CuGenDBv2

Gene ID	PI0029202
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Myelin transcription factor 1-like protein
Genome location	chr02:24645021..24645406
RNA-Seq Expression	PI0029202
Synteny	PI0029202
Gene Ontology terms	GO:0070125 - mitochondrial translational elongation (biological process) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003746 - translation elongation factor activity (molecular function) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0057816.1 hypothetical protein E6C27_scaffold274G001000 [Cucumis melo var. makuwa]

3.7e-41

84.38

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Query:  MLTPATATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERGL
        MLTP TATATSAIFVLLSGLC+VVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA              KITADVAMYLA+VMVKERGL
Subjt:  MLTPATATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERGL

Query:  LAVGFAAVFSFVAVVRSTEIDLLSSFSA
        LAV FAA+FSFVAV RSTEIDLLSSFSA
Subjt:  LAVGFAAVFSFVAVVRSTEIDLLSSFSA

KGN63537.2 hypothetical protein Csa_013462 [Cucumis sativus]

2.9e-38

80.47

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Query:  MLTPATATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERGL
        MLTP  ATATSAIFVLLSGLCF+VFNSDNLMGRWLPILGLLAVA V LMAARATMVAWITVLVLLA              KITADVAMYLA+V+VKERGL
Subjt:  MLTPATATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERGL

Query:  LAVGFAAVFSFVAVVRSTEIDLLSSFSA
        LAV FAA+FSF+AV+RSTEIDLLSSFSA
Subjt:  LAVGFAAVFSFVAVVRSTEIDLLSSFSA

XP_022933693.1 uncharacterized protein LOC111441029 [Cucurbita moschata]

2.8e-25

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Query:  MLTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERG
        M TP T A   S IF+LLSG C VV N D LMGRW+PI+GLL VAGVA++AARATMVAWITVLVLLA              +ITADVAMYL AV+VKERG
Subjt:  MLTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERG

Query:  LLAVGFAAVFSFVAVVRSTEIDLLS
        L+AVGFAAV S VAVVRS EID LS
Subjt:  LLAVGFAAVFSFVAVVRSTEIDLLS

XP_023004957.1 uncharacterized protein LOC111498104 [Cucurbita maxima]

7.4e-26

68.8

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Query:  MLTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERG
        M TPAT A   S IF+LLSG C VV N D LMGRW+PI+GLL VAGVA++AARATMVAWITVLVLLA              +ITADVAMYL+AV+VKERG
Subjt:  MLTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERG

Query:  LLAVGFAAVFSFVAVVRSTEIDLLS
        L+AV FAAV SFVAVVRS EID LS
Subjt:  LLAVGFAAVFSFVAVVRSTEIDLLS

XP_023530771.1 uncharacterized protein LOC111793221 [Cucurbita pepo subsp. pepo]

2.8e-25

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Query:  MLTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERG
        M TP T A   S IF+LLSG C VV N D LMGRW+PI+GLL VAGVA++AARATMVAWITVLVLLA              +ITADVAMYL AV+VKERG
Subjt:  MLTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERG

Query:  LLAVGFAAVFSFVAVVRSTEIDLLS
        L+AV FAAV SFVAVVRS EID LS
Subjt:  LLAVGFAAVFSFVAVVRSTEIDLLS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNT4 Uncharacterized protein

1.7e-36

81.15

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Query:  ATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERGLLAVGFA
        ATATSAIFVLLSGLCF+VFNSDNLMGRWLPILGLLAVA V LMAARATMVAWITVLVLLA              KITADVAMYLA+V+VKERGLLAV FA
Subjt:  ATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERGLLAVGFA

Query:  AVFSFVAVVRSTEIDLLSSFSA
        A+FSF+AV+RSTEIDLLSSFSA
Subjt:  AVFSFVAVVRSTEIDLLSSFSA

A0A0A0LRZ2 Uncharacterized protein

1.1e-38

81.25

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Query:  MLTPATATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERGL
        MLTP TATATSAIFVLLSGLCF+VFNSDNLMGRWLPILGLLAVA VALMAARATMVAWITVLVLLA              KITADVAMYLA+V+VKERGL
Subjt:  MLTPATATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERGL

Query:  LAVGFAAVFSFVAVVRSTEIDLLSSFSA
        LAV FAA+FSF+AV+RSTEI LLSSFSA
Subjt:  LAVGFAAVFSFVAVVRSTEIDLLSSFSA

A0A5D3BFC5 Uncharacterized protein

1.8e-41

84.38

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Query:  MLTPATATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERGL
        MLTP TATATSAIFVLLSGLC+VVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA              KITADVAMYLA+VMVKERGL
Subjt:  MLTPATATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERGL

Query:  LAVGFAAVFSFVAVVRSTEIDLLSSFSA
        LAV FAA+FSFVAV RSTEIDLLSSFSA
Subjt:  LAVGFAAVFSFVAVVRSTEIDLLSSFSA

A0A6J1F5J3 uncharacterized protein LOC111441029

1.4e-25

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Query:  MLTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERG
        M TP T A   S IF+LLSG C VV N D LMGRW+PI+GLL VAGVA++AARATMVAWITVLVLLA              +ITADVAMYL AV+VKERG
Subjt:  MLTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERG

Query:  LLAVGFAAVFSFVAVVRSTEIDLLS
        L+AVGFAAV S VAVVRS EID LS
Subjt:  LLAVGFAAVFSFVAVVRSTEIDLLS

A0A6J1KRU7 uncharacterized protein LOC111498104

3.6e-26

68.8

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Query:  MLTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERG
        M TPAT A   S IF+LLSG C VV N D LMGRW+PI+GLL VAGVA++AARATMVAWITVLVLLA              +ITADVAMYL+AV+VKERG
Subjt:  MLTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLA--------------KITADVAMYLAAVMVKERG

Query:  LLAVGFAAVFSFVAVVRSTEIDLLS
        L+AV FAAV SFVAVVRS EID LS
Subjt:  LLAVGFAAVFSFVAVVRSTEIDLLS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTTGACACCGGCGACGGCGACGGCGACATCCGCCATTTTTGTTCTTCTTTCAGGTTTGTGTTTTGTCGTTTTCAATTCCGATAATTTAATGGGGCGGTGGCTACCAAT
TCTGGGGTTGTTGGCCGTGGCCGGAGTGGCGTTGATGGCGGCCAGAGCCACGATGGTGGCGTGGATCACGGTGTTGGTGCTATTGGCAAAGATCACCGCCGATGTAGCCA
TGTACTTGGCCGCCGTTATGGTTAAAGAAAGAGGGCTTCTTGCTGTTGGTTTCGCCGCCGTCTTCAGCTTCGTCGCCGTCGTTCGTTCGACGGAGATCGATCTACTTTCT
TCTTTCTCCGCTTAA

mRNA sequence

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Protein sequence

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MLTPATATATSAIFVLLSGLCFVVFNSDNLMGRWLPILGLLAVAGVALMAARATMVAWITVLVLLAKITADVAMYLAAVMVKERGLLAVGFAAVFSFVAVVRSTEIDLLS
SFSA

PI0029202 (gene) of Melon (PI 482460) v1 genome