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PI0029121 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0029121
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr05:17174525..17176237
RNA-Seq ExpressionPI0029121
SyntenyPI0029121
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]6.7e-3838.91Show/hide
Query:  ERNLDVIVEELEDELEAMIPIDQ---EPPPTKPREVAGPS----KGKKKSGHSGPEERPSGGEAITKIPSINSLIKVEKGSFPFNGPLLDFLFVPIHAFG
        E+  D   +E E ELE + P++    E  P K R + G      + K K+     E + S  E +     +     +EKG FPF G L  FL  PI A  
Subjt:  ERNLDVIVEELEDELEAMIPIDQ---EPPPTKPREVAGPS----KGKKKSGHSGPEERPSGGEAITKIPSINSLIKVEKGSFPFNGPLLDFLFVPIHAFG

Query:  WKKFFKGHTKLRLGVVEKFYAAKLNANEFSVEISGKTVSFNAEAINDLYELPNDAEMSGQEYVV--GPTRRMAREALDVIAWPGAAWEVTPTGKYQLYPH
        WK+FF+G T +R  V+  FY   +N       + GK V+F  + +N LY L      +  EY +   P+    + AL+ +AWPG  W++TP  KYQL+PH
Subjt:  WKKFFKGHTKLRLGVVEKFYAAKLNANEFSVEISGKTVSFNAEAINDLYELPNDAEMSGQEYVV--GPTRRMAREALDVIAWPGAAWEVTPTGKYQLYPH

Query:  QLTTEASVWLFFIKKKIFPTRHDNTINLESAMLLYCIMTKKRVNLGDLIATSILPWM
         L T ASVWL FIKK + PTRHDNTI+LE  MLLYCIM +  +N+ ++I   I  W+
Subjt:  QLTTEASVWLFFIKKKIFPTRHDNTINLESAMLLYCIMTKKRVNLGDLIATSILPWM

KAA0049609.1 transposase [Cucumis melo var. makuwa]1.4e-3247.85Show/hide
Query:  ISGKTVSFNAEAINDLYELPND-AEMSGQEYVVGPTRRMAREALDVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLESAML
        +  + V F  E IN+LY+LPND     GQ  +V      A++ + +I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HD+TI  E A++
Subjt:  ISGKTVSFNAEAINDLYELPND-AEMSGQEYVVGPTRRMAREALDVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLESAML

Query:  LYCIMTKKRVNLGDLIATSILPWMRAPKGAMPFPSTIEALCVKVV-PFLCTMNSISIPGGLCN
        LYCI  KK  NLG ++  + L WMR PK A PFP+T++ LC+K +      +  I + GG CN
Subjt:  LYCIMTKKRVNLGDLIATSILPWMRAPKGAMPFPSTIEALCVKVV-PFLCTMNSISIPGGLCN

KAA0054837.1 hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa]1.1e-3234.52Show/hide
Query:  EDELEAMIPIDQEPPPTKPREVAGPSKG-----KKKSGHSGPEERPSGGEAITKIPSINSLIKVEKGSFPFNGPLLDFLFVPIHAFGWKKFFKGHTKLRL
        E++   + P+++E    +PR+     +G     + K   +  EE     E             VEKG F F   L  FL  PI A GW++F +G   +R 
Subjt:  EDELEAMIPIDQEPPPTKPREVAGPSKG-----KKKSGHSGPEERPSGGEAITKIPSINSLIKVEKGSFPFNGPLLDFLFVPIHAFGWKKFFKGHTKLRL

Query:  GVVEKFYAAKLNANEFSVEISGKTVSFNAEAINDLYELPNDAEMSGQEYVVGPTRRMAREALDVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKK
        GVV+ FY  K++  +    +  +               P+D +M              +EAL+ +AW    W+VT   KY+L+ H LTTEASVWL FIKK
Subjt:  GVVEKFYAAKLNANEFSVEISGKTVSFNAEAINDLYELPNDAEMSGQEYVVGPTRRMAREALDVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKK

Query:  KIFPTRHDNTINLESAMLLYCIMTKKRVNLGDLIATSILPWMRAPKGAMPFPSTIEALCVKVVPFLCTMNSIS-IPGGLCN
        K+ PTRHDNTI+ E  MLLYCIM +  V++ ++I   I  W++ P+GA PFP  IE LC++    L     I+ +  G+CN
Subjt:  KIFPTRHDNTINLESAMLLYCIMTKKRVNLGDLIATSILPWMRAPKGAMPFPSTIEALCVKVVPFLCTMNSIS-IPGGLCN

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]4.0e-4351.11Show/hide
Query:  KLRLGVVEKFYAAKLNANEFSVEISGKTVSFNAEAINDLYELPNDAEMSGQEYVVGPTRRMAREALDVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWL
        K+R+ VV KFY  K N ++  + I  +   FN E IN+LY  PNDAE  GQE V   T+ +A+EAL V+AWPG   EV P   +YQLYPH LTT+A+VW+
Subjt:  KLRLGVVEKFYAAKLNANEFSVEISGKTVSFNAEAINDLYELPNDAEMSGQEYVVGPTRRMAREALDVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWL

Query:  FFIKKKIFPTRHDNTINLESAMLLYCIMTKKRVNLGDLIATSILPWMRAPKGAMPFPSTIEALCVKVVPFLCTMNSISIP
        FF K KIFPT +D+TI+++  ++LYCIM KK +NL ++I  +IL WM  PK AMPFPS +E LC+K +P L      +IP
Subjt:  FFIKKKIFPTRHDNTINLESAMLLYCIMTKKRVNLGDLIATSILPWMRAPKGAMPFPSTIEALCVKVVPFLCTMNSISIP

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]1.4e-3247.85Show/hide
Query:  ISGKTVSFNAEAINDLYELPND-AEMSGQEYVVGPTRRMAREALDVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLESAML
        +  + V F  E IN+LY+LPND     GQ  +V      A++ + +I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HD+TI  E A++
Subjt:  ISGKTVSFNAEAINDLYELPND-AEMSGQEYVVGPTRRMAREALDVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLESAML

Query:  LYCIMTKKRVNLGDLIATSILPWMRAPKGAMPFPSTIEALCVKVV-PFLCTMNSISIPGGLCN
        LYCI  KK  NLG ++  + L WMR PK A PFP+T++ LC+K +      +  I + GG CN
Subjt:  LYCIMTKKRVNLGDLIATSILPWMRAPKGAMPFPSTIEALCVKVV-PFLCTMNSISIPGGLCN

TrEMBL top hitse value%identityAlignment
A0A5A7TZE0 Protein MNN4-like3.2e-3838.91Show/hide
Query:  ERNLDVIVEELEDELEAMIPIDQ---EPPPTKPREVAGPS----KGKKKSGHSGPEERPSGGEAITKIPSINSLIKVEKGSFPFNGPLLDFLFVPIHAFG
        E+  D   +E E ELE + P++    E  P K R + G      + K K+     E + S  E +     +     +EKG FPF G L  FL  PI A  
Subjt:  ERNLDVIVEELEDELEAMIPIDQ---EPPPTKPREVAGPS----KGKKKSGHSGPEERPSGGEAITKIPSINSLIKVEKGSFPFNGPLLDFLFVPIHAFG

Query:  WKKFFKGHTKLRLGVVEKFYAAKLNANEFSVEISGKTVSFNAEAINDLYELPNDAEMSGQEYVV--GPTRRMAREALDVIAWPGAAWEVTPTGKYQLYPH
        WK+FF+G T +R  V+  FY   +N       + GK V+F  + +N LY L      +  EY +   P+    + AL+ +AWPG  W++TP  KYQL+PH
Subjt:  WKKFFKGHTKLRLGVVEKFYAAKLNANEFSVEISGKTVSFNAEAINDLYELPNDAEMSGQEYVV--GPTRRMAREALDVIAWPGAAWEVTPTGKYQLYPH

