSDSI DC DQIDDEDDAIAKY + T Q PQSKNLV E            NLRALV KI                       K+LQ 
Subjt:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG

Query:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--
        ELEEH DDE+GK VVSG  GN NSVQLPEFL                 GS+LK+NHQD E             VEVAQIDGNEFFVK+      GG    
Subjt:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--

Query:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMD
            NALGLEVTNAN+TS RGLVSNVFKVGKKDSE  QADDVR SL E+TKYPCRGW+ I+KAP+CIGS M+
Subjt:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMD

A0A6J1HXW2 transcription factor ABORTED MICROSPORES-like isoform X1

4.3e-65

57.72

Show/hide

Query:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG
        +GEEKDLVK ENGRSDSI DC DQIDDEDDAIAKY + T Q PQSKNLV E            NLRALV KI                       K+LQ 
Subjt:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG

Query:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--
        ELEEH DDE+GK VVSG  GN NSVQLPEFL                 GS+LK+NHQD E             VEVAQIDGNEFFVK+      GG    
Subjt:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--

Query:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMD
            NALGLEVTNAN+TS RGLVSNVFKVGKKDSE  QADDVR SL E+TKYPCRGW+ I+KAP+CIGS M+
Subjt:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMD

A0A6J1I2P7 transcription factor ABORTED MICROSPORES-like isoform X2

4.3e-65

57.72

Show/hide

Query:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG
        +GEEKDLVK ENGRSDSI DC DQIDDEDDAIAKY + T Q PQSKNLV E            NLRALV KI                       K+LQ 
Subjt:  KGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDE------------NLRALVLKIP----------------------KDLQG

Query:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--
        ELEEH DDE+GK VVSG  GN NSVQLPEFL                 GS+LK+NHQD E             VEVAQIDGNEFFVK+      GG    
Subjt:  ELEEHPDDESGKIVVSGTKGNLNSVQLPEFLE---------------GGSLLKKNHQDIE-------------VEVAQIDGNEFFVKI-----NGGLK--

Query:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMD
            NALGLEVTNAN+TS RGLVSNVFKVGKKDSE  QADDVR SL E+TKYPCRGW+ I+KAP+CIGS M+
Subjt:  ----NALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMD

SwissProt top hits

e value

%identity

Alignment

Q6YUS3 Transcription factor TDR

4.6e-08

48.81

Show/hide

Query:  EVEVAQIDGNEFFVKI-----NGGL------KNALGLEVTNANMTSCRGLVSNVFKVGKKDSE-NFQADDVRVSLQEVTK--YP
        ++EV Q+ GNE FV++      GG        NALGLEV N N+T+ + LV NVF+V  +DSE   QAD VR SL EVT+  YP
Subjt:  EVEVAQIDGNEFFVKI-----NGGL------KNALGLEVTNANMTSCRGLVSNVFKVGKKDSE-NFQADDVRVSLQEVTK--YP

Q9ZVX2 Transcription factor ABORTED MICROSPORES

5.1e-23

38.68

Show/hide

Query:  EKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDEN------------LRALVLKI----------------------PKDLQGELE
        +KD+  +ENGR DS  DC DQIDDEDD   KY + + +  Q+KNL+ E             LR+LV +I                       K+LQ ELE
Subjt:  EKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDEN------------LRALVLKI----------------------PKDLQGELE

Query:  EHPDDESGK-----------IVVSG------TKGNLNSVQLPEFLEGGSLLKKNHQDIEVEVAQIDGNEFFVKI-----NGGLK------NALGLEVTNA
        E+ + E G             VV+G         N+ SV+    LE  S  K    + +V+VAQ+DG EFFVK+      GG        ++LGLEVTNA
Subjt:  EHPDDESGK-----------IVVSG------TKGNLNSVQLPEFLEGGSLLKKNHQDIEVEVAQIDGNEFFVKI-----NGGLK------NALGLEVTNA

Query:  NMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGW
        N T    LVSNVFKV K D+E  QA+ VR SL E+T+   RGW
Subjt:  NMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGW

Arabidopsis top hits

e value

%identity

Alignment

AT2G16910.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

3.6e-24

38.68

Show/hide

Query:  EKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDEN------------LRALVLKI----------------------PKDLQGELE
        +KD+  +ENGR DS  DC DQIDDEDD   KY + + +  Q+KNL+ E             LR+LV +I                       K+LQ ELE
Subjt:  EKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDEN------------LRALVLKI----------------------PKDLQGELE

Query:  EHPDDESGK-----------IVVSG------TKGNLNSVQLPEFLEGGSLLKKNHQDIEVEVAQIDGNEFFVKI-----NGGLK------NALGLEVTNA
        E+ + E G             VV+G         N+ SV+    LE  S  K    + +V+VAQ+DG EFFVK+      GG        ++LGLEVTNA
Subjt:  EHPDDESGK-----------IVVSG------TKGNLNSVQLPEFLEGGSLLKKNHQDIEVEVAQIDGNEFFVKI-----NGGLK------NALGLEVTNA

Query:  NMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGW
        N T    LVSNVFKV K D+E  QA+ VR SL E+T+   RGW
Subjt:  NMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGW

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTGTACGCTTTTTTTTTCTCTACAATAAGCAAGGGGGAAGAAAAGGACTTAGTCAAAGATGAAAATGGAAGATCTGATTCAATTTTTGATTGCATTGATCAGATTGA
TGATGAAGATGATGCAATCGCAAAGTACCCCCAATGGACTAGGCAGGATCCTCAATCAAAGAACCTTGTTGATGAGAACCTACGAGCATTGGTTCTCAAAATTCCTAAAG
ATCTCCAAGGGGAACTGGAAGAACATCCAGATGATGAAAGTGGTAAGATTGTCGTTTCAGGAACCAAAGGAAATCTCAATAGTGTCCAACTACCTGAGTTTCTAGAAGGT
GGAAGTCTTTTGAAGAAAAATCATCAGGACATTGAAGTGGAAGTGGCACAGATTGATGGGAACGAGTTCTTCGTAAAGATTAATGGAGGCCTTAAAAATGCTCTTGGCTT
GGAAGTAACAAATGCAAATATGACCAGTTGTAGAGGCCTTGTATCTAATGTTTTCAAAGTTGGGAAAAAGGATAGTGAAAATTTTCAAGCAGATGATGTAAGAGTCTCAT
TGCAAGAGGTAACAAAGTACCCATGTAGAGGGTGGTCTGGAATAATCAAGGCACCAAAGTGCATTGGAAGCCACATGGATTACTAG

mRNA sequence

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Protein sequence

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MLYAFFFSTISKGEEKDLVKDENGRSDSIFDCIDQIDDEDDAIAKYPQWTRQDPQSKNLVDENLRALVLKIPKDLQGELEEHPDDESGKIVVSGTKGNLNSVQLPEFLEG
GSLLKKNHQDIEVEVAQIDGNEFFVKINGGLKNALGLEVTNANMTSCRGLVSNVFKVGKKDSENFQADDVRVSLQEVTKYPCRGWSGIIKAPKCIGSHMDY

PI0029034 (gene) of Melon (PI 482460) v1 genome