; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0000413 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0000413
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionF-box protein SKIP1
Genome locationchr05:27638798..27640984
RNA-Seq ExpressionPay0000413
SyntenyPay0000413
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056113.1 F-box protein SKIP1 [Cucumis melo var. makuwa]1.6e-17699.67Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWF AARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ
        RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ

Query:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

KAG6599142.1 F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. sororia]4.7e-15286.8Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV
        MAEP     SWAELT ECLTNI SRLTIEQRWRGPMLVCK W RAA D SLFSHFDLEPRF+S PTESPAWW P+FE KIDSMLRSAV+WSLGSLS+IR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ
        RHCSDSSL  VAQGCPNLEVLSIKSCANVTD SMAKIA GCQKL+EVDISYCHEISN+SL+LIG+HCPNIKTLKRN+FN LDPSQ KGIVPD+YL+ACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ

Query:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEA AIAKFM NLEHL+L FSKLSAKALT IC+GCPNLKYLDLFGCVNLTSRDI NATSSLENLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

XP_004144728.1 F-box protein SKIP1 [Cucumis sativus]1.8e-16493.73Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV
        MAEP    S WAELTHECLTNILSRLT+EQRWRGPMLVCKHWFRAA DPSLFSHFDLE RFESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ
        RHCSDSSLD VAQGCPNLEVLSIKSCANVTD SMAKIAFGCQKLREVDISYCHEISN+SLALIGRHCPNIKTLKRN+FNNLDPSQHKGIVPDNYLDA PQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ

Query:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLE+LELGFSKLSAKALT ICEGCPNLKYLDLFGCVNLTSRDI NATSSLE+LEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

XP_008452697.1 PREDICTED: F-box protein SKIP1 [Cucumis melo]4.2e-177100Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ
        RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ

Query:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

XP_038890479.1 F-box protein SKIP1 [Benincasa hispida]1.2e-16392.41Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV
        MAEP SESSSWAELTHECLTNILSRLTIEQRWRGPMLVCK W RAA DPSLFSHFDLEPRFES PTESPAWW PEFETKIDSMLRSAV WSLGSLS+IR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ
        RHCSDSSLDFVAQGCPNLEVLSIKSCANVTD SMAKIA GCQKLREVDISYCHEISNISLALIG+HCPNIKT+KRN+FNNLDPSQHKGIVPDNYL++CPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ

Query:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFM NLEHLELGFSKLSAKAL+ ICEGCP LK+LDLFGCVNLTSRDIANATSS+ENLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

TrEMBL top hitse value%identityAlignment
A0A0A0LM72 F-box domain-containing protein8.9e-16593.73Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV
        MAEP    S WAELTHECLTNILSRLT+EQRWRGPMLVCKHWFRAA DPSLFSHFDLE RFESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ
        RHCSDSSLD VAQGCPNLEVLSIKSCANVTD SMAKIAFGCQKLREVDISYCHEISN+SLALIGRHCPNIKTLKRN+FNNLDPSQHKGIVPDNYLDA PQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ

Query:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLE+LELGFSKLSAKALT ICEGCPNLKYLDLFGCVNLTSRDI NATSSLE+LEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A1S3BUE6 F-box protein SKIP12.0e-177100Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ
        RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ

Query:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A5A7UJH9 F-box protein SKIP17.7e-17799.67Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWF AARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ
        RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ

Query:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A5D3BD72 F-box protein SKIP12.0e-177100Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ
        RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ

Query:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A6J1KKL1 F-box protein SKIP1-like5.1e-15287.8Show/hide
Query:  SSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSL
        +SWAELT ECLTNI SRLTIEQRWRGPMLVCK W RAA D SLFSHFDL+PRF+S PTESPAWW P+FETKIDSMLRSAV+WSLGSLS+IR+RHCSDSSL
Subjt:  SSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSL

Query:  DFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQDVDSEAAA
          VAQGCPNLEVLSIKSCANVTD SMAKIA GCQKL+EVDISYCHEISN+SL+LIG+HCPNIKTLKRN+FN LDPSQ KGIVPD+YL+ACPQDVDSEA A
Subjt:  DFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQDVDSEAAA

Query:  IAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI
        IAKFM NLEHLEL FSK+SAKALT IC+GCPNLKYLDLFGCVNLTSRDI NATSSLENLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDIFRI
Subjt:  IAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI

SwissProt top hitse value%identityAlignment
Q9FDX1 F-box protein SKIP13.4e-9760Show/hide
Query:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDS
        + S W  L  E L NI+SRLTI++ W GPM V K W    RDP L+S FDLEP F+S P ES   W PEFE K+D MLRS V WS G L+ IRVRHCSD 
Subjt:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDS

Query:  SLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQDVDSEA
        +L + A  CPNL+VL+I+S  NVTD+SM KIAF C+ L+E+DISYCHEIS+ +L +IGR+CPN++ LKRN  +    S+H G VP  YLDACPQD D+EA
Subjt:  SLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQDVDSEA

Query:  AAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENL-EIRKPNFYIPRS--VFHTERYDHWRLYDERFQTDIFRI
         AI K M NLEHLE+ FS+LS K L SICEGCP L+YLDLFGCV+L+SRDI +  S L+ L E++KP+ Y+PRS  V  TERY HWRLYDERF     RI
Subjt:  AAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENL-EIRKPNFYIPRS--VFHTERYDHWRLYDERFQTDIFRI

Q9M096 Putative F-box/LRR-repeat protein 195.7e-7653.26Show/hide
Query:  WAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDF
        W+ELT ECL +I SRL+ EQRW GPMLV K+W  A  DP+L + FDLE RF S P ES  WW PEFE K+DS LRS V  S G L+ IR+RHC++ SL +
Subjt:  WAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDF

Query:  VAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQDVDSEAAAIA
         A+ CPNLEVL IK+C NVTD+SM KIA  C  LRE+DISY + I++ SL  +GR C N+K LKRN    L PS    + P +YL   P+  + EA  I 
Subjt:  VAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQDVDSEAAAIA

Query:  KFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENL-EIRKPNFYIPRSVFHTER
        K+M  L+HLE+ +S L+A+ L S+C+GC NL+Y+DL GC++LT  DI   TS L+NL EI KP+F  P +V    R
Subjt:  KFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENL-EIRKPNFYIPRSVFHTER

Q9M0U8 Putative F-box/LRR-repeat protein 211.3e-1929.88Show/hide
Query:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV--RHCS
        E  +W +L  E  T+IL RL++         VCK W R  +DPS++   +                   +     SM R  V  S G L  I V     S
Subjt:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV--RHCS

Query:  DSSLDFVAQGCPNLEVLSIKSC-ANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDAC-PQDV
        DS L ++     NL  L +  C   VT   +         L  ++++  H    + L  IG  CP +KTLK N    L P+  K     N LD   P + 
Subjt:  DSSLDFVAQGCPNLEVLSIKSC-ANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDAC-PQDV

Query:  DSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLT
        D +A AIA+ M  L HL+L  ++L+   L +I +GCP+L++LD+  C  ++
Subjt:  DSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLT

Q9S9V8 Putative F-box/LRR-repeat protein 91.9e-2331.37Show/hide
Query:  AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVR
        A  + E  +WAEL  E  ++IL RL   +  +    VCK W R  +DPS++   D+  + E+       +++      I+ +   AV  S G L  I + 
Subjt:  AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVR

Query:  HCSDSS-LDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ
        +  ++S L+++A    NL  L +  CA V    + + A     L E+DI+Y   I    L ++G+ CPN++TLK N                     C  
Subjt:  HCSDSS-LDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ

Query:  DV---DSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNL
        DV   D  A AIA+ M  L HL+L  + LS   L +I EGCP+LK L L  C+N+
Subjt:  DV---DSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNL

Q9UKC9 F-box/LRR-repeat protein 21.7e-1629.95Show/hide
Query:  GSLSVIRVRHC---SDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGI
        G L  + +R C    DSSL   AQ C N+E L++  C  +TDS+   ++  C KL+ +D++ C  I+N SL  I   C N++ L  ++ + +     + +
Subjt:  GSLSVIRVRHC---SDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGI

Query:  V------PDNYLDACPQDVDSEAAAIAKFMHNLEHLEL-GFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEI
        V          L  C Q  D     I  + H L  L L   S+++ + +  IC GC  L+ L L GC NLT   +     +   L+I
Subjt:  V------PDNYLDACPQDVDSEAAAIAKFMHNLEHLEL-GFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEI

Arabidopsis top hitse value%identityAlignment
AT4G05470.1 RNI-like superfamily protein9.2e-2129.88Show/hide
Query:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV--RHCS
        E  +W +L  E  T+IL RL++         VCK W R  +DPS++   +                   +     SM R  V  S G L  I V     S
Subjt:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV--RHCS