Query:  QLTTEASVWLFFIKKKIFPTRHDNTINLESAMLLYCIMTKKRVNLGDLIATSILPWM
         L T ASVWL FIKK + PTRHDNTI+LE  MLLYCIM +  +N+ ++I   I  W+
Subjt:  QLTTEASVWLFFIKKKIFPTRHDNTINLESAMLLYCIMTKKRVNLGDLIATSILPWM

A0A5A7U806 Transposase7.0e-3347.85Show/hide
Query:  ISGKTVSFNAEAINDLYELPND-AEMSGQEYVVGPTRRMAREALDVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLESAML
        +  + V F  E IN+LY+LPND     GQ  +V      A++ + +I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HD+TI  E A++
Subjt:  ISGKTVSFNAEAINDLYELPND-AEMSGQEYVVGPTRRMAREALDVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLESAML

Query:  LYCIMTKKRVNLGDLIATSILPWMRAPKGAMPFPSTIEALCVKVV-PFLCTMNSISIPGGLCN
        LYCI  KK  NLG ++  + L WMR PK A PFP+T++ LC+K +      +  I + GG CN
Subjt:  LYCIMTKKRVNLGDLIATSILPWMRAPKGAMPFPSTIEALCVKVV-PFLCTMNSISIPGGLCN

A0A5A7V6M5 Gag/pol protein2.0e-4351.11Show/hide
Query:  KLRLGVVEKFYAAKLNANEFSVEISGKTVSFNAEAINDLYELPNDAEMSGQEYVVGPTRRMAREALDVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWL
        K+R+ VV KFY  K N ++  + I  +   FN E IN+LY  PNDAE  GQE V   T+ +A+EAL V+AWPG   EV P   +YQLYPH LTT+A+VW+
Subjt:  KLRLGVVEKFYAAKLNANEFSVEISGKTVSFNAEAINDLYELPNDAEMSGQEYVVGPTRRMAREALDVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWL

Query:  FFIKKKIFPTRHDNTINLESAMLLYCIMTKKRVNLGDLIATSILPWMRAPKGAMPFPSTIEALCVKVVPFLCTMNSISIP
        FF K KIFPT +D+TI+++  ++LYCIM KK +NL ++I  +IL WM  PK AMPFPS +E LC+K +P L      +IP
Subjt:  FFIKKKIFPTRHDNTINLESAMLLYCIMTKKRVNLGDLIATSILPWMRAPKGAMPFPSTIEALCVKVVPFLCTMNSISIP

A0A5D3CVL7 Uncharacterized protein7.0e-3347.85Show/hide
Query:  ISGKTVSFNAEAINDLYELPND-AEMSGQEYVVGPTRRMAREALDVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLESAML
        +  + V F  E IN+LY+LPND     GQ  +V      A++ + +I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HD+TI  E A++
Subjt:  ISGKTVSFNAEAINDLYELPND-AEMSGQEYVVGPTRRMAREALDVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDNTINLESAML

Query:  LYCIMTKKRVNLGDLIATSILPWMRAPKGAMPFPSTIEALCVKVV-PFLCTMNSISIPGGLCN
        LYCI  KK  NLG ++  + L WMR PK A PFP+T++ LC+K +      +  I + GG CN
Subjt:  LYCIMTKKRVNLGDLIATSILPWMRAPKGAMPFPSTIEALCVKVV-PFLCTMNSISIPGGLCN

A0A5D3DVQ6 Uncharacterized protein5.3e-3334.52Show/hide
Query:  EDELEAMIPIDQEPPPTKPREVAGPSKG-----KKKSGHSGPEERPSGGEAITKIPSINSLIKVEKGSFPFNGPLLDFLFVPIHAFGWKKFFKGHTKLRL
        E++   + P+++E    +PR+     +G     + K   +  EE     E             VEKG F F   L  FL  PI A GW++F +G   +R 
Subjt:  EDELEAMIPIDQEPPPTKPREVAGPSKG-----KKKSGHSGPEERPSGGEAITKIPSINSLIKVEKGSFPFNGPLLDFLFVPIHAFGWKKFFKGHTKLRL

