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Pay0000424 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0000424
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionChlorophyll A-B binding protein
Genome locationchr05:26184957..26193581
RNA-Seq ExpressionPay0000424
SyntenyPay0000424
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR022796 - Chlorophyll A-B binding protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055599.1 uncharacterized protein E6C27_scaffold222G00820 [Cucumis melo var. makuwa]1.3e-7799.37Show/hide
Query:  MAAASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR
        MAAASA+LILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR
Subjt:  MAAASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR

Query:  RRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSYSLLTFLLTLFPFLTFNKVALV
        RRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSYSLLTFLLTLFPFLTFNKVALV
Subjt:  RRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSYSLLTFLLTLFPFLTFNKVALV
XP_008451793.1 PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo]5.3e-7997.47Show/hide
Query:  MWASEIYKWISIHARKSCTLEMAAASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL
        MWASEIYKWISIHARKSCTLEMAAASA+LILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL
Subjt:  MWASEIYKWISIHARKSCTLEMAAASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL

Query:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSY
        EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ+  Y
Subjt:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSY
XP_011648927.1 uncharacterized protein LOC101212671 [Cucumis sativus]2.2e-6988.61Show/hide
Query:  MWASEIYKWISIHARKSCTLEMAAASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL
        MWAS+IYKWISIHA + CTL+MAAAS ALILPINGGNLPPSQYLSFRH+ PSATFSRLGWSR  D GRST RTRGQAFRISNVSP +DGLIKQVIMVDPL
Subjt:  MWASEIYKWISIHARKSCTLEMAAASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL

Query:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSY
        EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEG+TGKGILAQ+  Y
Subjt:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSY
XP_016902490.1 PREDICTED: uncharacterized protein LOC103492970 isoform X2 [Cucumis melo]3.5e-7090.51Show/hide
Query:  MWASEIYKWISIHARKSCTLEMAAASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL
        MWASEIYKWISIHARKSCTLEMAAASA+LILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISN           VIMVDPL
Subjt:  MWASEIYKWISIHARKSCTLEMAAASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL

Query:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSY
        EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ+  Y
Subjt:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSY
XP_038889814.1 uncharacterized protein LOC120079625 [Benincasa hispida]3.6e-5990.3Show/hide
Query:  ASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQ
        AS +LILPI GGNLPPSQYLSFRH+HPSATFSR GWSRDQDVGRSTHRTRGQAF+ISNVSP KD LIKQVIMVDPLEAKR+AAKEMEKIKAKEKFKR+RQ
Subjt:  ASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQ

Query:  IEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSY
        IEAINGAWAMIGLTAGLVIEGQTGKGILAQ+  Y
Subjt:  IEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSY
TrEMBL top hitse value%identityAlignment
A0A0A0LH95 Uncharacterized protein1.1e-6988.61Show/hide
Query:  MWASEIYKWISIHARKSCTLEMAAASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL
        MWAS+IYKWISIHA + CTL+MAAAS ALILPINGGNLPPSQYLSFRH+ PSATFSRLGWSR  D GRST RTRGQAFRISNVSP +DGLIKQVIMVDPL
Subjt:  MWASEIYKWISIHARKSCTLEMAAASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL

Query:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSY
        EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEG+TGKGILAQ+  Y
Subjt:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSY
A0A1S3BSE0 uncharacterized protein LOC103492970 isoform X12.6e-7997.47Show/hide
Query:  MWASEIYKWISIHARKSCTLEMAAASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL
        MWASEIYKWISIHARKSCTLEMAAASA+LILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL
Subjt:  MWASEIYKWISIHARKSCTLEMAAASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL

Query:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSY
        EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ+  Y
Subjt:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSY
A0A1S4E3D1 uncharacterized protein LOC103492970 isoform X21.7e-7090.51Show/hide
Query:  MWASEIYKWISIHARKSCTLEMAAASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL
        MWASEIYKWISIHARKSCTLEMAAASA+LILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISN           VIMVDPL
Subjt:  MWASEIYKWISIHARKSCTLEMAAASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL

Query:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSY
        EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ+  Y
Subjt:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSY
A0A5A7UQ54 Uncharacterized protein6.4e-7899.37Show/hide
Query:  MAAASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR
        MAAASA+LILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR
Subjt:  MAAASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR

Query:  RRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSYSLLTFLLTLFPFLTFNKVALV
        RRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSYSLLTFLLTLFPFLTFNKVALV
Subjt:  RRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSYSLLTFLLTLFPFLTFNKVALV
A0A6J1I0N1 uncharacterized protein LOC111468645 isoform X11.6e-5282.48Show/hide
Query:  ASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRI---SNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR
        AS ALILPI+GGN   SQ LSFRH+H SATFSR GWSRD+DVG STHRTRGQAFRI    NVSP KD LIK+VIMVDPLEAKR+AAKEMEKIKAKEKFKR
Subjt:  ASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRI---SNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR

Query:  RRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSY
        RRQIEAINGAWAMIGLTAGL++EGQTGKGILAQ+  Y
Subjt:  RRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G28025.1 unknown protein7.5e-2354.62Show/hide
Query:  RHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRI---SNVS----PAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTA
        R + PS++  + G  R QD     +R R    R+    NVS    P K  + K+VIMVDPLEAKR+A+K+ME+IK +EK +RRR+IEAINGAWA+IGL  
Subjt:  RHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRI---SNVS----PAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTA

Query:  GLVIEGQTGKGILAQVKSY
        GLVIE QTGKGILAQ+  Y
Subjt:  GLVIEGQTGKGILAQVKSY
AT4G28025.2 unknown protein.5.2e-2452.76Show/hide
Query:  PPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRI---SNVS----PAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGA
        PP  +L    +  S++  R G  R QD     +R R    R+    NVS    P K  + K+VIMVDPLEAKR+A+K+ME+IK +EK +RRR+IEAINGA
Subjt:  PPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRI---SNVS----PAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGA

Query:  WAMIGLTAGLVIEGQTGKGILAQVKSY
        WA+IGL  GLVIE QTGKGILAQ+  Y
Subjt:  WAMIGLTAGLVIEGQTGKGILAQVKSY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGCATCTGAAATCTATAAATGGATAAGCATTCATGCAAGAAAAAGTTGCACTTTGGAGATGGCTGCTGCTTCTGCTGCGCTGATTCTCCCCATCAATGGAGGAAA
CCTTCCGCCTTCCCAATACCTCTCTTTCCGCCATAGTCACCCTTCTGCTACTTTTTCCAGGTTGGGTTGGAGTAGGGACCAAGATGTCGGTAGAAGTACCCACAGAACGA
GGGGTCAAGCATTTCGAATCTCTAATGTCTCGCCTGCTAAAGATGGGTTAATCAAACAGGTGATTATGGTTGACCCCTTGGAAGCCAAACGTATGGCGGCAAAAGAAATG
GAAAAGATCAAAGCGAAAGAGAAATTCAAGAGAAGACGTCAAATAGAAGCGATTAATGGAGCATGGGCAATGATCGGTCTGACGGCTGGGCTTGTCATTGAAGGTCAAAC
CGGAAAAGGAATTCTAGCACAGGTGAAAAGTTATAGCCTCTTGACATTTCTTTTAACCCTGTTCCCCTTTCTTACCTTCAACAAGGTTGCGCTGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATTAAAACAAGCTCTGTACAGCCATCAGTGAGCGTCATTGCACAAATGTCGTTCTCTATAAGATAAAGTGTTGAATGTGGGCATCTGAAATCTATAAATGGATAAGCATT
CATGCAAGAAAAAGTTGCACTTTGGAGATGGCTGCTGCTTCTGCTGCGCTGATTCTCCCCATCAATGGAGGAAACCTTCCGCCTTCCCAATACCTCTCTTTCCGCCATAG
TCACCCTTCTGCTACTTTTTCCAGGTTGGGTTGGAGTAGGGACCAAGATGTCGGTAGAAGTACCCACAGAACGAGGGGTCAAGCATTTCGAATCTCTAATGTCTCGCCTG
CTAAAGATGGGTTAATCAAACAGGTGATTATGGTTGACCCCTTGGAAGCCAAACGTATGGCGGCAAAAGAAATGGAAAAGATCAAAGCGAAAGAGAAATTCAAGAGAAGA
CGTCAAATAGAAGCGATTAATGGAGCATGGGCAATGATCGGTCTGACGGCTGGGCTTGTCATTGAAGGTCAAACCGGAAAAGGAATTCTAGCACAGGTGAAAAGTTATAG
CCTCTTGACATTTCTTTTAACCCTGTTCCCCTTTCTTACCTTCAACAAGGTTGCGCTGGTTTAGAAAGTTTGTTTATTACTTTATGTGATTGGGAGTGTTAGCTTAAAAA
ACTTGGATAAATTATTAACTACCAAAATTTACAAGGTTAGGAGGTAGTCTCCATTATGCATTTGAGTGAACATGGAGGTGAAAGCTTCATCACATGTGGAAGGGTTGGAC
AAAAGTAACGGAGTTTTAAAGCTTTTCAACTCTAATAATTAGTAACCTCTTATGTCTTTCAGTTTTAGGCTCTCTAAGCTATTTAGGATCAAATCTTTTTGAACCTCTTC
TCTTCTCTTTCTATCCTAGAGGTTGGTGTTCGATGTTTGAGGAGGTGCTCTTGAATCGTCCTTAAAATTCTTTGTTGGTCTTCTTTTTTTGATTTTTTGTTGAGCATGTG
GCTTGAGAAGAACATCAGCTTTTCTTCAATAGGTGGATTGGTATGGAGAGGATCTTTGGGATTTGATTAGGCTTAATTCCTCTCATGGGCGTTTGTTGATAGGCTTTTGT
TTGTTTGTTTGTTTTGTTTTGTGTTGTGGATATAGCTTACCATTATTCTTTTGGATTGGACTCCTTTCTGTAATTGGGTGTGAATGTTGTTTTGTTTTTGGCTTATTTTT
GTACTTCTTTCTATATCCTTTCATCTTTCACTGAGTGTTTTTTTTTTTTTTAATTTAAAGAAAATGTAGATAATAATCTTATATTGGGTTTTAAACTTCTAGAAATTTAG
AACTCATTGATTATGTTTCCTTGTTTCTAGTTTTCTTTTGGTAACCTTCAATTTTCTGTTTTTGGTTTTTGCTACCACCATTTTTTTTCTTTCCTAATTTTAAAAGGAGA
GCAGTTATCAAAAGTATAGCTTTTGTTTTTATAATCTCTCTAAGCTTTCAAATATGTTGCCATGAAATAGGAAACAATCTTAGTTTTGAAAGGAGCTATACAAAACATAG
CTTTTGTTTTTAACTTAGGTGTAAGTTTTCAAGTTTCCATAAAAACAGTAAACAAGCTTAGTTTTTATAAACAAAGAAACTAAAAATGAAAACATAACATAACAGTCTAT
AGAGATGAGATGCGATGTGATGACCAATGTGTGTTATTTTCCAGTAACTGTTTCCATGAAAACAGTAAACAAGCTTTAGTGAAAATGTAACACTACAGTCTATATAGATC
CGTGAGATGTGATGACCGACATGTGTATAGCTCAGTAGTCCAATATTATGTTTTTTCTTCACTTATTTTCCAGTTGGCCGACTACTTCAGCATCCTTATCAACTTCTTCA
TACGGTAGAAACATCTTCGAGGGGAAAAGGAGATCTTTGAATGAAAGAGGCAGTGAGATGAAGAAGCAGGTTCCAACGGTCTTTGTTTTGAAGGATTCTATTGGCTATAC
AATTAAATGTACTACCATTTTTTTAAAATATTCTCTTCTCTTGTGAAGTCTATAAGCTTGAATGATTCAAGATTAATTAATTAATTATATTCAATGATTTGAGTTTAATT
AATTAATTACATTAATTAACTATATAGAGTAAACCTTGTAGATC
Protein sequenceShow/hide protein sequence
MWASEIYKWISIHARKSCTLEMAAASAALILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEM
EKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQVKSYSLLTFLLTLFPFLTFNKVALV