; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0029065 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0029065
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr11:17994418..18004294
RNA-Seq ExpressionPI0029065
SyntenyPI0029065
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR021109 - Aspartic peptidase domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042457.1 reverse transcriptase [Cucumis melo var. makuwa]1.9e-9751.85Show/hide
Query:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLRE------------------
        M ESRR  TG+MSWDEFKK FFD            NEFL+L QGSMTV +YEKKYT+LSKYA  VIEDE++RC RFEEGL+E                  
Subjt:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLRE------------------

Query:  --EIRNFKSQHS--------------GSSVSKSGSGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGSSKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTT
           +R  KS +                SS+ ++  G   QRSSGSS  I STGGS   RSD VV  S KS+VCYNC QPGHYRR+CPHLIP GNTI KTT
Subjt:  --EIRNFKSQHS--------------GSSVSKSGSGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGSSKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTT

Query:  SQTYA---HVFVDPGATYSFVSLRFAIGVDKMLESPTEELFIST----------LLGDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLS
        S T +         G   S    +  +G  +    P  ++F  T          ++GDSFI NSV+R C V IDGE + VDLI LNI+ F+VILGMDFLS
Subjt:  SQTYA---HVFVDPGATYSFVSLRFAIGVDKMLESPTEELFIST----------LLGDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLS

Query:  NNYASLDCHQKDVVFKCPGKNEIIFRGDRKINPTCVISALKSSKLLRKGCTTYLAHVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLV
        N+YASL+CHQK++VFK PG                            KGCT YLA+V+D QV  LKL DI VVREF DVFP+ELSGLPP+REIEFSI LV
Subjt:  NNYASLDCHQKDVVFKCPGKNEIIFRGDRKINPTCVISALKSSKLLRKGCTTYLAHVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLV

Query:  PRMTPISQAPYIMAPIELKEFKTQLQELVDKG
        P   PISQAPYIMA +EL+E K+Q+QELVDKG
Subjt:  PRMTPISQAPYIMAPIELKEFKTQLQELVDKG

KAA0060484.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]4.0e-12755.72Show/hide
Query:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLREEIR---------------
        M ESRR  TG++SW+EFKK FFD            NEFL+LTQGSMT+A+YEKKYT+LS YA  VIEDE++RC RFEEGLREEIR               
Subjt:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLREEIR---------------

Query:  ----------------------------------------------------NFKSQHSGSSVSKSGSGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGS
                                                            NFKSQ++GSS SKSGS G  QRSSGSS  I STGGS   RSD VV  S
Subjt:  ----------------------------------------------------NFKSQHSGSSVSKSGSGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGS

Query:  SKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTTSQTYAH-----------------------------VFVDPGATYSFVSLRFAIGVDKMLESPTEELF
        SKS+VCYNCGQPGHYRR+CPHLIP GNTI KTTSQT +                              VF       +       +G+DK LES TEEL 
Subjt:  SKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTTSQTYAH-----------------------------VFVDPGATYSFVSLRFAIGVDKMLESPTEELF

Query:  ISTLLGDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLSNNYASLDCHQKDVVFKCPGKNEIIFRGDRKINPTCVISALKSSKLLRKGCT
        IST +GDSFI NSV+R C + IDGE + VDL PLNI+ F+VILGMDFLSN+YASL+CHQK++VFK PG +EI+FRGDRKI  TCVISALK+SKLLRKGCT
Subjt:  ISTLLGDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLSNNYASLDCHQKDVVFKCPGKNEIIFRGDRKINPTCVISALKSSKLLRKGCT

Query:  TYLAHVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLVPRMTPISQAPYIMAPIELKEFKTQLQELVDKG
         YL +V+D QV  LKL DIPVVREF DVFPEELS LPP+REIEFSI LVP  TPISQAPY MAP+EL+E K+QLQELVD G
Subjt:  TYLAHVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLVPRMTPISQAPYIMAPIELKEFKTQLQELVDKG

KAA0067055.1 reverse transcriptase [Cucumis melo var. makuwa]1.4e-12461.99Show/hide
Query:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLREEIRNFKSQHSGSSVSKSG
        M ESR+  T ++SWDEFK  FFD            NEFL+LTQGSMT+A+YEKKYT+LSKYA  VIEDE++RC   EEGL     NFKSQ+SGSS SKSG
Subjt:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLREEIRNFKSQHSGSSVSKSG

Query:  SGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGSSKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTTSQTYAHVF----------------------VDPG
         GGR QRSSGS+  I ST GS   RSD V+  S KS+VCYNCGQ GHYRR+CPHLIP GNTI KTTSQT +                            G
Subjt:  SGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGSSKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTTSQTYAHVF----------------------VDPG

Query:  ATYSFVSLRFA-------IGVDKMLESPTEELFISTLLGDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLSNNYASLDCHQKDVVFKCP
           +      A       IGVDK LES TEEL ISTL+GDSFI NSV+R C + ID E + VDLIPLNI+ F+VILGMDFLSN+YASL+CH+K++VFK P
Subjt:  ATYSFVSLRFA-------IGVDKMLESPTEELFISTLLGDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLSNNYASLDCHQKDVVFKCP

Query:  GKNEIIFRGDRKINPTCVISALKSSKLLRKGCTTYLAHVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLVPRMTPISQAPYIMAPIEL
         K+EIIF GDRKI PT VIS LK+SKLLRKGCT YLA+VMD Q+  LKL DIPVVREF DVFPEELSG+ P+REIEFSI LV  M PISQA Y MAP+EL
Subjt:  GKNEIIFRGDRKINPTCVISALKSSKLLRKGCTTYLAHVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLVPRMTPISQAPYIMAPIEL

Query:  KEFKTQLQELVDK
        +E K+QLQELVDK
Subjt:  KEFKTQLQELVDK

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]1.3e-9848.64Show/hide
Query:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLREEIR---------------
        M ESRR  TG+MSWDEFKK FFD            NEF++LTQG+MTVA+YEKKYT+LSKYA  VI DE +RC RFEEGLREEIR               
Subjt:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLREEIR---------------

Query:  ----------------------------------------------------NFKSQHSGSSVSKSGSGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGS
                                                            +FKSQ+SGSS SKS SGG  QRSS SS +I STGGS   RS+ VV  S
Subjt:  ----------------------------------------------------NFKSQHSGSSVSKSGSGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGS

Query:  SKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTTSQTYAHVFVDPGATYSFVS---------------LRFAIGVDKMLESPTEELFISTLL---------
         KS+VCYNC Q GHYRR+CPHLIP  NTI KTTSQT        G +    S                 FA+   +  ++P      S++          
Subjt:  SKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTTSQTYAHVFVDPGATYSFVS---------------LRFAIGVDKMLESPTEELFISTLL---------

Query:  -GDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLSNNYASLDCHQKDVVFKCPGKNEIIFRGDRKINPTCVISALKSSKLLRKGCTTYLA
         GDSFI NSV+R C + IDGE + VDLIPLNI+ F+VILGMDFLSN+YASL+CHQK++VFK P K+EIIFRG+RKI PT VISALK+SKLLRKGCT YLA
Subjt:  -GDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLSNNYASLDCHQKDVVFKCPGKNEIIFRGDRKINPTCVISALKSSKLLRKGCTTYLA

Query:  HVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLVPRMTPISQAPYIMAPIELKEFKTQLQELVDKG
        HVMD Q+  L L DIP                            VPR TPISQAPY M  +EL+E K+QLQELVDKG
Subjt:  HVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLVPRMTPISQAPYIMAPIELKEFKTQLQELVDKG

TYK22919.1 reverse transcriptase [Cucumis melo var. makuwa]1.6e-9651.62Show/hide
Query:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLRE------------------
        M ESRR  T +MSWDEFKK FFD            NEFL+L QGSMTV +YEKKYT+LSKYA  VIEDE++RC RFEEGL+E                  
Subjt:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLRE------------------

Query:  --EIRNFKSQHS--------------GSSVSKSGSGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGSSKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTT
           +R  KS +                SS+ ++  G   QRSSGSS  I STGGS   RSD VV  S KS+VCYNC QPGHYRR+CPHLIP GNTI KTT
Subjt:  --EIRNFKSQHS--------------GSSVSKSGSGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGSSKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTT

Query:  SQTYA---HVFVDPGATYSFVSLRFAIGVDKMLESPTEELFIST----------LLGDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLS
        S T +         G   S    +  +G  +    P  ++F  T          ++GDSFI NSV+R C V IDGE + VDLI LNI+ F+VILGMDFLS
Subjt:  SQTYA---HVFVDPGATYSFVSLRFAIGVDKMLESPTEELFIST----------LLGDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLS

Query:  NNYASLDCHQKDVVFKCPGKNEIIFRGDRKINPTCVISALKSSKLLRKGCTTYLAHVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLV
        N+YASL+CHQK++VFK PG                            KGCT YLA+V+D QV  LKL DI VVREF DVFP+ELSGLPP+REIEFSI LV
Subjt:  NNYASLDCHQKDVVFKCPGKNEIIFRGDRKINPTCVISALKSSKLLRKGCTTYLAHVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLV

Query:  PRMTPISQAPYIMAPIELKEFKTQLQELVDKG
        P   PISQAPYIMA +EL+E K+Q+QELVDKG
Subjt:  PRMTPISQAPYIMAPIELKEFKTQLQELVDKG

TrEMBL top hitse value%identityAlignment
A0A5A7TL70 Reverse transcriptase9.4e-9851.85Show/hide
Query:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLRE------------------
        M ESRR  TG+MSWDEFKK FFD            NEFL+L QGSMTV +YEKKYT+LSKYA  VIEDE++RC RFEEGL+E                  
Subjt:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLRE------------------

Query:  --EIRNFKSQHS--------------GSSVSKSGSGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGSSKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTT
           +R  KS +                SS+ ++  G   QRSSGSS  I STGGS   RSD VV  S KS+VCYNC QPGHYRR+CPHLIP GNTI KTT
Subjt:  --EIRNFKSQHS--------------GSSVSKSGSGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGSSKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTT

Query:  SQTYA---HVFVDPGATYSFVSLRFAIGVDKMLESPTEELFIST----------LLGDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLS
        S T +         G   S    +  +G  +    P  ++F  T          ++GDSFI NSV+R C V IDGE + VDLI LNI+ F+VILGMDFLS
Subjt:  SQTYA---HVFVDPGATYSFVSLRFAIGVDKMLESPTEELFIST----------LLGDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLS

Query:  NNYASLDCHQKDVVFKCPGKNEIIFRGDRKINPTCVISALKSSKLLRKGCTTYLAHVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLV
        N+YASL+CHQK++VFK PG                            KGCT YLA+V+D QV  LKL DI VVREF DVFP+ELSGLPP+REIEFSI LV
Subjt:  NNYASLDCHQKDVVFKCPGKNEIIFRGDRKINPTCVISALKSSKLLRKGCTTYLAHVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLV

Query:  PRMTPISQAPYIMAPIELKEFKTQLQELVDKG
        P   PISQAPYIMA +EL+E K+Q+QELVDKG
Subjt:  PRMTPISQAPYIMAPIELKEFKTQLQELVDKG

A0A5A7UZM6 Gag protease polyprotein-like protein1.9e-12755.72Show/hide
Query:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLREEIR---------------
        M ESRR  TG++SW+EFKK FFD            NEFL+LTQGSMT+A+YEKKYT+LS YA  VIEDE++RC RFEEGLREEIR               
Subjt:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLREEIR---------------

Query:  ----------------------------------------------------NFKSQHSGSSVSKSGSGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGS
                                                            NFKSQ++GSS SKSGS G  QRSSGSS  I STGGS   RSD VV  S
Subjt:  ----------------------------------------------------NFKSQHSGSSVSKSGSGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGS

Query:  SKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTTSQTYAH-----------------------------VFVDPGATYSFVSLRFAIGVDKMLESPTEELF
        SKS+VCYNCGQPGHYRR+CPHLIP GNTI KTTSQT +                              VF       +       +G+DK LES TEEL 
Subjt:  SKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTTSQTYAH-----------------------------VFVDPGATYSFVSLRFAIGVDKMLESPTEELF

Query:  ISTLLGDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLSNNYASLDCHQKDVVFKCPGKNEIIFRGDRKINPTCVISALKSSKLLRKGCT
        IST +GDSFI NSV+R C + IDGE + VDL PLNI+ F+VILGMDFLSN+YASL+CHQK++VFK PG +EI+FRGDRKI  TCVISALK+SKLLRKGCT
Subjt:  ISTLLGDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLSNNYASLDCHQKDVVFKCPGKNEIIFRGDRKINPTCVISALKSSKLLRKGCT

