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PI0029208 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0029208
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr01:17663733..17665127
RNA-Seq ExpressionPI0029208
SyntenyPI0029208
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054837.1 hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa]1.8e-2129.74Show/hide
Query:  RDLEVIA--EELEEELEAMSPLDQGL---PPRKQREVAGPSKGKKKIGSSGPEERPSGGEAKTKILS-----------------------INSLIKTFGW
        RD +++   E  EE+   +SPL++ +    PRK+++        +++     ++     E +  +LS                       + + IK  GW
Subjt:  RDLEVIA--EELEEELEAMSPLDQGL---PPRKQREVAGPSKGKKKIGSSGPEERPSGGEAKTKILS-----------------------INSLIKTFGW

Query:  KKFFKGHTKIRIGVVEKFYAAKLNAEEFSVEMSGKTVSFDAEAINSL---------YEVPNDVETPGQEYVLTTEASVWLFFIKKKIFPTRHDSTINLES
        ++F +G   IR GVV+ FY  K++ E+    +  +    D +   +L         ++V +  +     + LTTEASVWL FIKKK+ PTRHD+TI+ E 
Subjt:  KKFFKGHTKIRIGVVEKFYAAKLNAEEFSVEMSGKTVSFDAEAINSL---------YEVPNDVETPGQEYVLTTEASVWLFFIKKKIFPTRHDSTINLES

Query:  VMLLYCILTKKRVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVKVVPFLGAMNTVP-IPGGLCNQMS
        +MLLYCI+ +  V++ ++I   I AW+Q P+GA PFP ++E LC++    L     +  +  G+CN  S
Subjt:  VMLLYCILTKKRVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVKVVPFLGAMNTVP-IPGGLCNQMS

KAA0058997.1 hypothetical protein E6C27_scaffold233G00130 [Cucumis melo var. makuwa]4.7e-2245.93Show/hide
Query:  KGHTKIRIGVVEKFYAAKLNAEEFSVEMSGKTVSFDAEAINSLYEVPNDVET-PGQEYV-LTTEASVWLFFIKKKIFPTRHDSTINLESVMLLYCILTKK
        +G TK++I VV+ FYA K +  +    M  + VSF AE IN LY +P++ E   G + +   T+A+V LFF+KKKI P  HDS +  E  MLLYCIL ++
Subjt:  KGHTKIRIGVVEKFYAAKLNAEEFSVEMSGKTVSFDAEAINSLYEVPNDVET-PGQEYV-LTTEASVWLFFIKKKIFPTRHDSTINLESVMLLYCILTKK

Query:  RVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVK
          ++  +I + +LAWM+ PKGA P PSIVE  C+K
Subjt:  RVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVK

KAA0062068.1 hypothetical protein E6C27_scaffold89G004130 [Cucumis melo var. makuwa]3.1e-1835.84Show/hide
Query:  AKTKILSINSLIKTFGWKKFFKGHTKIRIGVVEKFYAAKLNAEEFSVEMSGKTVSFDAEAINSLYEVPNDVETPGQEYV--LTTEASVWLFFIKKKIFPT
        +  K+L  ++ +K FG  KF +G TK+++ VV+ FYAAK +  +      G+ + F AE IN LY + N+ E  G E +  LT E             P 
Subjt:  AKTKILSINSLIKTFGWKKFFKGHTKIRIGVVEKFYAAKLNAEEFSVEMSGKTVSFDAEAINSLYEVPNDVETPGQEYV--LTTEASVWLFFIKKKIFPT

Query:  RHDSTINLESVMLLYCILTKKRVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVKVV-PFLGAMNTVPIPGG
        +HDS +  E  ++L+CI+TK+  +L  +I  ++L +M+  K A  FPS VE LC+K V PFL  +    +P G
Subjt:  RHDSTINLESVMLLYCILTKKRVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVKVV-PFLGAMNTVPIPGG

KAA0063168.1 hypothetical protein E6C27_scaffold381G00540 [Cucumis melo var. makuwa]3.4e-2035.45Show/hide
Query:  KGHTKIRIGVVEKFY-AAKLNAEEFSVEMSGKTVSFDAEAINSLYEVPNDVET-PGQEYVLTTEASVWLFFIKKKIFPTRHDSTINLESVMLLYCILTKK
        K   K R   +E      K   ++    + G+ V F  + IN LY +PND +  PG++ +             KKI PT+HDSTI +E V+ LYCI+ KK
Subjt:  KGHTKIRIGVVEKFY-AAKLNAEEFSVEMSGKTVSFDAEAINSLYEVPNDVET-PGQEYVLTTEASVWLFFIKKKIFPTRHDSTINLESVMLLYCILTKK

Query:  RVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVKVVPFLGAMNTVPIPGGLCNQMSLNRMITLHAHKEMERRSKTLGDTATEGATQAD
          NLG ++  + L WM+ PKG+  FP++ +  C K +  L       + GG CN  SLNR+ TL+ +KE E + K      T+ AT  D
Subjt:  RVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVKVVPFLGAMNTVPIPGGLCNQMSLNRMITLHAHKEMERRSKTLGDTATEGATQAD

TYJ96034.1 hypothetical protein E5676_scaffold2612G00500 [Cucumis melo var. makuwa]1.0e-2141.38Show/hide
Query:  SLIKTFGWKKFFKGHTKIRIGVVEKFYAAKLNAEEFSVEMSGKTVSFDAEAINSLYEVPNDVETPGQEYVLTTEASVWLFFIKKKIFPTRHDSTINLESV
        S I+   WK+FF+G   IR GVV+ FY   +NA+E   E+ GK V F  EAIN+LY + N                   + I+  I PTRHD+TI+LE +
Subjt:  SLIKTFGWKKFFKGHTKIRIGVVEKFYAAKLNAEEFSVEMSGKTVSFDAEAINSLYEVPNDVETPGQEYVLTTEASVWLFFIKKKIFPTRHDSTINLESV

Query:  MLLYCILTKKRVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVK
        MLLYCI+ +  VN+G++I   +  W++ P GA PF  ++E LC+K
Subjt:  MLLYCILTKKRVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVK

TrEMBL top hitse value%identityAlignment
A0A5A7V6C0 Uncharacterized protein1.6e-2035.45Show/hide
Query:  KGHTKIRIGVVEKFY-AAKLNAEEFSVEMSGKTVSFDAEAINSLYEVPNDVET-PGQEYVLTTEASVWLFFIKKKIFPTRHDSTINLESVMLLYCILTKK
        K   K R   +E      K   ++    + G+ V F  + IN LY +PND +  PG++ +             KKI PT+HDSTI +E V+ LYCI+ KK
Subjt:  KGHTKIRIGVVEKFY-AAKLNAEEFSVEMSGKTVSFDAEAINSLYEVPNDVET-PGQEYVLTTEASVWLFFIKKKIFPTRHDSTINLESVMLLYCILTKK

Query:  RVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVKVVPFLGAMNTVPIPGGLCNQMSLNRMITLHAHKEMERRSKTLGDTATEGATQAD
          NLG ++  + L WM+ PKG+  FP++ +  C K +  L       + GG CN  SLNR+ TL+ +KE E + K      T+ AT  D
Subjt:  RVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVKVVPFLGAMNTVPIPGGLCNQMSLNRMITLHAHKEMERRSKTLGDTATEGATQAD

A0A5D3BAP9 Uncharacterized protein5.1e-2241.38Show/hide
Query:  SLIKTFGWKKFFKGHTKIRIGVVEKFYAAKLNAEEFSVEMSGKTVSFDAEAINSLYEVPNDVETPGQEYVLTTEASVWLFFIKKKIFPTRHDSTINLESV
        S I+   WK+FF+G   IR GVV+ FY   +NA+E   E+ GK V F  EAIN+LY + N                   + I+  I PTRHD+TI+LE +
Subjt:  SLIKTFGWKKFFKGHTKIRIGVVEKFYAAKLNAEEFSVEMSGKTVSFDAEAINSLYEVPNDVETPGQEYVLTTEASVWLFFIKKKIFPTRHDSTINLESV

Query:  MLLYCILTKKRVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVK
        MLLYCI+ +  VN+G++I   +  W++ P GA PF  ++E LC+K
Subjt:  MLLYCILTKKRVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVK

A0A5D3C198 Uncharacterized protein1.5e-1835.84Show/hide
Query:  AKTKILSINSLIKTFGWKKFFKGHTKIRIGVVEKFYAAKLNAEEFSVEMSGKTVSFDAEAINSLYEVPNDVETPGQEYV--LTTEASVWLFFIKKKIFPT
        +  K+L  ++ +K FG  KF +G TK+++ VV+ FYAAK +  +      G+ + F AE IN LY + N+ E  G E +  LT E             P 
Subjt:  AKTKILSINSLIKTFGWKKFFKGHTKIRIGVVEKFYAAKLNAEEFSVEMSGKTVSFDAEAINSLYEVPNDVETPGQEYV--LTTEASVWLFFIKKKIFPT

