; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0000005 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0000005
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description50S ribosomal protein L35
Genome locationchr04:33222297..33222915
RNA-Seq ExpressionPay0000005
SyntenyPay0000005
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044224.1 RING-H2 finger protein ATL74-like [Cucumis melo var. makuwa]2.1e-5699.16Show/hide
Query:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG
        MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQ WHVGHQIG
Subjt:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG

Query:  VGFGYLVALKTQIGLANAV
        VGFGYLVALKTQIGLANAV
Subjt:  VGFGYLVALKTQIGLANAV

KAE8650972.1 hypothetical protein Csa_002588 [Cucumis sativus]1.0e-7183.43Show/hide
Query:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVG----
        MAIGHRRSFKISV AKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKS SR+L+QRRRTLKSRMLSFVKKHLG  RSK PH+ES+Y+SWHVG    
Subjt:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVG----

Query:  ---HQIGVGFGY-LVALKTQIGLANAVGSSFSSIIWVYLCVFVIWLQKCKYLWAVLLLVPLFPLLLFQLDTFVHLLHLRHF
              GVG GY +VALKTQI LANA+G SFSSIIWVYLCVFV+WLQKCKYLWA+LLL+PLFPLLLFQLDTFVHLLHLR F
Subjt:  ---HQIGVGFGY-LVALKTQIGLANAVGSSFSSIIWVYLCVFVIWLQKCKYLWAVLLLVPLFPLLLFQLDTFVHLLHLRHF

TYK24910.1 50S ribosomal protein L35 [Cucumis melo var. makuwa]3.1e-55100Show/hide
Query:  GHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIGVGF
        GHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIGVGF
Subjt:  GHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIGVGF

Query:  GYLVALKTQIGLANA
        GYLVALKTQIGLANA
Subjt:  GYLVALKTQIGLANA

XP_008442323.1 PREDICTED: uncharacterized protein LOC103486229 [Cucumis melo]4.7e-88100Show/hide
Query:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG
        MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG
Subjt:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG

Query:  VGFGYLVALKTQIGLANAVGSSFSSIIWVYLCVFVIWLQKCKYLWAVLLLVPLFPLLLFQLDTFVHLLHLRHFF
        VGFGYLVALKTQIGLANAVGSSFSSIIWVYLCVFVIWLQKCKYLWAVLLLVPLFPLLLFQLDTFVHLLHLRHFF
Subjt:  VGFGYLVALKTQIGLANAVGSSFSSIIWVYLCVFVIWLQKCKYLWAVLLLVPLFPLLLFQLDTFVHLLHLRHFF

XP_038906422.1 uncharacterized protein LOC120092221 [Benincasa hispida]3.0e-5872.28Show/hide
Query:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQ--
        MA+G RRSFKI+VHAKICNLYIKLKATLK PSGK QRLLKLDKLLI  DSKSES +LVQRRRTLKSRMLSFVKKHLG  RSK+PH+ES+ QSW VG    
Subjt:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQ--

Query:  -----IGVGFGYLVALKTQIGLANAVGSSFSSIIWVYLC--VFVIWLQKCK--YLWAVLLLVPLFPLLLFQLDTFVHLLHLRHF
              GVG GYL+AL T IGL NA+  SFSS IWV LC  +FV+WL KCK  YLWA+L L+ L PL L QLD FVHLLHLRHF
Subjt:  -----IGVGFGYLVALKTQIGLANAVGSSFSSIIWVYLC--VFVIWLQKCK--YLWAVLLLVPLFPLLLFQLDTFVHLLHLRHF

TrEMBL top hitse value%identityAlignment
A0A0A0LCL9 50S ribosomal protein L356.4e-5181.43Show/hide
Query:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVG----
        MAIGHRRSFKISV AKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKS SR+L+QRRRTLKSRMLSFVKKHLG  RSK PH+ES+Y+SWHVG    
Subjt:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVG----

Query:  ---HQIGVGFGY-LVALKTQIGLANAVGSSFSSIIWVYLC
              GVG GY +VALKTQI LANA+G SFSSIIWVYLC
Subjt:  ---HQIGVGFGY-LVALKTQIGLANAVGSSFSSIIWVYLC