Query:  TYLAHVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLVPRMTPISQAPYIMAPIELKEFKTQLQELVDKG
         YL +V+D QV  LKL DIPVVREF DVFPEELS LPP+REIEFSI LVP  TPISQAPY MAP+EL+E K+QLQELVD G
Subjt:  TYLAHVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLVPRMTPISQAPYIMAPIELKEFKTQLQELVDKG

A0A5D3BB91 Reverse transcriptase6.5e-9948.64Show/hide
Query:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLREEIR---------------
        M ESRR  TG+MSWDEFKK FFD            NEF++LTQG+MTVA+YEKKYT+LSKYA  VI DE +RC RFEEGLREEIR               
Subjt:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLREEIR---------------

Query:  ----------------------------------------------------NFKSQHSGSSVSKSGSGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGS
                                                            +FKSQ+SGSS SKS SGG  QRSS SS +I STGGS   RS+ VV  S
Subjt:  ----------------------------------------------------NFKSQHSGSSVSKSGSGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGS

Query:  SKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTTSQTYAHVFVDPGATYSFVS---------------LRFAIGVDKMLESPTEELFISTLL---------
         KS+VCYNC Q GHYRR+CPHLIP  NTI KTTSQT        G +    S                 FA+   +  ++P      S++          
Subjt:  SKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTTSQTYAHVFVDPGATYSFVS---------------LRFAIGVDKMLESPTEELFISTLL---------

Query:  -GDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLSNNYASLDCHQKDVVFKCPGKNEIIFRGDRKINPTCVISALKSSKLLRKGCTTYLA
         GDSFI NSV+R C + IDGE + VDLIPLNI+ F+VILGMDFLSN+YASL+CHQK++VFK P K+EIIFRG+RKI PT VISALK+SKLLRKGCT YLA
Subjt:  -GDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLSNNYASLDCHQKDVVFKCPGKNEIIFRGDRKINPTCVISALKSSKLLRKGCTTYLA

Query:  HVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLVPRMTPISQAPYIMAPIELKEFKTQLQELVDKG
        HVMD Q+  L L DIP                            VPR TPISQAPY M  +EL+E K+QLQELVDKG
Subjt:  HVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLVPRMTPISQAPYIMAPIELKEFKTQLQELVDKG

A0A5D3DI38 Reverse transcriptase7.9e-9751.62Show/hide
Query:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLRE------------------
        M ESRR  T +MSWDEFKK FFD            NEFL+L QGSMTV +YEKKYT+LSKYA  VIEDE++RC RFEEGL+E                  
Subjt:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLRE------------------

Query:  --EIRNFKSQHS--------------GSSVSKSGSGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGSSKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTT
           +R  KS +                SS+ ++  G   QRSSGSS  I STGGS   RSD VV  S KS+VCYNC QPGHYRR+CPHLIP GNTI KTT
Subjt:  --EIRNFKSQHS--------------GSSVSKSGSGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGSSKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTT

Query:  SQTYA---HVFVDPGATYSFVSLRFAIGVDKMLESPTEELFIST----------LLGDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLS
        S T +         G   S    +  +G  +    P  ++F  T          ++GDSFI NSV+R C V IDGE + VDLI LNI+ F+VILGMDFLS
Subjt:  SQTYA---HVFVDPGATYSFVSLRFAIGVDKMLESPTEELFIST----------LLGDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLS

Query:  NNYASLDCHQKDVVFKCPGKNEIIFRGDRKINPTCVISALKSSKLLRKGCTTYLAHVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLV
        N+YASL+CHQK++VFK PG                            KGCT YLA+V+D QV  LKL DI VVREF DVFP+ELSGLPP+REIEFSI LV
Subjt:  NNYASLDCHQKDVVFKCPGKNEIIFRGDRKINPTCVISALKSSKLLRKGCTTYLAHVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLV

Query:  PRMTPISQAPYIMAPIELKEFKTQLQELVDKG
        P   PISQAPYIMA +EL+E K+Q+QELVDKG
Subjt:  PRMTPISQAPYIMAPIELKEFKTQLQELVDKG