Query:  GVVEKFYAAKLNANEFSVEISGKTVSFNAEAINDLYELPNDAEMSGQEYVVGPTRRMAREALDVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKK
        GVV+ FY  K++  +    +  +               P+D +M              +EAL+ +AW    W+VT   KY+L+ H LTTEASVWL FIKK
Subjt:  GVVEKFYAAKLNANEFSVEISGKTVSFNAEAINDLYELPNDAEMSGQEYVVGPTRRMAREALDVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKK

Query:  KIFPTRHDNTINLESAMLLYCIMTKKRVNLGDLIATSILPWMRAPKGAMPFPSTIEALCVKVVPFLCTMNSIS-IPGGLCN
        K+ PTRHDNTI+ E  MLLYCIM +  V++ ++I   I  W++ P+GA PFP  IE LC++    L     I+ +  G+CN
Subjt:  KIFPTRHDNTINLESAMLLYCIMTKKRVNLGDLIATSILPWMRAPKGAMPFPSTIEALCVKVVPFLCTMNSIS-IPGGLCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCGTTGGAGCCTGAGAGAAACCTCGATGTTATTGTTGAAGAACTCGAGGATGAGCTGGAGGCGATGATCCCAATTGATCAAGAGCCACCGCCAACAAAACCAAG
GGAGGTCGCCGGACCGTCCAAAGGAAAGAAGAAGAGTGGGCATTCTGGACCTGAGGAGCGCCCATCAGGCGGCGAAGCCATTACAAAAATACCCTCAATCAACTCTCTCA
TAAAGGTTGAGAAAGGGTCGTTTCCTTTTAATGGCCCACTCCTAGACTTCCTCTTCGTGCCTATCCATGCGTTTGGATGGAAGAAATTTTTCAAAGGGCACACCAAGTTG
AGATTGGGGGTGGTGGAAAAGTTCTATGCGGCTAAACTCAATGCTAATGAGTTTAGCGTGGAAATCAGTGGCAAGACAGTAAGCTTCAACGCAGAGGCCATCAACGATTT
ATACGAGCTGCCCAACGATGCTGAAATGTCTGGGCAAGAATATGTGGTTGGTCCCACAAGAAGAATGGCCCGTGAAGCGTTGGACGTAATCGCCTGGCCTGGGGCCGCAT
GGGAAGTAACACCGACAGGGAAGTATCAACTCTATCCACACCAACTAACCACAGAGGCGAGCGTGTGGCTTTTTTTCATTAAAAAGAAGATCTTCCCTACGCGCCATGAT
AACACCATTAACCTAGAGTCAGCTATGCTACTCTATTGTATAATGACGAAGAAGCGCGTCAACCTTGGCGATCTGATAGCTACATCCATTCTGCCCTGGATGCGAGCTCC
TAAGGGCGCCATGCCCTTCCCATCTACAATTGAAGCCCTATGCGTTAAGGTTGTACCGTTTCTCTGCACCATGAACTCAATCTCAATTCCAGGCGGTTTGTGTAACCAAA
TGGCTTTAAATCGCATGCTAACTTTCCATGGCCACAAAGAAATGGAAAGGCGATCAAAGACATTAGGCGTCACAACTGAAGGTGTGGCCCAAGCAGAGCGCAAGCGGAAG
TTCCCAGCCGCTGCATTAAACCCTCAACCGAAAATTTAA
mRNA sequenceShow/hide mRNA sequence
GGGAAACTCATCGGAAACCTCATCCTTCATCCCAAACTTTATCAGAAAGATGGCCGGATCTTCAAGCAAGCATTAAGATCAGATCAGAGTTCGTTCTGATGGCCCTAAAT
CAGAGCGACCTACATTGGGAGGAAGTGGCGAACAAGAAACGCCACAGTACACCCACCTGAAGCATGGGAAAGGAAAGGTGTTACTTAAGCCTCTGCCAGAAGCATCTGAG