Query:  RHDSTINLESVMLLYCILTKKRVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVKVV-PFLGAMNTVPIPGG
        +HDS +  E  ++L+CI+TK+  +L  +I  ++L +M+  K A  FPS VE LC+K V PFL  +    +P G
Subjt:  RHDSTINLESVMLLYCILTKKRVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVKVV-PFLGAMNTVPIPGG

A0A5D3D7S2 Uncharacterized protein2.3e-2245.93Show/hide
Query:  KGHTKIRIGVVEKFYAAKLNAEEFSVEMSGKTVSFDAEAINSLYEVPNDVET-PGQEYV-LTTEASVWLFFIKKKIFPTRHDSTINLESVMLLYCILTKK
        +G TK++I VV+ FYA K +  +    M  + VSF AE IN LY +P++ E   G + +   T+A+V LFF+KKKI P  HDS +  E  MLLYCIL ++
Subjt:  KGHTKIRIGVVEKFYAAKLNAEEFSVEMSGKTVSFDAEAINSLYEVPNDVET-PGQEYV-LTTEASVWLFFIKKKIFPTRHDSTINLESVMLLYCILTKK

Query:  RVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVK
          ++  +I + +LAWM+ PKGA P PSIVE  C+K
Subjt:  RVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVK

A0A5D3DVQ6 Uncharacterized protein8.6e-2229.74Show/hide
Query:  RDLEVIA--EELEEELEAMSPLDQGL---PPRKQREVAGPSKGKKKIGSSGPEERPSGGEAKTKILS-----------------------INSLIKTFGW
        RD +++   E  EE+   +SPL++ +    PRK+++        +++     ++     E +  +LS                       + + IK  GW
Subjt:  RDLEVIA--EELEEELEAMSPLDQGL---PPRKQREVAGPSKGKKKIGSSGPEERPSGGEAKTKILS-----------------------INSLIKTFGW

Query:  KKFFKGHTKIRIGVVEKFYAAKLNAEEFSVEMSGKTVSFDAEAINSL---------YEVPNDVETPGQEYVLTTEASVWLFFIKKKIFPTRHDSTINLES
        ++F +G   IR GVV+ FY  K++ E+    +  +    D +   +L         ++V +  +     + LTTEASVWL FIKKK+ PTRHD+TI+ E 
Subjt:  KKFFKGHTKIRIGVVEKFYAAKLNAEEFSVEMSGKTVSFDAEAINSL---------YEVPNDVETPGQEYVLTTEASVWLFFIKKKIFPTRHDSTINLES

