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Pay0000024 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0000024
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionBeta-galactosidase
Genome locationchr01:18987933..18988617
RNA-Seq ExpressionPay0000024
SyntenyPay0000024
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042054.1 myosin-9 isoform X2 [Cucumis melo var. makuwa]6.1e-6671.94Show/hide
Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYV--------------------
        MEE++ALEKN+TWEICALPK HK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFS VAKLN V VLL V                    
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYV--------------------

Query:  --VSQGY-------------NQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGISVS
          V + Y             +QGHSDHTLFTK SKTGKIAILIVY+DDIVLTGDDQT+ISQLKQ+M DEF IKDL NLKYFLGMEVARSKEGISVS
Subjt:  --VSQGY-------------NQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGISVS

KAA0050612.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-6783.33Show/hide
Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYV-VSQGYNQGHSDHTLFTKVS
        MEE++ LEKNKTWEIC LPK HK VGCKW+FSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFS VAKLN V VLL V +++GY+QGHS HTLFTKV 
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYV-VSQGYNQGHSDHTLFTKVS

Query:  KTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGISVS
        K  KI ILIVY+DDIVLTGDDQT+ISQLKQ+M DEF IKDL NLKYFLGMEVARSKEGISVS
Subjt:  KTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGISVS

KAA0053629.1 Beta-galactosidase [Cucumis melo var. makuwa]2.9e-6870.79Show/hide
Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLL----------------------
        MEEI+ALEKN+TWEICALPK HK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFS VAKLN V VLL                      
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLL----------------------

Query:  -------------------YVVSQGYNQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGIS
                           +V SQGY+QGHSDHTLFTK SKTGKIAILI+Y+DDIVLTGDDQT+ISQLKQ+M DEF IKDL NLKYFLGMEVARSKEGIS
Subjt:  -------------------YVVSQGYNQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGIS

Query:  VS
        VS
Subjt:  VS

KAA0068096.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.7e-6669.85Show/hide
Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVV-------------------
        +EE++ALEKN+TWEICALPKRHK VGCKWVFSLKYKADG LDRHKARLVAKGFTQTYGIDYSETFS VAKLNIV VLL V                    
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVV-------------------

Query:  ---------------------SQGYNQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGIS
                             SQGY+QGHSDHTLFTK SKTGKIAILIVY+DDIVLTGDDQT+ISQLKQ+M DEF IKDL NLKYFLG+EVARSKEG S
Subjt:  ---------------------SQGYNQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGIS

TYK06119.1 Beta-galactosidase [Cucumis melo var. makuwa]1.6e-6670.71Show/hide
Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYV--------------------
        MEE++ALEKN+TWEICALPK HK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFS VAKLN V VLL V                    
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYV--------------------

Query:  -----------------VSQGYNQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGISVS
                         +SQGY+QGHSDHTLFTK SKTGKI ILIVY+DDIVLT DDQT+ISQLKQ+M DEF IKDL NLKYFLGMEVARSKEGI VS
Subjt:  -----------------VSQGYNQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGISVS

TrEMBL top hitse value%identityAlignment
A0A5A7U468 Reverse transcriptase5.4e-6883.33Show/hide
Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYV-VSQGYNQGHSDHTLFTKVS
        MEE++ LEKNKTWEIC LPK HK VGCKW+FSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFS VAKLN V VLL V +++GY+QGHS HTLFTKV 
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYV-VSQGYNQGHSDHTLFTKVS

Query:  KTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGISVS
        K  KI ILIVY+DDIVLTGDDQT+ISQLKQ+M DEF IKDL NLKYFLGMEVARSKEGISVS
Subjt:  KTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGISVS

A0A5A7UJI9 Beta-galactosidase1.4e-6870.79Show/hide
Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLL----------------------
        MEEI+ALEKN+TWEICALPK HK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFS VAKLN V VLL                      
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLL----------------------

Query:  -------------------YVVSQGYNQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGIS
                           +V SQGY+QGHSDHTLFTK SKTGKIAILI+Y+DDIVLTGDDQT+ISQLKQ+M DEF IKDL NLKYFLGMEVARSKEGIS
Subjt:  -------------------YVVSQGYNQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGIS

Query:  VS
        VS
Subjt:  VS

A0A5A7VND8 Retrovirus-related Pol polyprotein from transposon TNT 1-942.3e-6669.85Show/hide
Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVV-------------------
        +EE++ALEKN+TWEICALPKRHK VGCKWVFSLKYKADG LDRHKARLVAKGFTQTYGIDYSETFS VAKLNIV VLL V                    
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVV-------------------

Query:  ---------------------SQGYNQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGIS
                             SQGY+QGHSDHTLFTK SKTGKIAILIVY+DDIVLTGDDQT+ISQLKQ+M DEF IKDL NLKYFLG+EVARSKEG S
Subjt:  ---------------------SQGYNQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGIS

A0A5D3C6W4 Beta-galactosidase7.8e-6770.71Show/hide
Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYV--------------------
        MEE++ALEKN+TWEICALPK HK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFS VAKLN V VLL V                    
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYV--------------------

Query:  -----------------VSQGYNQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGISVS
                         +SQGY+QGHSDHTLFTK SKTGKI ILIVY+DDIVLT DDQT+ISQLKQ+M DEF IKDL NLKYFLGMEVARSKEGI VS
Subjt:  -----------------VSQGYNQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGISVS

A0A5D3D271 Myosin-9 isoform X22.9e-6671.94Show/hide
Query:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYV--------------------
        MEE++ALEKN+TWEICALPK HK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFS VAKLN V VLL V                    
Subjt:  MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYV--------------------

Query:  --VSQGY-------------NQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGISVS
          V + Y             +QGHSDHTLFTK SKTGKIAILIVY+DDIVLTGDDQT+ISQLKQ+M DEF IKDL NLKYFLGMEVARSKEGISVS
Subjt:  --VSQGY-------------NQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGISVS

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.8e-1247.62Show/hide
Query:  EIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVSQGYN
        E+ A + N TW I   P+    V  +WVFS+KY   G   R+KARLVA+GFTQ Y IDY ETF+ VA+++    +L +V Q YN
Subjt:  EIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVSQGYN

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-1828.38Show/hide
Query:  EEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLL-----------------------
        EE+E+L+KN T+++  LPK  + + CKWVF LK   D  L R+KARLV KGF Q  GID+ E FS V K+  +  +L                       
Subjt:  EEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLL-----------------------

Query:  ---------------------------------------------YVVSQGYNQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSD
                                                     ++ SQ Y + +SD  ++ K        IL++Y+DD+++ G D+  I++LK  +S 
Subjt:  ---------------------------------------------YVVSQGYNQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSD

Query:  EFAIKDLENLKYFLGMEVARSK
         F +KDL   +  LGM++ R +
Subjt:  EFAIKDLENLKYFLGMEVARSK

P92520 Uncharacterized mitochondrial protein AtMg008206.6e-1550Show/hide
Query:  EEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVSQ
        EE++AL +NKTW +   P     +GCKWVF  K  +DGTLDR KARLVAKGF Q  GI + ET+S V +   +  +L V  Q
Subjt:  EEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVSQ

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.5e-2231Show/hide
Query:  EIEALEKNKTWEICALPKRHKN-VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLL-----------------------
        EI A   N TW++   P  H   VGC+W+F+ KY +DG+L+R+KARLVAKG+ Q  G+DY+ETFS V K   + ++L                       
Subjt:  EIEALEKNKTWEICALPKRHKN-VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLL-----------------------

Query:  ---------------------------------------------YVVSQGYNQGHSDHTLFTKVSKTGK-IAILIVYIDDIVLTGDDQTKISQLKQKMS
                                                     Y+++ G+    SD +LF  V + GK I  ++VY+DDI++TG+D T +      +S
Subjt:  ---------------------------------------------YVVSQGYNQGHSDHTLFTKVSKTGK-IAILIVYIDDIVLTGDDQTKISQLKQKMS

Query:  DEFAIKDLENLKYFLGMEVARSKEGISVS
          F++KD E L YFLG+E  R   G+ +S
Subjt:  DEFAIKDLENLKYFLGMEVARSKEGISVS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE25.2e-2028.07Show/hide
Query:  EIEALEKNKTWEICALPKRHKN-VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLL-----------------------
        EI A   N TW++   P      VGC+W+F+ K+ +DG+L+R+KARLVAKG+ Q  G+DY+ETFS V K   + ++L                       
Subjt:  EIEALEKNKTWEICALPKRHKN-VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLL-----------------------

Query:  ---------------------------------------------YVVSQGYNQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSD
                                                     Y+++ G+    SD +LF  + +   I  ++VY+DDI++TG+D   +      +S 
Subjt:  ---------------------------------------------YVVSQGYNQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQKMSD

Query:  EFAIKDLENLKYFLGMEVARSKEGISVS
         F++K+ E+L YFLG+E  R  +G+ +S
Subjt:  EFAIKDLENLKYFLGMEVARSKEGISVS

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 87.2e-3333.77Show/hide
Query:  EEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYV---------------------
        +EI A+E   TWEIC LP   K +GCKWV+ +KY +DGT++R+KARLVAKG+TQ  GID+ ETFS V KL  V ++L +                     
Subjt:  EEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYV---------------------

Query:  ---------------------------------------------------VSQGYNQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQ
                                                           +  G+ Q HSDHT F K++ T  + +L VY+DDI++  ++   + +LK 
Subjt:  ---------------------------------------------------VSQGYNQGHSDHTLFTKVSKTGKIAILIVYIDDIVLTGDDQTKISQLKQ

Query:  KMSDEFAIKDLENLKYFLGMEVARSKEGISV
        ++   F ++DL  LKYFLG+E+ARS  GI++
Subjt:  KMSDEFAIKDLENLKYFLGMEVARSKEGISV

ATMG00810.1 DNA/RNA polymerases superfamily protein9.8e-0638.18Show/hide
Query:  LIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGISVS
        L++Y+DDI+LTG   T ++ L  ++S  F++KDL  + YFLG+++     G+ +S
Subjt:  LIVYIDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGISVS

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)4.7e-1650Show/hide
Query:  EEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVSQ
        EE++AL +NKTW +   P     +GCKWVF  K  +DGTLDR KARLVAKGF Q  GI + ET+S V +   +  +L V  Q
Subjt:  EEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGATAGAGGCTCTTGAAAAGAATAAAACTTGGGAGATCTGTGCTCTACCCAAAAGACATAAAAATGTAGGATGCAAATGGGTGTTCTCTCTCAAATACAAAGC
AGATGGTACGCTTGATAGACACAAGGCAAGGTTAGTTGCAAAGGGATTTACTCAGACCTATGGTATTGATTATTCAGAAACCTTTTCTCTAGTTGCTAAGTTGAATATTG
TTATAGTCCTACTATATGTTGTTTCCCAAGGGTACAATCAAGGGCACTCTGACCATACTTTATTTACAAAGGTTTCCAAGACAGGGAAGATTGCTATTCTAATAGTTTAT
ATAGATGACATTGTTTTAACTGGAGATGATCAAACAAAAATCAGTCAACTAAAGCAGAAAATGAGTGATGAATTTGCAATCAAGGATTTGGAAAATCTGAAATATTTCCT
TGGAATGGAGGTGGCCAGATCTAAAGAAGGCATCTCCGTGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGATAGAGGCTCTTGAAAAGAATAAAACTTGGGAGATCTGTGCTCTACCCAAAAGACATAAAAATGTAGGATGCAAATGGGTGTTCTCTCTCAAATACAAAGC
AGATGGTACGCTTGATAGACACAAGGCAAGGTTAGTTGCAAAGGGATTTACTCAGACCTATGGTATTGATTATTCAGAAACCTTTTCTCTAGTTGCTAAGTTGAATATTG
TTATAGTCCTACTATATGTTGTTTCCCAAGGGTACAATCAAGGGCACTCTGACCATACTTTATTTACAAAGGTTTCCAAGACAGGGAAGATTGCTATTCTAATAGTTTAT
ATAGATGACATTGTTTTAACTGGAGATGATCAAACAAAAATCAGTCAACTAAAGCAGAAAATGAGTGATGAATTTGCAATCAAGGATTTGGAAAATCTGAAATATTTCCT
TGGAATGGAGGTGGCCAGATCTAAAGAAGGCATCTCCGTGTCTTAG
Protein sequenceShow/hide protein sequence
MEEIEALEKNKTWEICALPKRHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSLVAKLNIVIVLLYVVSQGYNQGHSDHTLFTKVSKTGKIAILIVY
IDDIVLTGDDQTKISQLKQKMSDEFAIKDLENLKYFLGMEVARSKEGISVS