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Pay0000121 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0000121
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotransposon protein
Genome locationchr06:26638200..26638953
RNA-Seq ExpressionPay0000121
SyntenyPay0000121
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR027806 - Harbinger transposase-derived nuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050107.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.4e-8785.71Show/hide
Query:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV
        MLRT+GGLE TQYVDVEEMVAIF HIVAHDVKNRVARRHFARSGET+SRHFNAV NAVLRLHEI LKQPDPVTHSCSHEK++WFQNCL AL GTHIKVNV
Subjt:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV

Query:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVV----SLKVQKGYYYLCDAGYPNAEGFLPLYRGQRYYLTE
        SM DRPRYRSRKGDIT NV GV SQNGEFIFVMP W GS S SRVLRD V    SLKV KGYYYLCDAGYPNAEGFL  YRGQRY+LTE
Subjt:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVV----SLKVQKGYYYLCDAGYPNAEGFLPLYRGQRYYLTE

KAA0060652.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.8e-9999.44Show/hide
Query:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV
        MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV
Subjt:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV

Query:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQK-GYYYLCDAGYPNAEGFLPLYR
        SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQK GYYYLCDAGYPNAEGFLPLYR
Subjt:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQK-GYYYLCDAGYPNAEGFLPLYR

KAA0065306.1 retrotransposon protein [Cucumis melo var. makuwa]3.6e-8983.25Show/hide
Query:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV
        MLRT+GGLE TQYVDVEEM+AIF HIVAHDVKNRV RRHFARSGET+SRH    FNAVLRLHEI LKQPDPVT+SCSHEKW+WFQ CL ALDGTHIKVNV
Subjt:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV

Query:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVS----LKVQKGYYYLCDAGYPNAEGFLPLYRGQRYYLTEWRGGNPPK
        SM DRPRYRSRKGDIT NV GV  QNGEFIFVMP W GS S SRVLRD VS    LKV KGYYYLCDAGYPNAEGFL  YRGQRY+LTEWRGGNPPK
Subjt:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVS----LKVQKGYYYLCDAGYPNAEGFLPLYRGQRYYLTEWRGGNPPK

TYK02222.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.6e-100100Show/hide
Query:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV
        MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV
Subjt:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV

Query:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQKGYYYLCDAGYPNAEGFLPLYR
        SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQKGYYYLCDAGYPNAEGFLPLYR
Subjt:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQKGYYYLCDAGYPNAEGFLPLYR

XP_008452358.1 PREDICTED: uncharacterized protein LOC103493418 [Cucumis melo]5.2e-112100Show/hide
Query:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV
        MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV
Subjt:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV

Query:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQKGYYYLCDAGYPNAEGFLPLYRGQRYYLTEWRGGNPPK
        SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQKGYYYLCDAGYPNAEGFLPLYRGQRYYLTEWRGGNPPK
Subjt:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQKGYYYLCDAGYPNAEGFLPLYRGQRYYLTEWRGGNPPK

TrEMBL top hitse value%identityAlignment
A0A1S3BTL5 uncharacterized protein LOC1034934182.5e-112100Show/hide
Query:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV
        MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV
Subjt:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV

Query:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQKGYYYLCDAGYPNAEGFLPLYRGQRYYLTEWRGGNPPK
        SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQKGYYYLCDAGYPNAEGFLPLYRGQRYYLTEWRGGNPPK
Subjt:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQKGYYYLCDAGYPNAEGFLPLYRGQRYYLTEWRGGNPPK

A0A5A7U6W3 Putative nuclease HARBI11.6e-8785.71Show/hide
Query:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV
        MLRT+GGLE TQYVDVEEMVAIF HIVAHDVKNRVARRHFARSGET+SRHFNAV NAVLRLHEI LKQPDPVTHSCSHEK++WFQNCL AL GTHIKVNV
Subjt:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV

Query:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVV----SLKVQKGYYYLCDAGYPNAEGFLPLYRGQRYYLTE
        SM DRPRYRSRKGDIT NV GV SQNGEFIFVMP W GS S SRVLRD V    SLKV KGYYYLCDAGYPNAEGFL  YRGQRY+LTE
Subjt:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVV----SLKVQKGYYYLCDAGYPNAEGFLPLYRGQRYYLTE

A0A5A7UXQ6 Putative nuclease HARBI11.9e-9999.44Show/hide
Query:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV
        MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV
Subjt:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV

Query:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQK-GYYYLCDAGYPNAEGFLPLYR
        SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQK GYYYLCDAGYPNAEGFLPLYR
Subjt:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQK-GYYYLCDAGYPNAEGFLPLYR

A0A5A7VG45 Retrotransposon protein1.7e-8983.25Show/hide
Query:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV
        MLRT+GGLE TQYVDVEEM+AIF HIVAHDVKNRV RRHFARSGET+SRH    FNAVLRLHEI LKQPDPVT+SCSHEKW+WFQ CL ALDGTHIKVNV
Subjt:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV

Query:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVS----LKVQKGYYYLCDAGYPNAEGFLPLYRGQRYYLTEWRGGNPPK
        SM DRPRYRSRKGDIT NV GV  QNGEFIFVMP W GS S SRVLRD VS    LKV KGYYYLCDAGYPNAEGFL  YRGQRY+LTEWRGGNPPK
Subjt:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVS----LKVQKGYYYLCDAGYPNAEGFLPLYRGQRYYLTEWRGGNPPK

A0A5D3BTU3 Putative nuclease HARBI17.5e-101100Show/hide
Query:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV
        MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV
Subjt:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV

Query:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQKGYYYLCDAGYPNAEGFLPLYR
        SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQKGYYYLCDAGYPNAEGFLPLYR
Subjt:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQKGYYYLCDAGYPNAEGFLPLYR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein2.5e-1627.62Show/hide
Query:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPD-------PVTHSCSHEKWQWFQNCLDALDG
        ML+T   L+ T  + +EE VA+F  I  H+   R     F R+ ET+ R F  V  A   L   +++ P        P         W +F   + A+DG
Subjt:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPD-------PVTHSCSHEKWQWFQNCLDALDG

Query:  THIKVNVSMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLR-----DVVSLKVQKGYYYLCDAGYPNAEGFLPLYRGQ-----RYYL
        TH+ V V    +  Y +R  + + N+  +      F ++     GS   + VL+     D          YYL D+GYPN +G L  YR       RY++
Subjt:  THIKVNVSMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLR-----DVVSLKVQKGYYYLCDAGYPNAEGFLPLYRGQ-----RYYL

Query:  TEWRGGNPPK
        +++  G  P+
Subjt:  TEWRGGNPPK

AT5G28730.1 unknown protein5.3e-0627.47Show/hide
Query:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV
        +L  + GL+++  + ++E VAIF  I A +   R     F  + ET+ R F+ V  A+ RL   +++ P  V      E+ +   N L   D T      
Subjt:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV

Query:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVS-----LKVQKGYYYLCDAGYPNAEGFLPLYR
             P      G  + NV  +   +  F +      GST  +RVL   +S            YYL D+GY N  G+L  YR
Subjt:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVS-----LKVQKGYYYLCDAGYPNAEGFLPLYR

AT5G28950.1 unknown protein3.5e-1038.03Show/hide
Query:  WQWFQNCLDALDGTHIKVNVSMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVS
        + +F++C+ A+D THI   VS    P +R+RKGDI++N+    + + EF++V+  W GS   S+VL D ++
Subjt:  WQWFQNCLDALDGTHIKVNVSMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVS

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)8.4e-2835.71Show/hide
Query:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV
        +L+TRG L  T  + +E  +AIF  I+ H+++ R  +  F  SGET+SRHFN V NAV+ + + F  QP+  + +  ++   +F++C+  +D  HI V V
Subjt:  MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNV

Query:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVS----LKVQKGYYYLCDAGYPNAEGFLPLYRG
         + ++  +R+  G +T+NV   SS +  F +V+  W GS S  +VL   ++    L+V +G YY+ D  YPN  GF+  Y G
Subjt:  SMIDRPRYRSRKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVS----LKVQKGYYYLCDAGYPNAEGFLPLYRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAGAACAAGAGGGGGATTGGAAACCACTCAATATGTGGATGTTGAAGAGATGGTTGCAATTTTCTTCCATATTGTAGCACACGATGTTAAGAATAGGGTAGCTCG
ACGACATTTTGCAAGGTCTGGTGAAACAATGTCAAGACACTTCAACGCTGTTTTTAATGCAGTTCTTAGACTCCATGAAATCTTTCTTAAGCAACCTGATCCAGTGACCC
ATTCATGTTCGCACGAGAAGTGGCAATGGTTTCAAAATTGTCTAGATGCATTAGATGGTACACACATCAAAGTGAATGTAAGCATGATTGATCGTCCAAGGTATAGGTCT
AGAAAGGGTGACATTACAAAAAATGTACATGGTGTGAGTTCGCAAAATGGTGAGTTCATATTTGTCATGCCTAGATGGGGAGGGTCTACATCCTATTCGAGGGTACTTAG
AGATGTAGTGTCACTAAAAGTTCAAAAGGGTTACTACTACTTATGTGATGCTGGTTATCCAAATGCTGAAGGATTTCTCCCTCTATACCGAGGTCAACGTTACTATTTAA
CTGAATGGCGTGGAGGAAACCCACCAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAAGAACAAGAGGGGGATTGGAAACCACTCAATATGTGGATGTTGAAGAGATGGTTGCAATTTTCTTCCATATTGTAGCACACGATGTTAAGAATAGGGTAGCTCG
ACGACATTTTGCAAGGTCTGGTGAAACAATGTCAAGACACTTCAACGCTGTTTTTAATGCAGTTCTTAGACTCCATGAAATCTTTCTTAAGCAACCTGATCCAGTGACCC
ATTCATGTTCGCACGAGAAGTGGCAATGGTTTCAAAATTGTCTAGATGCATTAGATGGTACACACATCAAAGTGAATGTAAGCATGATTGATCGTCCAAGGTATAGGTCT
AGAAAGGGTGACATTACAAAAAATGTACATGGTGTGAGTTCGCAAAATGGTGAGTTCATATTTGTCATGCCTAGATGGGGAGGGTCTACATCCTATTCGAGGGTACTTAG
AGATGTAGTGTCACTAAAAGTTCAAAAGGGTTACTACTACTTATGTGATGCTGGTTATCCAAATGCTGAAGGATTTCTCCCTCTATACCGAGGTCAACGTTACTATTTAA
CTGAATGGCGTGGAGGAAACCCACCAAAATGA
Protein sequenceShow/hide protein sequence
MLRTRGGLETTQYVDVEEMVAIFFHIVAHDVKNRVARRHFARSGETMSRHFNAVFNAVLRLHEIFLKQPDPVTHSCSHEKWQWFQNCLDALDGTHIKVNVSMIDRPRYRS
RKGDITKNVHGVSSQNGEFIFVMPRWGGSTSYSRVLRDVVSLKVQKGYYYLCDAGYPNAEGFLPLYRGQRYYLTEWRGGNPPK