| GenBank top hits | e value | %identity | Alignment |
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| CAN82978.1 hypothetical protein VITISV_023328 [Vitis vinifera] | 2.9e-56 | 57.6 | Show/hide |
Query: KSIIEKGHNFRIATNKSINT---EIQVILHDIYAENMTLSESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELVVQLGIEEKNKKAEK----------
K I+ K +F++ +K++ + E+QVILH+I++E M+L++SFQVA++IEKLPP WK+FKNYLKHKRKE+ LEEL+V+L IEE N+K EK
Subjt: KSIIEKGHNFRIATNKSINT---EIQVILHDIYAENMTLSESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELVVQLGIEEKNKKAEK----------
Query: -----CIMDKCNMVGNSKEWWVDTGAT---------------LSNGKQLFMGNSFTSKVEGQGKVILKMTSSKELTLNNVLYVPNIRKNLVFGSLLSKNG
++ +CN+VGN+KEWWVDTGAT + ++LFMG S +SKVEG+GKVILKMTS KELTLN+VL+VP+IRKNLV SLLSKNG
Subjt: -----CIMDKCNMVGNSKEWWVDTGAT---------------LSNGKQLFMGNSFTSKVEGQGKVILKMTSSKELTLNNVLYVPNIRKNLVFGSLLSKNG
Query: FKLVFVSDKFVLSKNEM
FKLVFVSDKFVL+KNEM
Subjt: FKLVFVSDKFVLSKNEM
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| KAA0036703.1 pol polyprotein [Cucumis melo var. makuwa] | 2.3e-53 | 56.28 | Show/hide |
Query: IEKGHNFRIATNKSINTEIQVILHDIYAE--NMTLSESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELVVQLGIEEKNKKAEKCIMD----------
++ N + K TE+ I + + + +S VASIIEKLPPSWK+FKNYLK+KRKEIKLEELVV+LGIEE N+KAEKCI+D
Subjt: IEKGHNFRIATNKSINTEIQVILHDIYAE--NMTLSESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELVVQLGIEEKNKKAEKCIMD----------
Query: ------------------------KCNMVGNSKEWWVDTGAT---------------LSNGKQLFMGNSFTSKVEGQGKVILKMTSSKELTLNNVLYVPN
+CNMV NSKEWWVDTGAT +SNG+QLFMGN SKVEGQGKVILKMTS KELTLNNV +VP+
Subjt: ------------------------KCNMVGNSKEWWVDTGAT---------------LSNGKQLFMGNSFTSKVEGQGKVILKMTSSKELTLNNVLYVPN
Query: IRKNLVFGSLLSKNGFKLVFVSDKFVLSKNE
IRKNLV GSLLSKNGFKLVFVSDKFVLSKNE
Subjt: IRKNLVFGSLLSKNGFKLVFVSDKFVLSKNE
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| KAA0042920.1 pol polyprotein [Cucumis melo var. makuwa] | 7.0e-50 | 51.39 | Show/hide |
Query: ESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELVVQLGIEEKNKKAEKCIMD----------------------------------------------
+S VASIIEKLPPSWK+FKNYLKHKRKEIKLEELVV+LGIEE N+KAEKCI+D
Subjt: ESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELVVQLGIEEKNKKAEKCIMD----------------------------------------------
Query: -------------------------------------------KCNMVGNSKEWWVDTGAT---------------LSNGKQLFMGNSFTSKVEGQGKVI
+CNMVGNSKEWWVDTGAT +SNG+QLFMGNSFTSKV+ QGKVI
Subjt: -------------------------------------------KCNMVGNSKEWWVDTGAT---------------LSNGKQLFMGNSFTSKVEGQGKVI
Query: LKMTSSKELTLNNVLYVPNIRKNLVFGSLLSKNGFKLVFVSDKFVLSKNEM
LKMTS KELTLNNVL+VP+IRKNLV GSLLSKNGFKLVFVSDKFV SKNEM
Subjt: LKMTSSKELTLNNVLYVPNIRKNLVFGSLLSKNGFKLVFVSDKFVLSKNEM
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| RVW42300.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.0e-52 | 56.28 | Show/hide |
Query: KSIIEKGHNFRIATNKSINT---EIQVILHDIYAENMTLSESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELV------VQLGIEEKNKKAE-----