A0A5D3DS52 Reverse transcriptase6.9e-12561.99Show/hide
Query:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLREEIRNFKSQHSGSSVSKSG
        M ESR+  T ++SWDEFK  FFD            NEFL+LTQGSMT+A+YEKKYT+LSKYA  VIEDE++RC   EEGL     NFKSQ+SGSS SKSG
Subjt:  MIESRRGATGEMSWDEFKKTFFD------------NEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLREEIRNFKSQHSGSSVSKSG

Query:  SGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGSSKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTTSQTYAHVF----------------------VDPG
         GGR QRSSGS+  I ST GS   RSD V+  S KS+VCYNCGQ GHYRR+CPHLIP GNTI KTTSQT +                            G
Subjt:  SGGRIQRSSGSSRSIYSTGGSQAVRSDGVVVGSSKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTTSQTYAHVF----------------------VDPG

Query:  ATYSFVSLRFA-------IGVDKMLESPTEELFISTLLGDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLSNNYASLDCHQKDVVFKCP
           +      A       IGVDK LES TEEL ISTL+GDSFI NSV+R C + ID E + VDLIPLNI+ F+VILGMDFLSN+YASL+CH+K++VFK P
Subjt:  ATYSFVSLRFA-------IGVDKMLESPTEELFISTLLGDSFIANSVFRDCVVQIDGEAIAVDLIPLNIRLFNVILGMDFLSNNYASLDCHQKDVVFKCP

Query:  GKNEIIFRGDRKINPTCVISALKSSKLLRKGCTTYLAHVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLVPRMTPISQAPYIMAPIEL
         K+EIIF GDRKI PT VIS LK+SKLLRKGCT YLA+VMD Q+  LKL DIPVVREF DVFPEELSG+ P+REIEFSI LV  M PISQA Y MAP+EL
Subjt:  GKNEIIFRGDRKINPTCVISALKSSKLLRKGCTTYLAHVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPPNREIEFSIYLVPRMTPISQAPYIMAPIEL

