| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7014295.1 DNA-directed RNA polymerase III subunit RPC8 [Cucurbita argyrosperma subsp. argyrosperma] | 1.8e-100 | 80.89 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
MFYLSRIEHTLRVPPS+L+LPILDAIKGELEKLF+DKVVA LGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP+ GE+IIGKV+ES+ NGLRIS
Subjt: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Query: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILV-EQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQ
LGFFEDIYVP+ L+PS SEF PD NGG+RRWVW Y+ P+DIYE+DEIKF+IHSI+YPAI V +QP ESNSKF MEE+PKE++NVKPFAPMV+TA++D
Subjt: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILV-EQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQ
Query: DGLGPVSWWDGSG--EAEDEVEEDS
DGLGPVSWWDGSG +AE E EEDS
Subjt: DGLGPVSWWDGSG--EAEDEVEEDS
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| XP_004135978.1 DNA-directed RNA polymerase III subunit RPC8 [Cucumis sativus] | 2.0e-120 | 97.35 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Subjt: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Query: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQD
LGFFEDIYVPVELMPSGSEFTPDENNGGR RWVWIYNEVPFDIYESDEIKFK+HSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQD
Subjt: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQD
Query: GLGPVSWWDGSGEA----EDEVEEDS
GLGPVSWWDGSGEA EDEVEEDS
Subjt: GLGPVSWWDGSGEA----EDEVEEDS
|
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| XP_008461408.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1 [Cucumis melo] | 1.1e-121 | 99.11 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Subjt: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Query: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQD
LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQD
Subjt: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQD
Query: GLGPVSWWDGSG--EAEDEVEEDS
GLGPVSWWDGSG EAEDEVEEDS
Subjt: GLGPVSWWDGSG--EAEDEVEEDS
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| XP_023547503.1 DNA-directed RNA polymerase III subunit RPC8 [Cucurbita pepo subsp. pepo] | 1.0e-100 | 80.89 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
MFYLSRIEHTLRVPPS+L+LPILDAIKGELEKLF+DKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP+ GE+IIGKV+ES+ NGLRIS
Subjt: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Query: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILV-EQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQ
LGFFEDIYVP+ L+PS SEF PD NGG+RRWVW Y+ P+DIYE+DEIKF+IHSI+YPAI V +QP ESNSKF MEE+PKE++NVKPFAPMV+TA++D
Subjt: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILV-EQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQ
Query: DGLGPVSWWDGSG--EAEDEVEEDS
DGLGPVSWWDGSG +A+ E EEDS
Subjt: DGLGPVSWWDGSG--EAEDEVEEDS
|
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| XP_038897233.1 DNA-directed RNA polymerase III subunit RPC8 isoform X1 [Benincasa hispida] | 6.1e-101 | 81.9 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
MFYLSRIEHTLRVPP+LL+LPILDAIKGELEKLF+DKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPF GEVIIGKV+ESN GLRIS
Subjt: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Query: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQD
LGFFEDI VPVEL+PSGS+F PD NNGG+ RWVW Y +VP DIYE+DEI+FKIHSI+YPAI VEQPKE +SKF MEE+P+E+INVK FAPM+ITA++D D
Subjt: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQD
Query: GLGPVSWWDGSGEAEDEVEED
GLGP+SWW+G G+ EDEVE +
Subjt: GLGPVSWWDGSGEAEDEVEED
|
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0K846 Uncharacterized protein | 9.8e-121 | 97.35 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Subjt: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Query: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQD
LGFFEDIYVPVELMPSGSEFTPDENNGGR RWVWIYNEVPFDIYESDEIKFK+HSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQD
Subjt: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQD
Query: GLGPVSWWDGSGEA----EDEVEEDS
GLGPVSWWDGSGEA EDEVEEDS
Subjt: GLGPVSWWDGSGEA----EDEVEEDS
|
|