CTTTTCGAGGAAGTGGAGGTTGGCAATCTGGATAAGGATGCCGTTCTTGATTTTCTCAACGAGCGACTAAGAAAGCGAAAAGAAGCACACCTGAAGAGGACAAAAGAAGC
TTATCACAGGAAGGACGAACGCGAGCGATTGAGATTTGAGGAACGTCGAAAGGCGGGGAGTACGCTAGAAATACGCTCACTGCCTAACGAGGTTGCAGAACTTCACAAGA
AAATATCTGACAAGCTCGTTCAAGTCTCGTTCGCCAAAACGAGAAAAACAATAGAGGCGGTTAAGTCCGCCTTGAAAAAGAAGGAAGAAAAAAAGAGAATGCTCGCGGAC
CTAAGCGAGTAAGTGGCGGAGCTCCCCCCGAAGATGAAAGCGTTGGAGCCTGAGAGAAACCTCGATGTTATTGTTGAAGAACTCGAGGATGAGCTGGAGGCGATGATCCC
AATTGATCAAGAGCCACCGCCAACAAAACCAAGGGAGGTCGCCGGACCGTCCAAAGGAAAGAAGAAGAGTGGGCATTCTGGACCTGAGGAGCGCCCATCAGGCGGCGAAG
CCATTACAAAAATACCCTCAATCAACTCTCTCATAAAGGTTGAGAAAGGGTCGTTTCCTTTTAATGGCCCACTCCTAGACTTCCTCTTCGTGCCTATCCATGCGTTTGGA
TGGAAGAAATTTTTCAAAGGGCACACCAAGTTGAGATTGGGGGTGGTGGAAAAGTTCTATGCGGCTAAACTCAATGCTAATGAGTTTAGCGTGGAAATCAGTGGCAAGAC
AGTAAGCTTCAACGCAGAGGCCATCAACGATTTATACGAGCTGCCCAACGATGCTGAAATGTCTGGGCAAGAATATGTGGTTGGTCCCACAAGAAGAATGGCCCGTGAAG
CGTTGGACGTAATCGCCTGGCCTGGGGCCGCATGGGAAGTAACACCGACAGGGAAGTATCAACTCTATCCACACCAACTAACCACAGAGGCGAGCGTGTGGCTTTTTTTC
ATTAAAAAGAAGATCTTCCCTACGCGCCATGATAACACCATTAACCTAGAGTCAGCTATGCTACTCTATTGTATAATGACGAAGAAGCGCGTCAACCTTGGCGATCTGAT
AGCTACATCCATTCTGCCCTGGATGCGAGCTCCTAAGGGCGCCATGCCCTTCCCATCTACAATTGAAGCCCTATGCGTTAAGGTTGTACCGTTTCTCTGCACCATGAACT
CAATCTCAATTCCAGGCGGTTTGTGTAACCAAATGGCTTTAAATCGCATGCTAACTTTCCATGGCCACAAAGAAATGGAAAGGCGATCAAAGACATTAGGCGTCACAACT
GAAGGTGTGGCCCAAGCAGAGCGCAAGCGGAAGTTCCCAGCCGCTGCATTAAACCCTCAACCGAAAATTTAAAAACCAAGGGTTGATGTGGCGAAGCAACCCCCACCACT
AAAGATTATCCACCCCTCCTCCCGCCCAATCAAAAGAACCCCCTCCAAAATCCAAAAAGATCC
Protein sequenceShow/hide protein sequence
MKALEPERNLDVIVEELEDELEAMIPIDQEPPPTKPREVAGPSKGKKKSGHSGPEERPSGGEAITKIPSINSLIKVEKGSFPFNGPLLDFLFVPIHAFGWKKFFKGHTKL
RLGVVEKFYAAKLNANEFSVEISGKTVSFNAEAINDLYELPNDAEMSGQEYVVGPTRRMAREALDVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHD
NTINLESAMLLYCIMTKKRVNLGDLIATSILPWMRAPKGAMPFPSTIEALCVKVVPFLCTMNSISIPGGLCNQMALNRMLTFHGHKEMERRSKTLGVTTEGVAQAERKRK
FPAAALNPQPKI