Query:  KEFKTQLQELVDK
        +E K+QLQELVDK
Subjt:  KEFKTQLQELVDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGAAAGTAGACGAGGAGCTACTGGTGAGATGAGTTGGGATGAGTTCAAAAAGACATTTTTTGATAATGAGTTCTTAAAGCTCACTCAAGGCTCAATGACGGTCGC
TAAATATGAGAAGAAGTATACAAAGTTATCTAAGTACGCCATCAATGTGATTGAAGATGAGATTGATAGATGTAATAGATTTGAAGAGGGATTAAGAGAGGAAATTCGAA
ATTTTAAGTCTCAACATAGTGGTTCTTCTGTTTCTAAATCTGGATCAGGTGGAAGGATTCAGAGATCGAGTGGTTCTAGCCGTTCTATATACTCTACAGGAGGTTCTCAA
GCTGTACGATCCGATGGTGTGGTTGTAGGGTCTAGCAAGAGTAATGTATGTTATAACTGTGGTCAACCAGGTCATTATCGTAGAAATTGTCCCCATTTGATACCAGAAGG
TAATACTATTAAAAAAACTACTTCTCAGACATATGCACATGTTTTTGTGGATCCTGGTGCAACATATTCATTTGTTTCTTTGAGGTTTGCTATCGGGGTCGATAAAATGT
TAGAGAGTCCGACCGAGGAATTGTTTATAAGTACACTTTTGGGTGATAGTTTCATAGCTAATAGTGTGTTTCGAGACTGTGTGGTACAAATAGATGGTGAAGCGATAGCA
GTGGATCTGATTCCCTTAAATATACGGTTGTTCAATGTTATTTTGGGAATGGACTTTTTGTCTAATAACTATGCTTCTCTAGATTGTCATCAGAAAGATGTTGTTTTTAA
ATGTCCGGGGAAGAATGAAATTATTTTTCGGGGTGATAGAAAAATAAATCCCACATGTGTGATCTCTGCTTTAAAATCGAGTAAATTGTTGAGGAAGGGTTGTACGACAT
ACCTAGCACATGTGATGGATGCCCAGGTTGGTAATCTGAAGCTTGGTGATATACCTGTGGTAAGAGAATTTCTAGATGTTTTTCCTGAAGAATTATCGGGGTTACCCCCA
AATAGAGAGATTGAGTTCTCAATTTATTTGGTGCCTAGAATGACACCCATTTCACAAGCTCCCTATATAATGGCACCGATAGAGTTGAAAGAGTTCAAGACTCAGTTGCA
AGAATTGGTGGATAAGGGTTTATTCGACAAAGTGCCTCTCCGTGGGGTGCACCAGTGTTGTTTGTCAAAAAGAAGGATGGTACGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAGAAAGTAGACGAGGAGCTACTGGTGAGATGAGTTGGGATGAGTTCAAAAAGACATTTTTTGATAATGAGTTCTTAAAGCTCACTCAAGGCTCAATGACGGTCGC
TAAATATGAGAAGAAGTATACAAAGTTATCTAAGTACGCCATCAATGTGATTGAAGATGAGATTGATAGATGTAATAGATTTGAAGAGGGATTAAGAGAGGAAATTCGAA
ATTTTAAGTCTCAACATAGTGGTTCTTCTGTTTCTAAATCTGGATCAGGTGGAAGGATTCAGAGATCGAGTGGTTCTAGCCGTTCTATATACTCTACAGGAGGTTCTCAA
GCTGTACGATCCGATGGTGTGGTTGTAGGGTCTAGCAAGAGTAATGTATGTTATAACTGTGGTCAACCAGGTCATTATCGTAGAAATTGTCCCCATTTGATACCAGAAGG
TAATACTATTAAAAAAACTACTTCTCAGACATATGCACATGTTTTTGTGGATCCTGGTGCAACATATTCATTTGTTTCTTTGAGGTTTGCTATCGGGGTCGATAAAATGT
TAGAGAGTCCGACCGAGGAATTGTTTATAAGTACACTTTTGGGTGATAGTTTCATAGCTAATAGTGTGTTTCGAGACTGTGTGGTACAAATAGATGGTGAAGCGATAGCA
GTGGATCTGATTCCCTTAAATATACGGTTGTTCAATGTTATTTTGGGAATGGACTTTTTGTCTAATAACTATGCTTCTCTAGATTGTCATCAGAAAGATGTTGTTTTTAA
ATGTCCGGGGAAGAATGAAATTATTTTTCGGGGTGATAGAAAAATAAATCCCACATGTGTGATCTCTGCTTTAAAATCGAGTAAATTGTTGAGGAAGGGTTGTACGACAT
ACCTAGCACATGTGATGGATGCCCAGGTTGGTAATCTGAAGCTTGGTGATATACCTGTGGTAAGAGAATTTCTAGATGTTTTTCCTGAAGAATTATCGGGGTTACCCCCA
AATAGAGAGATTGAGTTCTCAATTTATTTGGTGCCTAGAATGACACCCATTTCACAAGCTCCCTATATAATGGCACCGATAGAGTTGAAAGAGTTCAAGACTCAGTTGCA
AGAATTGGTGGATAAGGGTTTATTCGACAAAGTGCCTCTCCGTGGGGTGCACCAGTGTTGTTTGTCAAAAAGAAGGATGGTACGTTAA
Protein sequenceShow/hide protein sequence
MIESRRGATGEMSWDEFKKTFFDNEFLKLTQGSMTVAKYEKKYTKLSKYAINVIEDEIDRCNRFEEGLREEIRNFKSQHSGSSVSKSGSGGRIQRSSGSSRSIYSTGGSQ
AVRSDGVVVGSSKSNVCYNCGQPGHYRRNCPHLIPEGNTIKKTTSQTYAHVFVDPGATYSFVSLRFAIGVDKMLESPTEELFISTLLGDSFIANSVFRDCVVQIDGEAIA
VDLIPLNIRLFNVILGMDFLSNNYASLDCHQKDVVFKCPGKNEIIFRGDRKINPTCVISALKSSKLLRKGCTTYLAHVMDAQVGNLKLGDIPVVREFLDVFPEELSGLPP
NREIEFSIYLVPRMTPISQAPYIMAPIELKEFKTQLQELVDKGLFDKVPLRGVHQCCLSKRRMVR