Query:  DSSLDFVAQGCPNLEVLSIKSC-ANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDAC-PQDV
        DS L ++     NL  L +  C   VT   +         L  ++++  H    + L  IG  CP +KTLK N    L P+  K     N LD   P + 
Subjt:  DSSLDFVAQGCPNLEVLSIKSC-ANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDAC-PQDV

Query:  DSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLT
        D +A AIA+ M  L HL+L  ++L+   L +I +GCP+L++LD+  C  ++
Subjt:  DSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLT

AT4G05497.1 RNI-like superfamily protein1.4e-2431.37Show/hide
Query:  AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVR
        A  + E  +WAEL  E  ++IL RL   +  +    VCK W R  +DPS++   D+  + E+       +++      I+ +   AV  S G L  I + 
Subjt:  AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVR

Query:  HCSDSS-LDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ
        +  ++S L+++A    NL  L +  CA V    + + A     L E+DI+Y   I    L ++G+ CPN++TLK N                     C  
Subjt:  HCSDSS-LDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQ

Query:  DV---DSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNL
        DV   D  A AIA+ M  L HL+L  + LS   L +I EGCP+LK L L  C+N+
Subjt:  DV---DSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNL

AT4G30640.1 RNI-like superfamily protein4.0e-7753.26Show/hide
Query:  WAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDF
        W+ELT ECL +I SRL+ EQRW GPMLV K+W  A  DP+L + FDLE RF S P ES  WW PEFE K+DS LRS V  S G L+ IR+RHC++ SL +
Subjt:  WAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDF

Query:  VAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQDVDSEAAAIA
         A+ CPNLEVL IK+C NVTD+SM KIA  C  LRE+DISY + I++ SL  +GR C N+K LKRN    L PS    + P +YL   P+  + EA  I 
Subjt:  VAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQDVDSEAAAIA

Query:  KFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENL-EIRKPNFYIPRSVFHTER
        K+M  L+HLE+ +S L+A+ L S+C+GC NL+Y+DL GC++LT  DI   TS L+NL EI KP+F  P +V    R
Subjt:  KFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENL-EIRKPNFYIPRSVFHTER

AT5G52480.1 RNI-like superfamily protein1.4e-1629.52Show/hide
Query:  DSMLRSAVRWSLGSLSVIRVRHC-SDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFN
        +++ R+AV  S G L  I +    SDS L ++A+   NL  L +  C+ +TD    +       L E+++S    +S  S+ L G  CPN+KTL  N   
Subjt:  DSMLRSAVRWSLGSLSVIRVRHC-SDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFN

Query:  NLDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRS
         L                   D D +A AIA+ M  L HL+L  +KL+   L +I +GCP+L++LDL  C+NL           +++L     +      
Subjt:  NLDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRS

Query:  VFHTERYDHW
              Y HW
Subjt:  VFHTERYDHW

AT5G57900.1 SKP1 interacting partner 12.4e-9860Show/hide
Query:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDS
        + S W  L  E L NI+SRLTI++ W GPM V K W    RDP L+S FDLEP F+S P ES   W PEFE K+D MLRS V WS G L+ IRVRHCSD 
Subjt:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDS

Query:  SLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQDVDSEA
        +L + A  CPNL+VL+I+S  NVTD+SM KIAF C+ L+E+DISYCHEIS+ +L +IGR+CPN++ LKRN  +    S+H G VP  YLDACPQD D+EA
Subjt:  SLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQDVDSEA

Query:  AAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENL-EIRKPNFYIPRS--VFHTERYDHWRLYDERFQTDIFRI
         AI K M NLEHLE+ FS+LS K L SICEGCP L+YLDLFGCV+L+SRDI +  S L+ L E++KP+ Y+PRS  V  TERY HWRLYDERF     RI
Subjt:  AAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENL-EIRKPNFYIPRS--VFHTERYDHWRLYDERFQTDIFRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGCCGTCGTCGGAGTCATCATCATGGGCGGAGCTGACTCACGAGTGTCTAACCAACATCCTCTCTCGTCTAACCATCGAGCAGCGGTGGCGCGGCCCTATGCT
CGTTTGCAAACATTGGTTCCGCGCCGCCAGGGACCCTTCTCTCTTTTCTCACTTCGATCTCGAACCCAGGTTCGAGTCTGCCCCCACCGAGTCTCCGGCCTGGTGGTTGC
CGGAGTTCGAGACCAAGATTGATTCCATGCTCCGATCTGCCGTCCGTTGGAGCCTTGGATCTCTTTCAGTTATTCGGGTTAGACACTGCTCCGATTCTTCTCTCGATTTC
GTCGCTCAAGGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCGCCAATGTTACTGATAGCTCAATGGCTAAGATTGCTTTTGGCTGCCAAAAGCTCCGGGAAGT
AGATATTAGCTATTGTCATGAAATCTCGAACATATCTTTGGCATTAATCGGCAGGCATTGTCCAAATATCAAGACTCTAAAACGAAACTATTTTAACAATCTAGATCCTT
CCCAACACAAGGGAATTGTCCCTGACAATTATCTAGATGCCTGCCCACAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAATTCATGCACAACTTGGAGCACCTTGAA
CTTGGTTTCTCTAAACTATCTGCTAAAGCTCTAACTTCGATCTGTGAAGGATGTCCTAACCTCAAGTACTTGGATTTGTTTGGGTGTGTGAACTTGACAAGCCGAGATAT
AGCAAATGCTACATCAAGTCTGGAGAATTTGGAGATTAGGAAACCAAATTTCTATATTCCAAGGTCGGTCTTTCACACAGAGAGGTATGACCATTGGAGGTTGTATGATG
AGAGATTCCAAACCGATATTTTCCGAATTTGA
mRNA sequenceShow/hide mRNA sequence
GAAAGGTCGGGAGAGACAACACTATATCTCATTTCTCACGCCAAATGATCGGATTGCGGTTTTTCTTATACACTACGCGCATCCCAACAAAACTCAAAAGGAAAAGAAAA
ATAAAAAGAAAAACCTTTATTTCCTTTCTTCATTCCTAAATTCATTTCTAAGGACACCCAAAAATGGCAGAGCCGTCGTCGGAGTCATCATCATGGGCGGAGCTGACTCA
CGAGTGTCTAACCAACATCCTCTCTCGTCTAACCATCGAGCAGCGGTGGCGCGGCCCTATGCTCGTTTGCAAACATTGGTTCCGCGCCGCCAGGGACCCTTCTCTCTTTT
CTCACTTCGATCTCGAACCCAGGTTCGAGTCTGCCCCCACCGAGTCTCCGGCCTGGTGGTTGCCGGAGTTCGAGACCAAGATTGATTCCATGCTCCGATCTGCCGTCCGT
TGGAGCCTTGGATCTCTTTCAGTTATTCGGGTTAGACACTGCTCCGATTCTTCTCTCGATTTCGTCGCTCAAGGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTG
CGCCAATGTTACTGATAGCTCAATGGCTAAGATTGCTTTTGGCTGCCAAAAGCTCCGGGAAGTAGATATTAGCTATTGTCATGAAATCTCGAACATATCTTTGGCATTAA
TCGGCAGGCATTGTCCAAATATCAAGACTCTAAAACGAAACTATTTTAACAATCTAGATCCTTCCCAACACAAGGGAATTGTCCCTGACAATTATCTAGATGCCTGCCCA
CAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAATTCATGCACAACTTGGAGCACCTTGAACTTGGTTTCTCTAAACTATCTGCTAAAGCTCTAACTTCGATCTGTGA
AGGATGTCCTAACCTCAAGTACTTGGATTTGTTTGGGTGTGTGAACTTGACAAGCCGAGATATAGCAAATGCTACATCAAGTCTGGAGAATTTGGAGATTAGGAAACCAA
ATTTCTATATTCCAAGGTCGGTCTTTCACACAGAGAGGTATGACCATTGGAGGTTGTATGATGAGAGATTCCAAACCGATATTTTCCGAATTTGATTCTGCAAGTGCACT
CTTAATACTATATTTGTAGCTGCACTTAGAAACCAAGATTAATGTTGCTTTCCTAAGTTGTACAGTTTTTAATTTACCTGTTCTGTTTTATGACAGTTACAAGTCTGTAT
TATCTTTTAAACTTGTATGGTGAACTAATGTGGCAGAAGGTTGGTACTCTTGTAGTTATTGTTATGGGTTTCAGGTTTCACCTTGTACATCTCTAATCTCTTGATATGTT
AATGACAAGACAACCCACATGACCTTAGAAAAGTAATTTTATATAGGTGGTCACCATAAAATTAAACTCATGACTTCT
Protein sequenceShow/hide protein sequence
MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDF
VAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLE
LGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI