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PI0029108 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0029108
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGATA zinc finger domain-containing protein 10-like isoform X2
Genome locationchr07:5281894..5283134
RNA-Seq ExpressionPI0029108
SyntenyPI0029108
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.5e-4080.95Show/hide
Query:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS
        V DDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYH VEEVPP T    QTGYGSPM MMPTFGAGY DSEVGTGYYD+G+ PS
Subjt:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS

Query:  SSYMD
        S YMD
Subjt:  SSYMD

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.7e-3879.05Show/hide
Query:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS
        V DD QQ LDICNNNERYMEEIH MYD+PIVPPPV+RG VRVEE ELD+VYH VEEVP  T    QTGYGSPM MMPTF AGYCD EVG GYYD+GVGPS
Subjt:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS

Query:  SSYMD
        SSY+D
Subjt:  SSYMD

KAA0064245.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.4e-3880Show/hide
Query:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS
        V DDPQQVLDICNNNERYMEEIH MYD+PIVP P++RGR+RVEE ELDEVYH VEEVPP T    QTGYGS M MMPTFGA YCDSEVG GYYD+GV  S
Subjt:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS

Query:  SSYMD
        SSYMD
Subjt:  SSYMD

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.5e-4080.95Show/hide
Query:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS
        V DDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYH VEEVPP T    QTGYGSPM MMPTFGAGY DSEVGTGYYD+G+ PS
Subjt:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS

Query:  SSYMD
        S YMD
Subjt:  SSYMD

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.8e-3879.05Show/hide
Query:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS
        V +DPQQVLDICNNNERYME+IH +YD+PIVPPPV+R R RVEE ELDEVYH VEEVPP T    QTGYGSPM MMPTFGAGYCDSEV  GYYD+ VGP 
Subjt:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS

Query:  SSYMD
        SSYMD
Subjt:  SSYMD

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.7e-4080.95Show/hide
Query:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS
        V DDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYH VEEVPP T    QTGYGSPM MMPTFGAGY DSEVGTGYYD+G+ PS
Subjt:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS

Query:  SSYMD
        S YMD
Subjt:  SSYMD

A0A5A7VEC1 GATA zinc finger domain-containing protein 10-like isoform X26.5e-3980Show/hide
Query:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS
        V DDPQQVLDICNNNERYMEEIH MYD+PIVP P++RGR+RVEE ELDEVYH VEEVPP T    QTGYGS M MMPTFGA YCDSEVG GYYD+GV  S
Subjt:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS

Query:  SSYMD
        SSYMD
Subjt:  SSYMD

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X23.2e-3879.05Show/hide
Query:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS
        V DD QQ LDICNNNERYMEEIH MYD+PIVPPPV+RG VRVEE ELD+VYH VEEVP  T    QTGYGSPM MMPTF AGYCD EVG GYYD+GVGPS
Subjt:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS

Query:  SSYMD
        SSY+D
Subjt:  SSYMD

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.7e-4080.95Show/hide
Query:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS
        V DDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYH VEEVPP T    QTGYGSPM MMPTFGAGY DSEVGTGYYD+G+ PS
Subjt:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS

Query:  SSYMD
        S YMD
Subjt:  SSYMD

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein8.5e-3979.05Show/hide
Query:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS
        V +DPQQVLDICNNNERYME+IH +YD+PIVPPPV+R R RVEE ELDEVYH VEEVPP T    QTGYGSPM MMPTFGAGYCDSEV  GYYD+ VGP 
Subjt:  VHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVT----QTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPS

Query:  SSYMD
        SSYMD
Subjt:  SSYMD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAACGATCATCAACTACCTGGATGAGCACACGGTTCACGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATAT
GTACGATGTACCTATTGTACCTCCACCAGTTAACAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAAAGTAGAAGAAGTACCTCCAGTGACAC
AAACTGGTTATGGTAGCCCGATGATGATGATGCCAACATTTGGAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATTATGACTCAGGGGTCGGTCCATCGTCTTCA
TACATGGATTCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGGCCGCCGAGAATATAATGAATATCAGTACTATGAAGCGCCTACAGACGTCCCAGAT
CCACAAGAGTACCAACAAGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAACGATCATCAACTACCTGGATGAGCACACGGTTCACGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATAT
GTACGATGTACCTATTGTACCTCCACCAGTTAACAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAAAGTAGAAGAAGTACCTCCAGTGACAC
AAACTGGTTATGGTAGCCCGATGATGATGATGCCAACATTTGGAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATTATGACTCAGGGGTCGGTCCATCGTCTTCA
TACATGGATTCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGGCCGCCGAGAATATAATGAATATCAGTACTATGAAGCGCCTACAGACGTCCCAGAT
CCACAAGAGTACCAACAAGAACTAG
Protein sequenceShow/hide protein sequence
MQTIINYLDEHTVHDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHKVEEVPPVTQTGYGSPMMMMPTFGAGYCDSEVGTGYYDSGVGPSSS
YMDSDHQLLTCMDMDTDAAAENIMNISTMKRLQTSQIHKSTNKN