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PI0029125 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0029125
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr07:13754911..13757365
RNA-Seq ExpressionPI0029125
SyntenyPI0029125
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]1.5e-5765.76Show/hide
Query:  MAPLLGS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQ
        M  LL S   G  +KV KCGVC L+GHPNDKCP+++E+ N++RKYDP GNTYN+GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALATNT+SFQ
Subjt:  MAPLLGS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
         EMKQQM+QLT AISK++GKGKLPAQPD+ANVSAISLRSGKIL  P + E+KV S    L  +N+ KEE  E N S  + K  +
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

KAA0038454.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.7e-5667.24Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVC L+GH NDKCP+++E+ N++RKYDP GNTYN+GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALATNT SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
        T AISK++GKGKLPAQPDHANVSAISLRSGKIL  P + E+KV S    L  +N+ KEE  E N S  + K  +
Subjt:  TNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

KAA0051761.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.6e-5766.09Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDP GNTYN+GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
        T  ISK++GKGKL AQPDHANVS ISLRS KIL  P + E+KV S P  L  +N+ KEE  E N S  + K  +
Subjt:  TNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

XP_008465649.1 PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]4.5e-5764.67Show/hide
Query:  MAPLLGS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQ
        M  LL S   G  +KV KCGVCGL+G+PNDKCP ++E+ N++R+YDP GNTYN GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALATNT+SFQ
Subjt:  MAPLLGS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
         +MKQQM+QLT  ISK++GKGKLPAQPDH NVSAISLRSGKIL  P + E+KV S    L  +N+ KEE  E N+SS + K  +
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

XP_016902871.1 PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]7.6e-5766.09Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDP GNTYN+GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
        T  ISK++GKGKL AQPDHANVS ISLRS KIL  P + E+KV S P  L  +N+ KEE  E N S  + K  +
Subjt:  TNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

TrEMBL top hitse value%identityAlignment
A0A1S3CQU8 uncharacterized protein LOC1035032912.2e-5764.67Show/hide
Query:  MAPLLGS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQ
        M  LL S   G  +KV KCGVCGL+G+PNDKCP ++E+ N++R+YDP GNTYN GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALATNT+SFQ
Subjt:  MAPLLGS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
         +MKQQM+QLT  ISK++GKGKLPAQPDH NVSAISLRSGKIL  P + E+KV S    L  +N+ KEE  E N+SS + K  +
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

A0A1S4E3R2 uncharacterized protein LOC1079919103.7e-5766.09Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDP GNTYN+GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
        T  ISK++GKGKL AQPDHANVS ISLRS KIL  P + E+KV S P  L  +N+ KEE  E N S  + K  +
Subjt:  TNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

A0A5A7T4R3 Retrotransposon gag protein8.2e-5767.24Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVC L+GH NDKCP+++E+ N++RKYDP GNTYN+GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALATNT SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
        T AISK++GKGKLPAQPDHANVSAISLRSGKIL  P + E+KV S    L  +N+ KEE  E N S  + K  +
Subjt:  TNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

A0A5D3DCG3 Retrotransposon gag protein3.7e-5766.09Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDP GNTYN+GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
        T  ISK++GKGKL AQPDHANVS ISLRS KIL  P + E+KV S P  L  +N+ KEE  E N S  + K  +
Subjt:  TNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

E5GBZ4 Retrotransposon gag protein7.4e-5865.76Show/hide
Query:  MAPLLGS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQ
        M  LL S   G  +KV KCGVC L+GHPNDKCP+++E+ N++RKYDP GNTYN+GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALATNT+SFQ
Subjt:  MAPLLGS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
         EMKQQM+QLT AISK++GKGKLPAQPD+ANVSAISLRSGKIL  P + E+KV S    L  +N+ KEE  E N S  + K  +
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCGTTGCTGGGGAGCGACGGTGGAAATGTGAAAGTTGCCAAATGTGGAGTATGTGGATTAATAGGACATCCCAATGATAAGTGCCCTGACCTAGTGGAAGAGGC
AAATGTCATTAGGAAGTACGATCCCCAAGGAAATACTTACAACGCCGGTTGGAGAGACAATCCAAACCTTAGATGGGGAAACAATAATCAACAACCCACGCAAGCAACTC
CTTCTTCAAACAATCAAGGTACAAATTTGGAGGATTTGGTAAAAGCTCTTGCTACTAATACAATTTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCAATTAACAAAT
GCAATAAGCAAGTTAGAAGGCAAAGGTAAGCTGCCAGCTCAGCCTGATCATGCAAATGTAAGTGCCATCTCACTTAGAAGTGGTAAAATTCTGCAACCTCCTCCAAGTGA
AGAAAAGGTACCATCTAACCCTGACCTTCTAATTGATGAAAACAAGAAAAAGGAAGAAAATAAAGAAAACAATGCCTCTTCTCCTTCTTTAAAAGGAACCAGGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCGTTGCTGGGGAGCGACGGTGGAAATGTGAAAGTTGCCAAATGTGGAGTATGTGGATTAATAGGACATCCCAATGATAAGTGCCCTGACCTAGTGGAAGAGGC
AAATGTCATTAGGAAGTACGATCCCCAAGGAAATACTTACAACGCCGGTTGGAGAGACAATCCAAACCTTAGATGGGGAAACAATAATCAACAACCCACGCAAGCAACTC
CTTCTTCAAACAATCAAGGTACAAATTTGGAGGATTTGGTAAAAGCTCTTGCTACTAATACAATTTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCAATTAACAAAT
GCAATAAGCAAGTTAGAAGGCAAAGGTAAGCTGCCAGCTCAGCCTGATCATGCAAATGTAAGTGCCATCTCACTTAGAAGTGGTAAAATTCTGCAACCTCCTCCAAGTGA
AGAAAAGGTACCATCTAACCCTGACCTTCTAATTGATGAAAACAAGAAAAAGGAAGAAAATAAAGAAAACAATGCCTCTTCTCCTTCTTTAAAAGGAACCAGGGATTGA
Protein sequenceShow/hide protein sequence
MAPLLGSDGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLTN
AISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEKVPSNPDLLIDENKKKEENKENNASSPSLKGTRD