K I+ K +F++ +K++ + E+QVILH+I+ E M+LS+SFQVA++IEKLPP WK+FKNYLKHKRKE+ LEEL+ Q + E +K +
Subjt: KSIIEKGHNFRIATNKSINT---EIQVILHDIYAENMTLSESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELV------VQLGIEEKNKKAE-----
Query: --KCIMDKCNMVGNSKEWWVDTGAT---------------LSNGKQLFMGNSFTSKVEGQGKVILKMTSSKELTLNNVLYVPNIRKNLVFGSLLSKNGFK
++ +CN+VGN+KEWWVDTGAT + ++LFMGNS +SKVEG+GKVILKMTS KELTLN+VL+VP+IRKNLV GSLLSKNGFK
Subjt: --KCIMDKCNMVGNSKEWWVDTGAT---------------LSNGKQLFMGNSFTSKVEGQGKVILKMTSSKELTLNNVLYVPNIRKNLVFGSLLSKNGFK
Query: LVFVSDKFVLSKNEM
LVFVSDKFV +KNEM
Subjt: LVFVSDKFVLSKNEM
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| RVW84499.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 5.4e-50 | 44.79 | Show/hide |
Query: KSIIEKGHNFRIATNKSINT---EIQVILHDIYAENMTLSESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELVVQLGIEEKNKKAEK----------
K I+ K +F++ +K++ + E+QVILH+I++E M+LS+SFQVA++IEKLPP WK+FKNYLKHKRKE+ LEEL+V+L IEE N+K+EK
Subjt: KSIIEKGHNFRIATNKSINT---EIQVILHDIYAENMTLSESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELVVQLGIEEKNKKAEK----------
Query: ----------------------------------------------C------------------------------IMDKCNMVGNSKEWWVDTGAT--
C ++ +CN+VGN+KEWWVDTGAT
Subjt: ----------------------------------------------C------------------------------IMDKCNMVGNSKEWWVDTGAT--
Query: -------------LSNGKQLFMGNSFTSKVEGQGKVILKMTSSKELTLNNVLYVPNIRKNLVFGSLLSKNGFKLVFVSDKFVLSKNEM
+ ++LFMGNS +SKVEG+GKVILKMTS KELTLN+VL+VP+IRKNLV GSLLSKNGFKLVFVSDKFVL+KNEM
Subjt: -------------LSNGKQLFMGNSFTSKVEGQGKVILKMTSSKELTLNNVLYVPNIRKNLVFGSLLSKNGFKLVFVSDKFVLSKNEM
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9G4N1 Uncharacterized protein | 4.7e-52 | 54.75 | Show/hide |
Query: KSIIEKGHNFRIATNKSINT---EIQVILHDIYAENMTLSESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELVVQLGIEEKNKKAEKCIMDK-----
K I+ + ++++ +K++ + E+Q+I H+IYAE MTLSESFQVA+IIEK P SWK FKNYLKHK KEIKLE+L+++L IEE N+ +EK I ++
Subjt: KSIIEKGHNFRIATNKSINT---EIQVILHDIYAENMTLSESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELVVQLGIEEKNKKAEKCIMDK-----
Query: --------------CNMVGNSKEWWVDTGAT---------------LSNGKQLFMGNSFTSKVEGQGKVILKMTSSKELTLNNVLYVPNIRKNLVFGSLL
N+VG++KEWWVDTGAT + +G+QLFMGNS T+KVEG+GKVILKMTS KELTLN+VL+VP+IRKNLV GSLL
Subjt: --------------CNMVGNSKEWWVDTGAT---------------LSNGKQLFMGNSFTSKVEGQGKVILKMTSSKELTLNNVLYVPNIRKNLVFGSLL
Query: SKNGFKLVFVSDKFVLSKNEM
SKNGFKLVF SDKF + M
Subjt: SKNGFKLVFVSDKFVLSKNEM
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| A0A438E3U6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.6e-53 | 56.28 | Show/hide |
Query: KSIIEKGHNFRIATNKSINT---EIQVILHDIYAENMTLSESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELV------VQLGIEEKNKKAE-----
K I+ K +F++ +K++ + E+QVILH+I+ E M+LS+SFQVA++IEKLPP WK+FKNYLKHKRKE+ LEEL+ Q + E +K +
Subjt: KSIIEKGHNFRIATNKSINT---EIQVILHDIYAENMTLSESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELV------VQLGIEEKNKKAE-----
Query: --KCIMDKCNMVGNSKEWWVDTGAT---------------LSNGKQLFMGNSFTSKVEGQGKVILKMTSSKELTLNNVLYVPNIRKNLVFGSLLSKNGFK
++ +CN+VGN+KEWWVDTGAT + ++LFMGNS +SKVEG+GKVILKMTS KELTLN+VL+VP+IRKNLV GSLLSKNGFK
Subjt: --KCIMDKCNMVGNSKEWWVDTGAT---------------LSNGKQLFMGNSFTSKVEGQGKVILKMTSSKELTLNNVLYVPNIRKNLVFGSLLSKNGFK
Query: LVFVSDKFVLSKNEM
LVFVSDKFV +KNEM
Subjt: LVFVSDKFVLSKNEM
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| A0A438HJC7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.6e-50 | 44.79 | Show/hide |
Query: KSIIEKGHNFRIATNKSINT---EIQVILHDIYAENMTLSESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELVVQLGIEEKNKKAEK----------
K I+ K +F++ +K++ + E+QVILH+I++E M+LS+SFQVA++IEKLPP WK+FKNYLKHKRKE+ LEEL+V+L IEE N+K+EK
Subjt: KSIIEKGHNFRIATNKSINT---EIQVILHDIYAENMTLSESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELVVQLGIEEKNKKAEK----------
Query: ----------------------------------------------C------------------------------IMDKCNMVGNSKEWWVDTGAT--
C ++ +CN+VGN+KEWWVDTGAT
Subjt: ----------------------------------------------C------------------------------IMDKCNMVGNSKEWWVDTGAT--
Query: -------------LSNGKQLFMGNSFTSKVEGQGKVILKMTSSKELTLNNVLYVPNIRKNLVFGSLLSKNGFKLVFVSDKFVLSKNEM
+ ++LFMGNS +SKVEG+GKVILKMTS KELTLN+VL+VP+IRKNLV GSLLSKNGFKLVFVSDKFVL+KNEM
Subjt: -------------LSNGKQLFMGNSFTSKVEGQGKVILKMTSSKELTLNNVLYVPNIRKNLVFGSLLSKNGFKLVFVSDKFVLSKNEM
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| A0A5A7T1C5 Pol polyprotein | 1.1e-53 | 56.28 | Show/hide |
Query: IEKGHNFRIATNKSINTEIQVILHDIYAE--NMTLSESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELVVQLGIEEKNKKAEKCIMD----------
++ N + K TE+ I + + + +S VASIIEKLPPSWK+FKNYLK+KRKEIKLEELVV+LGIEE N+KAEKCI+D
Subjt: IEKGHNFRIATNKSINTEIQVILHDIYAE--NMTLSESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELVVQLGIEEKNKKAEKCIMD----------
Query: ------------------------KCNMVGNSKEWWVDTGAT---------------LSNGKQLFMGNSFTSKVEGQGKVILKMTSSKELTLNNVLYVPN
+CNMV NSKEWWVDTGAT +SNG+QLFMGN SKVEGQGKVILKMTS KELTLNNV +VP+
Subjt: ------------------------KCNMVGNSKEWWVDTGAT---------------LSNGKQLFMGNSFTSKVEGQGKVILKMTSSKELTLNNVLYVPN
Query: IRKNLVFGSLLSKNGFKLVFVSDKFVLSKNE
IRKNLV GSLLSKNGFKLVFVSDKFVLSKNE
Subjt: IRKNLVFGSLLSKNGFKLVFVSDKFVLSKNE
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| A5B994 Integrase catalytic domain-containing protein | 1.4e-56 | 57.6 | Show/hide |
Query: KSIIEKGHNFRIATNKSINT---EIQVILHDIYAENMTLSESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELVVQLGIEEKNKKAEK----------
K I+ K +F++ +K++ + E+QVILH+I++E M+L++SFQVA++IEKLPP WK+FKNYLKHKRKE+ LEEL+V+L IEE N+K EK
Subjt: KSIIEKGHNFRIATNKSINT---EIQVILHDIYAENMTLSESFQVASIIEKLPPSWKNFKNYLKHKRKEIKLEELVVQLGIEEKNKKAEK----------
Query: -----CIMDKCNMVGNSKEWWVDTGAT---------------LSNGKQLFMGNSFTSKVEGQGKVILKMTSSKELTLNNVLYVPNIRKNLVFGSLLSKNG
++ +CN+VGN+KEWWVDTGAT + ++LFMG S +SKVEG+GKVILKMTS KELTLN+VL+VP+IRKNLV SLLSKNG
Subjt: -----CIMDKCNMVGNSKEWWVDTGAT---------------LSNGKQLFMGNSFTSKVEGQGKVILKMTSSKELTLNNVLYVPNIRKNLVFGSLLSKNG
Query: FKLVFVSDKFVLSKNEM
FKLVFVSDKFVL+KNEM
Subjt: FKLVFVSDKFVLSKNEM
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