A0A1S3B4Y8 uncharacterized protein LOC1034862292.3e-88100Show/hide
Query:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG
        MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG
Subjt:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG

Query:  VGFGYLVALKTQIGLANAVGSSFSSIIWVYLCVFVIWLQKCKYLWAVLLLVPLFPLLLFQLDTFVHLLHLRHFF
        VGFGYLVALKTQIGLANAVGSSFSSIIWVYLCVFVIWLQKCKYLWAVLLLVPLFPLLLFQLDTFVHLLHLRHFF
Subjt:  VGFGYLVALKTQIGLANAVGSSFSSIIWVYLCVFVIWLQKCKYLWAVLLLVPLFPLLLFQLDTFVHLLHLRHFF

A0A5A7TM08 RING-H2 finger protein ATL74-like1.0e-5699.16Show/hide
Query:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG
        MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQ WHVGHQIG
Subjt:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG

Query:  VGFGYLVALKTQIGLANAV
        VGFGYLVALKTQIGLANAV
Subjt:  VGFGYLVALKTQIGLANAV

A0A5D3DNQ2 50S ribosomal protein L351.5e-55100Show/hide
Query:  GHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIGVGF
        GHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIGVGF
Subjt:  GHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIGVGF

Query:  GYLVALKTQIGLANA
        GYLVALKTQIGLANA
Subjt:  GYLVALKTQIGLANA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATAGGTCATCGGCGGTCATTCAAAATCAGCGTTCATGCCAAGATCTGTAACCTTTATATCAAGCTGAAGGCCACTCTGAAACTTCCTTCCGGGAAATTCCAACG
CCTCCTAAAGCTTGATAAACTACTCATCGAAGTGGATTCCAAATCCGAATCTCGGGTCCTCGTTCAACGGCGACGGACTTTGAAATCTCGAATGCTCAGCTTCGTCAAGA
AGCATTTGGGGCGTTGCCGATCTAAAATCCCACATTCTGAATCTAAATATCAATCTTGGCATGTTGGCCATCAGATTGGTGTGGGATTTGGTTATCTGGTTGCACTCAAG
ACACAAATTGGGCTTGCAAATGCGGTTGGTTCCAGCTTCAGCTCCATTATATGGGTTTACCTGTGTGTATTTGTTATATGGCTCCAGAAATGTAAGTACCTTTGGGCAGT
GCTATTGCTAGTTCCTCTGTTTCCTCTCTTACTCTTCCAATTGGATACATTTGTACATCTTTTACATTTACGCCACTTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATAGGTCATCGGCGGTCATTCAAAATCAGCGTTCATGCCAAGATCTGTAACCTTTATATCAAGCTGAAGGCCACTCTGAAACTTCCTTCCGGGAAATTCCAACG
CCTCCTAAAGCTTGATAAACTACTCATCGAAGTGGATTCCAAATCCGAATCTCGGGTCCTCGTTCAACGGCGACGGACTTTGAAATCTCGAATGCTCAGCTTCGTCAAGA
AGCATTTGGGGCGTTGCCGATCTAAAATCCCACATTCTGAATCTAAATATCAATCTTGGCATGTTGGCCATCAGATTGGTGTGGGATTTGGTTATCTGGTTGCACTCAAG
ACACAAATTGGGCTTGCAAATGCGGTTGGTTCCAGCTTCAGCTCCATTATATGGGTTTACCTGTGTGTATTTGTTATATGGCTCCAGAAATGTAAGTACCTTTGGGCAGT
GCTATTGCTAGTTCCTCTGTTTCCTCTCTTACTCTTCCAATTGGATACATTTGTACATCTTTTACATTTACGCCACTTTTTCTAA
Protein sequenceShow/hide protein sequence
MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIGVGFGYLVALK
TQIGLANAVGSSFSSIIWVYLCVFVIWLQKCKYLWAVLLLVPLFPLLLFQLDTFVHLLHLRHFF