| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0031437.1 pol protein [Cucumis melo var. makuwa] | 2.6e-113 | 40.44 | Show/hide |
Query: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD--------------VDF
MDWLSANHANIDCYGKEVVFNPPSEASFKFRG +ASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD VDF
Subjt: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD--------------VDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
Query: -------------------------------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--
AEHEEHLHQVLETLRANKLYAKFSK
Subjt: -------------------------------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--
Query: --------------------------SVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVP
+VTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVP
Subjt: --------------------------SVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVP
Query: DGSGNFVIYSDASKKGLGC---------------------------------------------------------------------------------
DGSGNFVIYSDASKKGLGC
Subjt: DGSGNFVIYSDASKKGLGC---------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLP
VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLP
Subjt: ------------------------------------------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLP
Query: KTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS
KTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS
Subjt: KTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS
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| KAA0033825.1 pol protein [Cucumis melo var. makuwa] | 2.6e-113 | 40.44 | Show/hide |
Query: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD--------------VDF
MDWLSANHANIDCYGKEVVFNPPSEASFKFRG +ASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD VDF
Subjt: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD--------------VDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
Query: -------------------------------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--
AEHEEHLHQVLETLRANKLYAKFSK
Subjt: -------------------------------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--
Query: --------------------------SVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVP
+VTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVP
Subjt: --------------------------SVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVP
Query: DGSGNFVIYSDASKKGLGC---------------------------------------------------------------------------------
DGSGNFVIYSDASKKGLGC
Subjt: DGSGNFVIYSDASKKGLGC---------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLP
VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLP
Subjt: ------------------------------------------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLP
Query: KTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS
KTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS
Subjt: KTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS
|
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| KAA0048442.1 pol protein [Cucumis melo var. makuwa] | 5.6e-116 | 41.8 | Show/hide |
Query: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD--------------VDF
MDWLSANHANIDC+GKEVVFNPPSEASFKFRG +ASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPD VDF
Subjt: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD--------------VDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
Query: -------------------------------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--
AEHEEHLHQVLETLRANKLYAKFSK
Subjt: -------------------------------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--
Query: --------------------------SVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVP
+VTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVP
Subjt: --------------------------SVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVP
Query: DGSGNFVIYSDASKKGLGC---------------------------------------------------------------------------------
DGSGNFVIYSDASKKGLGC
Subjt: DGSGNFVIYSDASKKGLGC---------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTL+GYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt: -----------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
Query: S
S
Subjt: S
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| KAA0066365.1 pol protein [Cucumis melo var. makuwa] | 2.4e-114 | 42.03 | Show/hide |
Query: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD--------------VDF
MDWLSANHANIDC+GKEVVFNPPS ASFKFRG +ASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPD VDF
Subjt: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD--------------VDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
AIELEP TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
Query: -----------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK----------------------
AEHEEHLHQVLETLRANKLYAKFSK
Subjt: -----------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK----------------------
Query: ------SVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC-
+VTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC
Subjt: ------SVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC-
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS
VKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRL KSAHFVPGKSTYTAS
Subjt: ------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS
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| XP_008460554.1 PREDICTED: uncharacterized protein LOC103499342 [Cucumis melo] | 2.3e-125 | 72.3 | Show/hide |
Query: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYP--------------DVDF
MDWLSAN+A+I C KEVVFNP ASFKF+G +ASKLL+QGTW ILASVVD E EVSLSSE VVREYP DVDF
Subjt: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYP--------------DVDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSAEHEEHLHQVLETLRANKLYAKFSKSVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSR
AI+LE T PISRAPYRM PAELK+LKVQLQELLDKGFIRP AEHEEHLHQVL TL ANKLYAKF K SE+RSFLGLAGYYRRFVE FS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSAEHEEHLHQVLETLRANKLYAKFSKSVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSR
Query: IASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGY
IASPLTQLT+K TPFVWSPAC+ SFQELKQKLV+ PVLTVPDGSG+FVIYSDASKK L VKAPRQ P GLLQPLSV GWKWESVSMDFITGLP+TL+GY
Subjt: IASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGY
Query: TVIWVVVDRLTKSAHFVPGKSTYTASNAVDPLSAGARLESRGC
TVIWV+VDRLTKSAHF+ GKSTYTAS +D L G R SR C
Subjt: TVIWVVVDRLTKSAHFVPGKSTYTASNAVDPLSAGARLESRGC
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3CCQ8 uncharacterized protein LOC103499342 | 1.1e-125 | 72.3 | Show/hide |
Query: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYP--------------DVDF
MDWLSAN+A+I C KEVVFNP ASFKF+G +ASKLL+QGTW ILASVVD E EVSLSSE VVREYP DVDF
Subjt: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYP--------------DVDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSAEHEEHLHQVLETLRANKLYAKFSKSVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSR
AI+LE T PISRAPYRM PAELK+LKVQLQELLDKGFIRP AEHEEHLHQVL TL ANKLYAKF K SE+RSFLGLAGYYRRFVE FS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSAEHEEHLHQVLETLRANKLYAKFSKSVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSR
Query: IASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGY
IASPLTQLT+K TPFVWSPAC+ SFQELKQKLV+ PVLTVPDGSG+FVIYSDASKK L VKAPRQ P GLLQPLSV GWKWESVSMDFITGLP+TL+GY
Subjt: IASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGY
Query: TVIWVVVDRLTKSAHFVPGKSTYTASNAVDPLSAGARLESRGC
TVIWV+VDRLTKSAHF+ GKSTYTAS +D L G R SR C
Subjt: TVIWVVVDRLTKSAHFVPGKSTYTASNAVDPLSAGARLESRGC
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| A0A5A7TY28 Reverse transcriptase | 2.7e-116 | 41.8 | Show/hide |
Query: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD--------------VDF
MDWLSANHANIDC+GKEVVFNPPSEASFKFRG +ASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPD VDF
Subjt: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD--------------VDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
Query: -------------------------------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--
AEHEEHLHQVLETLRANKLYAKFSK
Subjt: -------------------------------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--
Query: --------------------------SVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVP
+VTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVP
Subjt: --------------------------SVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVP
Query: DGSGNFVIYSDASKKGLGC---------------------------------------------------------------------------------
DGSGNFVIYSDASKKGLGC
Subjt: DGSGNFVIYSDASKKGLGC---------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTL+GYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt: -----------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
Query: S
S
Subjt: S
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| A0A5A7UBS1 Reverse transcriptase | 1.3e-113 | 40.44 | Show/hide |
Query: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD--------------VDF
MDWLSANHANIDCYGKEVVFNPPSEASFKFRG +ASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD VDF
Subjt: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD--------------VDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
Query: -------------------------------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--
AEHEEHLHQVLETLRANKLYAKFSK
Subjt: -------------------------------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--
Query: --------------------------SVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVP
+VTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVP
Subjt: --------------------------SVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVP
Query: DGSGNFVIYSDASKKGLGC---------------------------------------------------------------------------------
DGSGNFVIYSDASKKGLGC
Subjt: DGSGNFVIYSDASKKGLGC---------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLP
VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLP
Subjt: ------------------------------------------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLP
Query: KTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS
KTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS
Subjt: KTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS
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| A0A5A7VKS7 Reverse transcriptase | 1.1e-114 | 42.03 | Show/hide |
Query: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD--------------VDF
MDWLSANHANIDC+GKEVVFNPPS ASFKFRG +ASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPD VDF
Subjt: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD--------------VDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
AIELEP TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
Query: -----------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK----------------------
AEHEEHLHQVLETLRANKLYAKFSK
Subjt: -----------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK----------------------
Query: ------SVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC-
+VTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC
Subjt: ------SVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC-
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS
VKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRL KSAHFVPGKSTYTAS
Subjt: ------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS
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| A0A5D3CQB5 Reverse transcriptase | 1.3e-113 | 40.44 | Show/hide |
Query: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD--------------VDF
MDWLSANHANIDCYGKEVVFNPPSEASFKFRG +ASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD VDF
Subjt: MDWLSANHANIDCYGKEVVFNPPSEASFKFRG-------------QASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD--------------VDF
Query: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS
Subjt: AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS----------------------------------------------------------
Query: -------------------------------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--
AEHEEHLHQVLETLRANKLYAKFSK
Subjt: -------------------------------------------------------------------------AEHEEHLHQVLETLRANKLYAKFSK--
Query: --------------------------SVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVP
+VTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVP
Subjt: --------------------------SVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVP
Query: DGSGNFVIYSDASKKGLGC---------------------------------------------------------------------------------
DGSGNFVIYSDASKKGLGC
Subjt: DGSGNFVIYSDASKKGLGC---------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLP
VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLP
Subjt: ------------------------------------------------------------------VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLP
Query: KTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS
KTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS
Subjt: KTLRGYTVIWVVVDRLTKSAHFVPGKSTYTAS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P03356 Gag-Pol polyprotein | 8.4e-14 | 36.07 | Show/hide |
Query: KSVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASK---KG-----L
++V P T ++R FLG AG+ R ++ F+ +A+PL LTK GT F W P ++++QE+KQ L+TAP L +PD + F ++ D + KG L
Subjt: KSVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASK---KG-----L
Query: GCVKAPRQHPAGLLQPLSVPGW
G + P + + L P++ GW
Subjt: GCVKAPRQHPAGLLQPLSVPGW
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| P08361 Gag-Pol polyprotein | 4.9e-14 | 38.6 | Show/hide |
Query: PSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASK---KG-----LGCVKAPRQ
P T ++R FLG AG+ R ++ F+ +A+PL LTK GT F W P +++FQE+KQ L+TAP L +PD + F ++ D + KG LG + P
Subjt: PSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASK---KG-----LGCVKAPRQ
Query: HPAGLLQPLSVPGW
+ + L P++ GW
Subjt: HPAGLLQPLSVPGW
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| P26808 Gag-Pol polyprotein | 6.5e-14 | 36.07 | Show/hide |
Query: KSVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASK---KG-----L
++V P T ++R FLG AG+ R ++ F+ +A+PL LTK GT F W P ++++QE+KQ L+TAP L +PD + F ++ D + KG L
Subjt: KSVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASK---KG-----L
Query: GCVKAPRQHPAGLLQPLSVPGW
G + P + + L P++ GW
Subjt: GCVKAPRQHPAGLLQPLSVPGW
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| P26809 Gag-Pol polyprotein | 6.5e-14 | 36.07 | Show/hide |
Query: KSVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASK---KG-----L
++V P T ++R FLG AG+ R ++ F+ +A+PL LTK GT F W P ++++QE+KQ L+TAP L +PD + F ++ D + KG L
Subjt: KSVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASK---KG-----L
Query: GCVKAPRQHPAGLLQPLSVPGW
G + P + + L P++ GW
Subjt: GCVKAPRQHPAGLLQPLSVPGW
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| Q7SVK7 Gag-pol polyprotein | 8.4e-14 | 37.72 | Show/hide |
Query: PSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASK---KG-----LGCVKAPRQ
P T ++R FLG AG+ R ++ F+ +A+PL LTK GT F W P ++++QE+KQ L+TAP L +PD + F ++ D + KG LG + P
Subjt: PSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASK---KG-----LGCVKAPRQ
Query: HPAGLLQPLSVPGW
+ + L P++ GW
Subjt: HPAGLLQPLSVPGW
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