Query:  VMLLYCILTKKRVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVKVVPFLGAMNTVP-IPGGLCNQMS
        +MLLYCI+ +  V++ ++I   I AW+Q P+GA PFP ++E LC++    L     +  +  G+CN  S
Subjt:  VMLLYCILTKKRVNLGDLIATSILAWMQAPKGAMPFPSIVEALCVKVVPFLGAMNTVP-IPGGLCNQMS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGCGGACCTGAGCGAGCAAGTAACGGAGCTCCCTGCGAAGTTTAAGGCTTTGGAGCTTAAAAGAGACCTCGAGGTCATTGCTGAAGAACTCGAGGAAGAGCTGGA
GGCGATGAGCCCACTTGATCAAGGGCTACCGCCTAGAAAACAAAGGGAGGTCGCCGGACCATCCAAAGGGAAAAAGAAGATTGGGAGCTCTGGACCTGAAGAGCGCCCAT
CCGGTGGTGAAGCCAAAACAAAAATACTCTCAATCAACTCACTGATAAAGACGTTTGGCTGGAAGAAATTTTTTAAAGGGCACACCAAGATACGAATAGGTGTGGTGGAG
AAGTTTTACGCCGCTAAACTCAATGCTGAGGAGTTTAGCGTTGAAATGAGTGGAAAAACGGTGAGTTTCGACGCAGAGGCCATCAACAGTCTATACGAAGTGCCCAACGA
TGTTGAAACGCCTGGGCAAGAATATGTGCTAACCACAGAAGCAAGCGTGTGGCTATTCTTCATCAAAAAGAAGATATTCCCTACGCGACATGACAGCACCATTAACTTAG
AGTCAGTGATGCTACTTTACTGCATACTGACAAAGAAGCGTGTCAATCTCGGCGATCTGATAGCTACATCCATTCTGGCTTGGATGCAAGCTCCCAAGGGCGCCATGCCC
TTCCCATCTATAGTTGAAGCCCTCTGCGTGAAGGTTGTGCCATTTCTAGGCGCCATGAACACTGTCCCAATTCCAGGCGGTCTGTGCAATCAAATGTCTTTGAATCGCAT
GATCACCCTCCATGCTCACAAGGAAATGGAGAGGCGGTCCAAGACATTGGGTGACACAGCAACTGAAGGCGCGACCCAAGCAGATCGCAAAAGAAAAGCCCCAACCGCCG
CATCAACCCCTCAACCAAAAGTCAAAAAATCAAAGGTTGATGCGGCAAAACAACCCTTGCCACTCAAAGTCATCCACCCTCCTTCCAGCCCAACCAAAAGAACTCCCTGC
AAAATCCAAAAGGATTCCAGCCTCTCCCAACCTCCTCGCCACTCTTCGCCTACTCCATCCAACCCACCCTCCCCCATCATTTCCCCCAACCATTCACCTCTTCCCCACCT
CTTATCCCCCATCAACGCACCCAGCCTTTCCCTACGACCGCATACCCCTCCGCCCACAAAAATACCATCTCCCACCCTTCCTCCAAAGTGTTGGGTTTTATGTCTTAAAA
CTCGTAGATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGCGGACCTGAGCGAGCAAGTAACGGAGCTCCCTGCGAAGTTTAAGGCTTTGGAGCTTAAAAGAGACCTCGAGGTCATTGCTGAAGAACTCGAGGAAGAGCTGGA
GGCGATGAGCCCACTTGATCAAGGGCTACCGCCTAGAAAACAAAGGGAGGTCGCCGGACCATCCAAAGGGAAAAAGAAGATTGGGAGCTCTGGACCTGAAGAGCGCCCAT
CCGGTGGTGAAGCCAAAACAAAAATACTCTCAATCAACTCACTGATAAAGACGTTTGGCTGGAAGAAATTTTTTAAAGGGCACACCAAGATACGAATAGGTGTGGTGGAG
AAGTTTTACGCCGCTAAACTCAATGCTGAGGAGTTTAGCGTTGAAATGAGTGGAAAAACGGTGAGTTTCGACGCAGAGGCCATCAACAGTCTATACGAAGTGCCCAACGA
TGTTGAAACGCCTGGGCAAGAATATGTGCTAACCACAGAAGCAAGCGTGTGGCTATTCTTCATCAAAAAGAAGATATTCCCTACGCGACATGACAGCACCATTAACTTAG
AGTCAGTGATGCTACTTTACTGCATACTGACAAAGAAGCGTGTCAATCTCGGCGATCTGATAGCTACATCCATTCTGGCTTGGATGCAAGCTCCCAAGGGCGCCATGCCC
TTCCCATCTATAGTTGAAGCCCTCTGCGTGAAGGTTGTGCCATTTCTAGGCGCCATGAACACTGTCCCAATTCCAGGCGGTCTGTGCAATCAAATGTCTTTGAATCGCAT
GATCACCCTCCATGCTCACAAGGAAATGGAGAGGCGGTCCAAGACATTGGGTGACACAGCAACTGAAGGCGCGACCCAAGCAGATCGCAAAAGAAAAGCCCCAACCGCCG
CATCAACCCCTCAACCAAAAGTCAAAAAATCAAAGGTTGATGCGGCAAAACAACCCTTGCCACTCAAAGTCATCCACCCTCCTTCCAGCCCAACCAAAAGAACTCCCTGC
AAAATCCAAAAGGATTCCAGCCTCTCCCAACCTCCTCGCCACTCTTCGCCTACTCCATCCAACCCACCCTCCCCCATCATTTCCCCCAACCATTCACCTCTTCCCCACCT
CTTATCCCCCATCAACGCACCCAGCCTTTCCCTACGACCGCATACCCCTCCGCCCACAAAAATACCATCTCCCACCCTTCCTCCAAAGTGTTGGGTTTTATGTCTTAAAA
CTCGTAGATTGTAA
Protein sequenceShow/hide protein sequence
MLADLSEQVTELPAKFKALELKRDLEVIAEELEEELEAMSPLDQGLPPRKQREVAGPSKGKKKIGSSGPEERPSGGEAKTKILSINSLIKTFGWKKFFKGHTKIRIGVVE
KFYAAKLNAEEFSVEMSGKTVSFDAEAINSLYEVPNDVETPGQEYVLTTEASVWLFFIKKKIFPTRHDSTINLESVMLLYCILTKKRVNLGDLIATSILAWMQAPKGAMP
FPSIVEALCVKVVPFLGAMNTVPIPGGLCNQMSLNRMITLHAHKEMERRSKTLGDTATEGATQADRKRKAPTAASTPQPKVKKSKVDAAKQPLPLKVIHPPSSPTKRTPC
KIQKDSSLSQPPRHSSPTPSNPPSPIISPNHSPLPHLLSPINAPSLSLRPHTPPPTKIPSPTLPPKCWVLCLKTRRL