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PI0029144 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0029144
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTryptophan synthase beta type 2
Genome locationchr06:16857983..16858612
RNA-Seq ExpressionPI0029144
SyntenyPI0029144
Gene Ontology termsGO:0009704 - de-etiolation (biological process)
GO:0071277 - cellular response to calcium ion (biological process)
GO:0090333 - regulation of stomatal closure (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5961406.1 hypothetical protein HYC85_002615 [Camellia sinensis]1.7e-0964.18Show/hide
Query:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSPSSKTYAF
        R+VVNLK+K ++SLK+K         DYDK+EKSESMRVEIRSRKA+KL++++LK ADSP S+TYAF
Subjt:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSPSSKTYAF

KAG7036740.1 hypothetical protein SDJN02_00360, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-1584.85Show/hide
Query:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSPSSKTYA
        R+VVNLKAKIMKSLKMK   KAT  D YDKMEKSESMRVEIRSRKAQKLIQQ++K ADSPSSKTYA
Subjt:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSPSSKTYA

RYQ78961.1 hypothetical protein Ahy_Scaffold8g108431 [Arachis hypogaea]1.3e-0973.53Show/hide
Query:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSP-SSKTYAF
        R+VVNLK+KI KSLKM MK  ++ Y  YDKMEKSESMRVEIRSRKA+KLI+ +LK ADSP SSKTY F
Subjt:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSP-SSKTYAF

THG07542.1 hypothetical protein TEA_003531 [Camellia sinensis var. sinensis]1.7e-0964.18Show/hide
Query:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSPSSKTYAF
        R+VVNLK+K ++SLK+K         DYDK+EKSESMRVEIRSRKA+KL++++LK ADSP S+TYAF
Subjt:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSPSSKTYAF

TXG57851.1 hypothetical protein EZV62_015680 [Acer yangbiense]6.0e-1062.69Show/hide
Query:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSPSSKTYAF
        R++VNLK+KI +SLKMK+         YDK+EKSESMRVEIRSRKA+KL++Q+LK ADSP++KT+ F
Subjt:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSPSSKTYAF

TrEMBL top hitse value%identityAlignment
A0A445DAW0 Uncharacterized protein6.5e-1073.53Show/hide
Query:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSP-SSKTYAF
        R+VVNLK+KI KSLKM MK  ++ Y  YDKMEKSESMRVEIRSRKA+KLI+ +LK ADSP SSKTY F
Subjt:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSP-SSKTYAF

A0A4S4DW15 RNase H domain-containing protein8.4e-1064.18Show/hide
Query:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSPSSKTYAF
        R+VVNLK+K ++SLK+K         DYDK+EKSESMRVEIRSRKA+KL++++LK ADSP S+TYAF
Subjt:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSPSSKTYAF

A0A5C7HLI3 Uncharacterized protein2.9e-1062.69Show/hide
Query:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSPSSKTYAF
        R++VNLK+KI +SLKMK+         YDK+EKSESMRVEIRSRKA+KL++Q+LK ADSP++KT+ F
Subjt:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSPSSKTYAF

A0A7J7IA61 Uncharacterized protein8.4e-1064.18Show/hide
Query:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSPSSKTYAF
        R+VVNLK+K ++SLK+K         DYDK+EKSESMRVEIRSRKA+KL++++LK ADSP S+TYAF
Subjt:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSPSSKTYAF

M1AMJ5 Uncharacterized protein2.5e-0959.7Show/hide
Query:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSPSSKTYAF
        R++VNLK K+ +S KMK        + YDK+EKSESMRVEIRS+KA+KLI+Q+LK ADSP S++Y F
Subjt:  RVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSPSSKTYAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTTGAGGGTAGTAGTGAATTTGAAAGCAAAAATAATGAAGTCATTGAAGATGAAGATGAAGATGAAAGCAACAAATTATGATGATTATGATAAGATGGAGAAAAG
TGAAAGCATGAGAGTTGAAATCAGAAGCAGAAAGGCCCAAAAGCTCATCCAACAGTCCTTGAAATTTGCTGACTCTCCCTCCTCTAAAACTTATGCTTTTTGA
mRNA sequenceShow/hide mRNA sequence
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTTTGCCATTTTTGTTGTGAAATTTTGCAGGTTAGGTTATTGTGTGAAGGGAA
AAAGCTAAGGATGGTGTTGAGGGTAGTAGTGAATTTGAAAGCAAAAATAATGAAGTCATTGAAGATGAAGATGAAGATGAAAGCAACAAATTATGATGATTATGATAAGA
TGGAGAAAAGTGAAAGCATGAGAGTTGAAATCAGAAGCAGAAAGGCCCAAAAGCTCATCCAACAGTCCTTGAAATTTGCTGACTCTCCCTCCTCTAAAACTTATGCTTTT
TGATTTTTTTTATTAATTCTCTCTTATATCTCAATCAATTCCACCCCCTTTTATCTACCCTTTTCTCCCTTCATCACTTTATAATTATGAAGAAAAGTATAAAATAAGTC
TCTTTTCCTTCTTCTCTCATCTTCTTCTTCTCTCATCCTCTTTTTGTCCCATTTTTTCCTTTTGTCGTTGAAACCATGAAATTCATAGTTACTAATACATTTTGTATGTC
AATTCAGCTACACTCCCTTCGTCAAACAGTGTTTAAATTTTCTATTTTATATATATATATGAGAGACTGTGTTTTTATTA
Protein sequenceShow/hide protein sequence
MVLRVVVNLKAKIMKSLKMKMKMKATNYDDYDKMEKSESMRVEIRSRKAQKLIQQSLKFADSPSSKTYAF