| A0A1S3CEN6 DNA-directed RNA polymerase III subunit RPC8 isoform X1 | 5.2e-122 | 99.11 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Subjt: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Query: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQD
LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQD
Subjt: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQD
Query: GLGPVSWWDGSG--EAEDEVEEDS
GLGPVSWWDGSG EAEDEVEEDS
Subjt: GLGPVSWWDGSG--EAEDEVEEDS
|
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| A0A5A7UWI5 DNA-directed RNA polymerase III subunit RPC8 isoform X1 | 5.2e-122 | 99.11 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Subjt: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Query: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQD
LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQD
Subjt: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQD
Query: GLGPVSWWDGSG--EAEDEVEEDS
GLGPVSWWDGSG EAEDEVEEDS
Subjt: GLGPVSWWDGSG--EAEDEVEEDS
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| A0A6J1GPX5 DNA-directed RNA polymerase III subunit RPC8 | 1.9e-100 | 80.18 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
MFYLSRIEHTLRVPPS+L+LPILDAIKGELEKLF+DKVVA LGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP+ GE+IIGKV+ES+ NGLRIS
Subjt: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Query: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILV-EQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQ
LGFFEDIYVP+ L+PS SEF PD NGG+RRWVW Y+ P+DIYE+DEIKF+IHSI+YPAI V +QP ESNSKF MEE+PKE++NVKPFAPMV+TA++D
Subjt: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILV-EQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQ
Query: DGLGPVSWWDGSG----EAEDEVEEDS
DGLGPVSWWDGSG +AE E EEDS
Subjt: DGLGPVSWWDGSG----EAEDEVEEDS
|
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| A0A6J1JVU8 DNA-directed RNA polymerase III subunit RPC8 | 4.3e-100 | 79.48 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
MFYLSRIEHTLRVPPS+L+LPILDAIKGELEKLF+DKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP+ GE+IIGKV+ES+ NGLRIS
Subjt: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Query: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILV-EQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQ
LGFFEDIYVP+ L+PS SEF PD N G+RRWVW Y+ P+DIYE+DEIKF+IHSI+YP I V +QP ESNSKF MEE+PKE++NVKPFAPMV+TA++D
Subjt: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILV-EQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQ
Query: DGLGPVSWWDGSG------EAEDEVEEDS
DGLGPVSWWDGSG EAE E EEDS
Subjt: DGLGPVSWWDGSG------EAEDEVEEDS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O94285 DNA-directed RNA polymerase III subunit rpc8 | 7.0e-31 | 34.72 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
MF LSR + + PS P +A+ E+ K + +KV+ N+GL I VYD + G I DG++ VVF LI+FRPF GEV++GK++ +E G+R++
Subjt: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Query: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIY--------NEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMV
+ FF+DI++P +++ F PDE R WVW E+ FDI +EI+F+I S ++ I ++ K + + E ++ +P
Subjt: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIY--------NEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMV
Query: ITASLDQDGLGPVSWW
+ AS +DGLG +WW
Subjt: ITASLDQDGLGPVSWW
|
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| P35718 DNA-directed RNA polymerase III subunit RPC8 | 7.7e-30 | 32.73 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
MF LS+I +R+PP + + AI +L F +K++ N+GLCI++YD+ +V+ G + P DG++ V F +VF+PF GE++ G + + G+++S
Subjt: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Query: -LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNE---VPFDIYESDEIKFKIHSIEYPAILVEQPKE------SNSKFPMEEKPKES-INVKPFA
LG F+DI++P ++ G +TP+E+ W+W +E + FD+ +++I+F+I + + + PKE + + +E K +E+ N KP A
Subjt: -LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNE---VPFDIYESDEIKFKIHSIEYPAILVEQPKE------SNSKFPMEEKPKES-INVKPFA
Query: PMVITASLDQDGLGPVSWWD
+ S DG+G VSWW+
Subjt: PMVITASLDQDGLGPVSWWD
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| Q2T9X1 DNA-directed RNA polymerase III subunit RPC8 | 9.1e-31 | 33.95 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
MF L + T+R+PP + D+I EL K +KV+ N+GLCI ++DI ++ ++FP DGA+ KV F +VF PF E++IGK++ + G+ +S
Subjt: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Query: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIY--NEVPFDIYE--SDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITAS
LGFF+DI +P E + ++F E + WVW Y E D+Y +E++F++ + P + + EE PK+ AP + S
Subjt: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIY--NEVPFDIYE--SDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITAS
Query: LDQDGLGPVSWWDGS
+ + GLG +SWW S
Subjt: LDQDGLGPVSWWDGS
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| Q9D2C6 DNA-directed RNA polymerase III subunit RPC8 | 2.4e-31 | 34.91 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
MF L + T+R+PP + D+I EL K +KVV N+GLCI ++DI ++ ++FP DGA+ KV F +VF PF E++IGK++ + G+ +S
Subjt: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Query: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIY--NEVPFDIY--ESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITAS
LGFF+DI +P E + ++F E + WVW Y E D+Y +EI+F++ + P + + EE PK+ AP + S
Subjt: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIY--NEVPFDIY--ESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITAS
Query: LDQDGLGPVSWW
+ + GLG +SWW
Subjt: LDQDGLGPVSWW
|
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| Q9Y535 DNA-directed RNA polymerase III subunit RPC8 | 1.8e-31 | 34.91 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
MF L + T+R+PP + D+I EL K +KVV N+GLCI ++DI ++ ++FP DGA+ KV F +VF PF E++IGK++ + G+ +S
Subjt: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Query: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIY--NEVPFDIY--ESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITAS
LGFF+DI +P E + ++F E + WVW Y E D+Y +EI+F++ + P +++ EE PK+ AP + S
Subjt: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIY--NEVPFDIY--ESDEIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITAS
Query: LDQDGLGPVSWW
+ + GLG +SWW
Subjt: LDQDGLGPVSWW
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G06790.1 RNA polymerase Rpb7 N-terminal domain-containing protein | 1.1e-63 | 52.51 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
MFYLS +EH+LRVPP LLNLP+ DAIK L+ +F+DKV+A+LGLC+S+YDI+SV+GGF+ P DGAATYKV ++VFRPF GEVI K +ES+ NGLR++
Subjt: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Query: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESD--EIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLD
LGFF+DIYVP LMP + PD N + WVW Y E D D +IKF++ SI YP++ E+ +++ KPFAPMV+T ++D
Subjt: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESD--EIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLD
Query: QDGLGPVSWWDGSGEAEDE
DGLGPVSWWD + + E
Subjt: QDGLGPVSWWDGSGEAEDE
|
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| AT1G06790.2 RNA polymerase Rpb7 N-terminal domain-containing protein | 1.4e-55 | 52.53 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
MFYLS +EH+LRVPP LLNLP+ DAIK L+ +F+DKV+A+LGLC+S+YDI+SV+GGF+ P DGAATYKV ++VFRPF GEVI K +ES+ NGLR++
Subjt: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Query: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESD--EIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITAS
LGFF+DIYVP LMP + PD N + WVW Y E D D +IKF++ SI YP++ E+ +++ KPFAPMV+T S
Subjt: LGFFEDIYVPVELMPSGSEFTPDENNGGRRRWVWIYNEVPFDIYESD--EIKFKIHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITAS
|
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| AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain | 3.0e-05 | 28.12 | Show/hide |
Query: LEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRISLGFFEDIYVPVELMPSGSEFTPDEN
LE K LG ++V + + G I G + V+F+ + F+ F GE+I G V + ++G+ + G E++Y+ MP ++ P EN
Subjt: LEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRISLGFFEDIYVPVELMPSGSEFTPDEN
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| AT5G59180.1 DNA-directed RNA polymerase II | 8.0e-06 | 25 | Show/hide |
Query: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
MF+ +E +++ P + + + +L K G +++ I ++ G I G T+ V + +VFRPF GE++ V N+ G
Subjt: MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Query: LGFFEDIYVPVELMPSGSEF
G + I+V L+P EF
Subjt: LGFFEDIYVPVELMPSGSEF
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