; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0000084 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0000084
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase
Genome locationchr07:14205918..14208871
RNA-Seq ExpressionPay0000084
SyntenyPay0000084
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0043565 - sequence-specific DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR005162 - Retrotransposon gag domain
IPR001878 - Zinc finger, CCHC-type
IPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031931.1 pol protein [Cucumis melo var. makuwa]0.0e+0079.25Show/hide
Query:  MREQQQPAPPAPAPAPAPAPASAPAPAPVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLTDR
        MREQQQP PPAPAPAPAPAP  APAPA VP APQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWL SLETIFRYMKCPEDQKVQCAVFMLTDR
Subjt:  MREQQQPAPPAPAPAPAPAPASAPAPAPVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLTDR

Query:  GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL---
        GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLV     
Subjt:  GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL---

Query:  ---SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFGTR
           +D L + +  + Q          RG T         +P+   Q   R G    R     F+         AGEAARGKPLCTTCGKHHLGRCLFGTR
Subjt:  ---SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFGTR

Query:  TCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV--------------------------------------------------
        TCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV                                                  
Subjt:  TCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV--------------------------------------------------

Query:  -------------------------------------------------------------------------------VISAIRASKLLSQGTWGILAS
                                                                                       VISAIRASKLLSQGTWGILAS
Subjt:  -------------------------------------------------------------------------------VISAIRASKLLSQGTWGILAS

Query:  VVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        VVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMR
Subjt:  VVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIA
        FIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIA
Subjt:  FIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIA

Query:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH
         PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH
Subjt:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH

Query:  YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG
        YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG
Subjt:  YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG

KAA0040689.1 pol protein [Cucumis melo var. makuwa]0.0e+0080.86Show/hide
Query:  MREQQQPAPPAPAPAPAPAPASAPAPAPVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLTDR
        MREQQ+PA P PAPAPAP P  APA APVP APQ VPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQ+WL SLETIFRYMKCPEDQKVQCAVFMLTDR
Subjt:  MREQQQPAPPAPAPAPAPAPASAPAPAPVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLTDR

Query:  GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL---
        GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNL+QGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLV     
Subjt:  GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL---

Query:  ---SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFGTR
           +D L + +  + Q          RG T         +P+   Q   R G    R     F+         AGEAARGKPLCTTCGKHHLGRCLFGTR
Subjt:  ---SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFGTR

Query:  TCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV--------------------------------------------------
        TCFKCRQEGHTADRCPLRLTGNAQNQ AGAPHQGRVFATNKTEAE+AGTV                                                  
Subjt:  TCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV--------------------------------------------------

Query:  -----------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLP
                                                       VISAIRASKLLSQGT GILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLP
Subjt:  -----------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLP

Query:  PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA
        PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA
Subjt:  PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA

Query:  TVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLY
        TVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLY
Subjt:  TVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLY

Query:  AKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVT
        AKFSKCEFWLKQVSFLGHVVSKAGVSVDP KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVT
Subjt:  AKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVT

Query:  APVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRW
        APVL VPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRW
Subjt:  APVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRW

Query:  LELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG
        LELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG
Subjt:  LELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG

KAA0048687.1 pol protein [Cucumis melo var. makuwa]0.0e+0081Show/hide
Query:  MREQQQPAPPAPAPAPAPAPASAPAP--APVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLT
        MREQQ+PA P PAPAPAPAPA APAP  APVP APQ VPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQ+WL SLETIFRYMKCPEDQKVQCAVFMLT
Subjt:  MREQQQPAPPAPAPAPAPAPASAPAP--APVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLT

Query:  DRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL-
        DRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLV   
Subjt:  DRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL-

Query:  -----SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFG
             +D L + +  + Q          RGLT         +P+   Q   R G    R     F+         AGEAAR KPLCT CGKHHLGRCLFG
Subjt:  -----SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFG

Query:  TRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV------------------------------------------------
        TRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAE+AGTV                                                
Subjt:  TRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV------------------------------------------------

Query:  ------------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFP
                                                              VISAIRASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFP
Subjt:  ------------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFP

Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
        EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT
        FDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQT
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN
        LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKEL
        LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKEL
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKEL

Query:  NMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG
        NMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG
Subjt:  NMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG

KAA0053357.1 gag protease polyprotein [Cucumis melo var. makuwa]0.0e+0080.62Show/hide
Query:  MREQQQPAPPAPAPAPAPAPASAPAPAPVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLTDR
        MREQQQPAPPAPAPAPAPAP  APAPAPVP  P+VVPDQLSAEAKHLRDFRKYNPTT+DGSLEDPTRAQLWL SLETIFRY+KCPEDQKVQC VFMLTDR
Subjt:  MREQQQPAPPAPAPAPAPAPASAPAPAPVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLTDR

Query:  GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL---
        GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLV     
Subjt:  GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL---

Query:  ---SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFGTR
           +D L + +  + Q          RG T         +P+   Q   R G    R     F+         AGEAARGKPLCTTCGKHHLGRCLFGTR
Subjt:  ---SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFGTR

Query:  TCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV--------------------------------------------------
        TCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNK EAERAGTV                                                  
Subjt:  TCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV--------------------------------------------------

Query:  ---------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEEL
                                                           VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEEL
Subjt:  ---------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEEL

Query:  PGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQ
        PGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPS+SPWGAP+LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQ
Subjt:  PGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQ

Query:  LQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRD
        LQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRD
Subjt:  LQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRD

Query:  NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQ
        NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK EAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQ
Subjt:  NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQ

Query:  KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR
        KLVTAPVLTVPDGSGSFVIYSDASKKGLGC LMQQGKVVAY SRQLKSHEQNYPTHDLELA VVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR
Subjt:  KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR

Query:  QRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG
        QRRWL+LVKDYDCEILYHPGKANVVAD LSRKVSHSAALITRQAPLHRDLERAEIAVSVG
Subjt:  QRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG

TYK01613.1 pol protein [Cucumis melo var. makuwa]0.0e+0078.9Show/hide
Query:  MREQQQPA--PPAPAPAPAPAPASAPAPAPVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLT
        MREQQ+PA   PAPAPAPAPAP  APAPAPVP APQ VPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQ+WL SLETIFRYMKCPEDQKVQCAVFMLT
Subjt:  MREQQQPA--PPAPAPAPAPAPASAPAPAPVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLT

Query:  DRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL-
        DRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLV   
Subjt:  DRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL-

Query:  -----SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRGRLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFGTRTC
             +D L + +  + Q          RG T         +P+   Q   R G    S  Q         AGEAARGKPLCTTCGKHHLGRCLFGTRTC
Subjt:  -----SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRGRLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFGTRTC

Query:  FKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV----------------------------------------------------
        FKCRQEGHTADRCPLRLTG AQNQGAGAPHQGRVFATN+TEAE+AGTV                                                    
Subjt:  FKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV----------------------------------------------------

Query:  -----------------------------------------------------------------------------VISAIRASKLLSQGTWGILASVV
                                                                                     VISAIRASKLLSQGTWGILASVV
Subjt:  -----------------------------------------------------------------------------VISAIRASKLLSQGTWGILASVV

Query:  DTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
        DTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
Subjt:  DTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC

Query:  IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFI
        IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFI
Subjt:  IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFI

Query:  DDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATP
        DDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATP
Subjt:  DDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATP

Query:  LTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL
        LTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL
Subjt:  LTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL

Query:  YGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG
        YGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG
Subjt:  YGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG

TrEMBL top hitse value%identityAlignment
A0A5A7SQU8 Reverse transcriptase0.0e+0079.25Show/hide
Query:  MREQQQPAPPAPAPAPAPAPASAPAPAPVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLTDR
        MREQQQP PPAPAPAPAPAP  APAPA VP APQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWL SLETIFRYMKCPEDQKVQCAVFMLTDR
Subjt:  MREQQQPAPPAPAPAPAPAPASAPAPAPVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLTDR

Query:  GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL---
        GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLV     
Subjt:  GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL---

Query:  ---SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFGTR
           +D L + +  + Q          RG T         +P+   Q   R G    R     F+         AGEAARGKPLCTTCGKHHLGRCLFGTR
Subjt:  ---SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFGTR

Query:  TCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV--------------------------------------------------
        TCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV                                                  
Subjt:  TCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV--------------------------------------------------

Query:  -------------------------------------------------------------------------------VISAIRASKLLSQGTWGILAS
                                                                                       VISAIRASKLLSQGTWGILAS
Subjt:  -------------------------------------------------------------------------------VISAIRASKLLSQGTWGILAS

Query:  VVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        VVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMR
Subjt:  VVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
        LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
Subjt:  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV

Query:  FIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIA
        FIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIA
Subjt:  FIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIA

Query:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH
         PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH
Subjt:  TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH

Query:  YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG
        YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG
Subjt:  YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG

A0A5A7THE6 Reverse transcriptase0.0e+0080.86Show/hide
Query:  MREQQQPAPPAPAPAPAPAPASAPAPAPVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLTDR
        MREQQ+PA P PAPAPAP P  APA APVP APQ VPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQ+WL SLETIFRYMKCPEDQKVQCAVFMLTDR
Subjt:  MREQQQPAPPAPAPAPAPAPASAPAPAPVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLTDR

Query:  GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL---
        GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNL+QGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLV     
Subjt:  GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL---

Query:  ---SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFGTR
           +D L + +  + Q          RG T         +P+   Q   R G    R     F+         AGEAARGKPLCTTCGKHHLGRCLFGTR
Subjt:  ---SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFGTR

Query:  TCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV--------------------------------------------------
        TCFKCRQEGHTADRCPLRLTGNAQNQ AGAPHQGRVFATNKTEAE+AGTV                                                  
Subjt:  TCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV--------------------------------------------------

Query:  -----------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLP
                                                       VISAIRASKLLSQGT GILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLP
Subjt:  -----------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLP

Query:  PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA
        PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA
Subjt:  PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA

Query:  TVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLY
        TVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLY
Subjt:  TVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLY

Query:  AKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVT
        AKFSKCEFWLKQVSFLGHVVSKAGVSVDP KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVT
Subjt:  AKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVT

Query:  APVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRW
        APVL VPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRW
Subjt:  APVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRW

Query:  LELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG
        LELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG
Subjt:  LELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG

A0A5A7U330 Reverse transcriptase0.0e+0081Show/hide
Query:  MREQQQPAPPAPAPAPAPAPASAPAP--APVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLT
        MREQQ+PA P PAPAPAPAPA APAP  APVP APQ VPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQ+WL SLETIFRYMKCPEDQKVQCAVFMLT
Subjt:  MREQQQPAPPAPAPAPAPAPASAPAP--APVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLT

Query:  DRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL-
        DRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLV   
Subjt:  DRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL-

Query:  -----SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFG
             +D L + +  + Q          RGLT         +P+   Q   R G    R     F+         AGEAAR KPLCT CGKHHLGRCLFG
Subjt:  -----SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFG

Query:  TRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV------------------------------------------------
        TRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAE+AGTV                                                
Subjt:  TRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV------------------------------------------------

Query:  ------------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFP
                                                              VISAIRASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFP
Subjt:  ------------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFP

Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
        EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT
        FDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQT
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN
        LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKEL
        LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKEL
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKEL

Query:  NMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG
        NMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG
Subjt:  NMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG

A0A5A7UFS9 Reverse transcriptase0.0e+0080.62Show/hide
Query:  MREQQQPAPPAPAPAPAPAPASAPAPAPVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLTDR
        MREQQQPAPPAPAPAPAPAP  APAPAPVP  P+VVPDQLSAEAKHLRDFRKYNPTT+DGSLEDPTRAQLWL SLETIFRY+KCPEDQKVQC VFMLTDR
Subjt:  MREQQQPAPPAPAPAPAPAPASAPAPAPVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLTDR

Query:  GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL---
        GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLV     
Subjt:  GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL---

Query:  ---SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFGTR
           +D L + +  + Q          RG T         +P+   Q   R G    R     F+         AGEAARGKPLCTTCGKHHLGRCLFGTR
Subjt:  ---SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFGTR

Query:  TCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV--------------------------------------------------
        TCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNK EAERAGTV                                                  
Subjt:  TCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV--------------------------------------------------

Query:  ---------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEEL
                                                           VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEEL
Subjt:  ---------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEEL

Query:  PGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQ
        PGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPS+SPWGAP+LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQ
Subjt:  PGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQ

Query:  LQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRD
        LQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRD
Subjt:  LQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRD

Query:  NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQ
        NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK EAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQ
Subjt:  NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQ

Query:  KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR
        KLVTAPVLTVPDGSGSFVIYSDASKKGLGC LMQQGKVVAY SRQLKSHEQNYPTHDLELA VVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR
Subjt:  KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR

Query:  QRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG
        QRRWL+LVKDYDCEILYHPGKANVVAD LSRKVSHSAALITRQAPLHRDLERAEIAVSVG
Subjt:  QRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG

A0A5D3BPI1 Reverse transcriptase0.0e+0078.9Show/hide
Query:  MREQQQPA--PPAPAPAPAPAPASAPAPAPVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLT
        MREQQ+PA   PAPAPAPAPAP  APAPAPVP APQ VPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQ+WL SLETIFRYMKCPEDQKVQCAVFMLT
Subjt:  MREQQQPA--PPAPAPAPAPAPASAPAPAPVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLT

Query:  DRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL-
        DRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLV   
Subjt:  DRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVEL-

Query:  -----SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRGRLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFGTRTC
             +D L + +  + Q          RG T         +P+   Q   R G    S  Q         AGEAARGKPLCTTCGKHHLGRCLFGTRTC
Subjt:  -----SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRGRLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFGTRTC

Query:  FKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV----------------------------------------------------
        FKCRQEGHTADRCPLRLTG AQNQGAGAPHQGRVFATN+TEAE+AGTV                                                    
Subjt:  FKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV----------------------------------------------------

Query:  -----------------------------------------------------------------------------VISAIRASKLLSQGTWGILASVV
                                                                                     VISAIRASKLLSQGTWGILASVV
Subjt:  -----------------------------------------------------------------------------VISAIRASKLLSQGTWGILASVV

Query:  DTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
        DTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
Subjt:  DTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC

Query:  IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFI
        IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFI
Subjt:  IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFI

Query:  DDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATP
        DDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATP
Subjt:  DDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATP

Query:  LTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL
        LTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL
Subjt:  LTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL

Query:  YGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG
        YGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG
Subjt:  YGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVG

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.62.1e-8840.39Show/hide
Query:  YRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI
        Y    A  +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN++TV +R+P+P +D++  +L     F+ IDL  G+HQ+ +
Subjt:  YRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI

Query:  KDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG
            V KTAF +++GHYE++ M FGL NAPA F   MN + R  L+   +V++DDI+++S +  EH + L +V + L    L  +  KCEF  ++ +FLG
Subjt:  KDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG

Query:  HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDS-FQNLKQKLVTAPVLTVPDGSGSFVIY
        HV++  G+  +P KIEA+  +  P+   E+++FLGL GYYR+F+ NF+ IA P+T+  +K      +    DS F+ LK  +   P+L VPD +  F + 
Subjt:  HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDS-FQNLKQKLVTAPVLTVPDGSGSFVIY

Query:  SDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG
        +DAS   LG VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +I +DH+ L + +  K+ N +  RW   + ++D +I Y  G
Subjt:  SDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG

Query:  KANVVADALSR
        K N VADALSR
Subjt:  KANVVADALSR

P0CT34 Transposon Tf2-1 polyprotein1.0e-8237.05Show/hide
Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN
        L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY
        +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS
          T +    N R  RW   ++D++ EI Y PG AN +ADALSR V  +
Subjt:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS

P0CT41 Transposon Tf2-12 polyprotein1.0e-8237.05Show/hide
Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN
        L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY
        +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS
          T +    N R  RW   ++D++ EI Y PG AN +ADALSR V  +
Subjt:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS

P20825 Retrovirus-related Pol polyprotein from transposon 2974.7e-8839.09Show/hide
Query:  PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
        PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   V KK         R+ IDYR+LN++T+ +RYP+P +D++  +L     F+ IDL  G
Subjt:  PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG

Query:  YHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLK
        +HQ+ + +  + KTAF ++ GHYE++ M FGL NAPA F   MN + R  L+   +V++DDI+I+S +  EH   +++V   L D  L  +  KCEF  K
Subjt:  YHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLK

Query:  QVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGS
        + +FLGH+V+  G+  +P K++A+  +  P+   E+R+FLGL GYYR+F+ N++ IA P+T   +K       K    ++F+ LK  ++  P+L +PD  
Subjt:  QVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGS

Query:  GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE
          FV+ +DAS   LG VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHYL G +  I +DH+ L++    KE   +  RW   + +Y  +
Subjt:  GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE

Query:  ILYHPGKANVVADALSR
        I Y  GK N VADALSR
Subjt:  ILYHPGKANVVADALSR

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus8.4e-8536.13Show/hide
Query:  DYPDVFPEELPGLPPHREVEFAIELEPGT---VPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNK
        ++P +F   L G+     VE A++ E  T    PI    Y        E++ Q+ ELL  G IRPS SP+ +P+  V KK     +   R+ +D++ LN 
Subjt:  DYPDVFPEELPGLPPHREVEFAIELEPGT---VPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNK

Query:  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSK
        VT+ + YP+P I+     L  A  F+ +DL SG+HQ+ +K+ D+PKTAF +  G YEF+ + FGL NAPA+F  +++ + RE +     V+IDDI+++S+
Subjt:  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSK

Query:  TEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTR--
            H ++LR+VL +L    L     K  F   QV FLG++V+  G+  DP K+ A++    P++V E++ FLG+  YYR+F+++++++A PLT LTR  
Subjt:  TEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTR--

Query:  ---------KGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ----QGKVVAYASRQLKSHEQNYPTHDLELAAVVFAL
                    P    +    SF +LK  L ++ +L  P  +  F + +DAS   +G VL Q    + + +AY SR L   E+NY T + E+ A++++L
Subjt:  ---------KGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ----QGKVVAYASRQLKSHEQNYPTHDLELAAVVFAL

Query:  KIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
           R YLYG   I+++TDH+ L +    +  N + +RW   +++Y+CE++Y PGK+NVVADALSR
Subjt:  KIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein4.8e-2745.04Show/hide
Query:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGGAGCAGCAGCAGCCTGCCCCGCCAGCTCCAGCACCAGCTCCTGCACCAGCTCCTGCTTCTGCTCCAGCTCCGGCTCCAGTACCAGCTGCGCCCCAGGTTGTGCC
GGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACATTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGCTGTGGTTATGGT
CTTTGGAGACCATATTCCGATACATGAAGTGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTCATGTTGACAGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGA
ATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAACAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTTTGAGAGATGCCAAGCGGCAGGAGTTCCTGAA
CTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTG
TTAGAGGCCTCCGACTGGACATTCAGGGTTTGGTCGAGCTTTCCGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACT
CGTCTAAGACCGCTGGTAGAGGTTCAACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAACTTCAGATCAGGTGGCAGGGGAAGCTGC
CAGAGGGAAGCCGTTGTGTACCACTTGTGGAAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACTTGCTTTAAGTGTAGGCAAGAGGGTCATACAGCTGATAGAT
GCCCGTTGAGACTTACGGGGAACGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGGGTCTTTGCTACCAACAAGACTGAGGCTGAGAGGGCAGGCACGGTGGTA
ATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCATCAGAACCGGTGGT
GAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCC
CTTACAGAATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTA
TTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGA
CCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCAAAGACAGCATTTCGTTCCAGGTATG
GACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTG
TTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAA
ATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTT
CCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGA
GCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGAT
TTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACAC
ATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTT
ACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCT
TAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGCAGTCACTATGCAGTT
AG
mRNA sequenceShow/hide mRNA sequence
ATGCGGGAGCAGCAGCAGCCTGCCCCGCCAGCTCCAGCACCAGCTCCTGCACCAGCTCCTGCTTCTGCTCCAGCTCCGGCTCCAGTACCAGCTGCGCCCCAGGTTGTGCC
GGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACATTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGCTGTGGTTATGGT
CTTTGGAGACCATATTCCGATACATGAAGTGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTCATGTTGACAGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGA
ATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAACAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTTTGAGAGATGCCAAGCGGCAGGAGTTCCTGAA
CTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTG
TTAGAGGCCTCCGACTGGACATTCAGGGTTTGGTCGAGCTTTCCGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACT
CGTCTAAGACCGCTGGTAGAGGTTCAACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAACTTCAGATCAGGTGGCAGGGGAAGCTGC
CAGAGGGAAGCCGTTGTGTACCACTTGTGGAAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACTTGCTTTAAGTGTAGGCAAGAGGGTCATACAGCTGATAGAT
GCCCGTTGAGACTTACGGGGAACGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGGGTCTTTGCTACCAACAAGACTGAGGCTGAGAGGGCAGGCACGGTGGTA
ATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCATCAGAACCGGTGGT
GAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCC
CTTACAGAATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTA
TTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGA
CCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCAAAGACAGCATTTCGTTCCAGGTATG
GACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTG
TTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAA
ATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTT
CCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGA
GCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGAT
TTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACAC
ATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTT
ACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCT
TAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGCAGTCACTATGCAGTT
AG
Protein sequenceShow/hide protein sequence
MREQQQPAPPAPAPAPAPAPASAPAPAPVPAAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLWSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTER
MLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVELSDPLLMPMHCAWQWISVYRRGLT
RLRPLVEVQHRDRRGRLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVV
ISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVL
FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIV
FIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKG
APFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGQSLCS