CuGenDBv2

Gene ID	Pay0000531
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Genome location	chr04:6446390..6447673
RNA-Seq Expression	Pay0000531
Synteny	Pay0000531
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0008233 - peptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR005162 - Retrotransposon gag domain IPR036875 - Zinc finger, CCHC-type superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035455.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

9.1e-218

95.8

Show/hide

Query:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM
        MPPRTGRR RQNQDGMQGPTQ PSVGESSTLGVRGGAGNEQFARTTQEIGR DRAEPSDPEKAYGIERLKKLGATVFEGS DPAD ENWLNMLEKCFDVM
Subjt:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-
        SQPIRSTVRSQ GQ+SIASTVRR PC SCGRNHRGQCLVGA VCYQCGQPGHFKKDCPQLNM +QRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGR 
Subjt:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-

Query:  RATGK
        R  GK
Subjt:  RATGK

KAA0056684.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

9.1e-218

95.8

Show/hide

Query:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM
        MPPRTGRR RQNQDGMQGPTQ PSVGESSTLGVRGGAGNEQFARTTQEIGR DRAEPSDPEKAYGIERLKKLGATVFEGS DPAD ENWLNMLEKCFDVM
Subjt:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-
        SQPIRSTVRSQ GQ+SIASTVRR PC SCGRNHRGQCLVGA VCYQCGQPGHFKKDCPQLNM +QRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGR 
Subjt:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-

Query:  RATGK
        R  GK
Subjt:  RATGK

KAA0066849.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

9.1e-218

95.8

Show/hide

Query:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM
        MPPRTGRR RQNQDGMQGPTQ PSVGESSTLGVRGGAGNEQFARTTQEIGR DRAEPSDPEKAYGIERLKKLGATVFEGS DPAD ENWLNMLEKCFDVM
Subjt:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-
        SQPIRSTVRSQ GQ+SIASTVRR PC SCGRNHRGQCLVGA VCYQCGQPGHFKKDCPQLNM +QRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGR 
Subjt:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-

Query:  RATGK
        R  GK
Subjt:  RATGK

TYK06334.1 putative polyprotein [Cucumis melo var. makuwa]

9.1e-218

95.8

Show/hide

Query:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM
        MPPRTGRR RQNQDGMQGPTQ PSVGESSTLGVRGGAGNEQFARTTQEIGR DRAEPSDPEKAYGIERLKKLGATVFEGS DPAD ENWLNMLEKCFDVM
Subjt:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-
        SQPIRSTVRSQ GQ+SIASTVRR PC SCGRNHRGQCLVGA VCYQCGQPGHFKKDCPQLNM +QRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGR 
Subjt:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-

Query:  RATGK
        R  GK
Subjt:  RATGK

TYK27507.1 reverse transcriptase [Cucumis melo var. makuwa]

9.1e-218

95.8

Show/hide

Query:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM
        MPPRTGRR RQNQDGMQGPTQ PSVGESSTLGVRGGAGNEQFARTTQEIGR DRAEPSDPEKAYGIERLKKLGATVFEGS DPAD ENWLNMLEKCFDVM
Subjt:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-
        SQPIRSTVRSQ GQ+SIASTVRR PC SCGRNHRGQCLVGA VCYQCGQPGHFKKDCPQLNM +QRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGR 
Subjt:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-

Query:  RATGK
        R  GK
Subjt:  RATGK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T1Y5 Reverse transcriptase

4.4e-218

95.8

Show/hide

Query:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM
        MPPRTGRR RQNQDGMQGPTQ PSVGESSTLGVRGGAGNEQFARTTQEIGR DRAEPSDPEKAYGIERLKKLGATVFEGS DPAD ENWLNMLEKCFDVM
Subjt:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-
        SQPIRSTVRSQ GQ+SIASTVRR PC SCGRNHRGQCLVGA VCYQCGQPGHFKKDCPQLNM +QRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGR 
Subjt:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-

Query:  RATGK
        R  GK
Subjt:  RATGK

A0A5A7U2V7 Reverse transcriptase

4.4e-218

95.8

Show/hide

Query:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM
        MPPRTGRR RQNQDGMQGPTQ PSVGESSTLGVRGGAGNEQFARTTQEIGR DRAEPSDPEKAYGIERLKKLGATVFEGS DPAD ENWLNMLEKCFDVM
Subjt:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-
        SQPIRSTVRSQ GQ+SIASTVRR PC SCGRNHRGQCLVGA VCYQCGQPGHFKKDCPQLNM +QRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGR 
Subjt:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-

Query:  RATGK
        R  GK
Subjt:  RATGK

A0A5A7UNA3 Reverse transcriptase

4.4e-218

95.8

Show/hide

Query:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM
        MPPRTGRR RQNQDGMQGPTQ PSVGESSTLGVRGGAGNEQFARTTQEIGR DRAEPSDPEKAYGIERLKKLGATVFEGS DPAD ENWLNMLEKCFDVM
Subjt:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-
        SQPIRSTVRSQ GQ+SIASTVRR PC SCGRNHRGQCLVGA VCYQCGQPGHFKKDCPQLNM +QRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGR 
Subjt:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-

Query:  RATGK
        R  GK
Subjt:  RATGK

A0A5D3BHI1 Reverse transcriptase

4.4e-218

95.8

Show/hide

Query:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM
        MPPRTGRR RQNQDGMQGPTQ PSVGESSTLGVRGGAGNEQFARTTQEIGR DRAEPSDPEKAYGIERLKKLGATVFEGS DPAD ENWLNMLEKCFDVM
Subjt:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-
        SQPIRSTVRSQ GQ+SIASTVRR PC SCGRNHRGQCLVGA VCYQCGQPGHFKKDCPQLNM +QRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGR 
Subjt:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-

Query:  RATGK
        R  GK
Subjt:  RATGK

A0A5D3BS67 Reverse transcriptase

4.4e-218

95.8

Show/hide

Query:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM
        MPPRTGRR RQNQDGMQGPTQ PSVGESSTLGVRGGAGNEQFARTTQEIGR DRAEPSDPEKAYGIERLKKLGATVFEGS DPAD ENWLNMLEKCFDVM
Subjt:  MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-
        SQPIRSTVRSQ GQ+SIASTVRR PC SCGRNHRGQCLVGA VCYQCGQPGHFKKDCPQLNM +QRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGR 
Subjt:  SQPIRSTVRSQQGQKSIASTVRRTPCMSCGRNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGR-

Query:  RATGK
        R  GK
Subjt:  RATGK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCCACCACGTACTGGTAGACGATGCCGGCAGAATCAGGACGGGATGCAAGGTCCTACCCAAGTTCCATCTGTAGGGGAATCTAGTACCCTAGGAGTTCGAGGTGGGGC
AGGAAACGAGCAGTTTGCGAGAACTACACAGGAAATAGGAAGGCCTGATAGAGCAGAGCCTAGTGATCCAGAAAAGGCATACGGAATTGAACGACTGAAGAAGTTAGGGG
CTACAGTGTTTGAAGGTTCCATAGATCCAGCTGATGTAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTG
GCCACATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGGCGCAGTGATGCACGTGCTTTAGACTGGCAGACTTTTAGAGGCATATTCGAAGA
TAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAGTGGCTGAGTATGAGAGGAAGTATACCGAGCTTTCAC
GGTATGCTGACGTTATTGTAGCTTCTGAGAGTGACAGGTGCCGAAGGTTTGAAAGAGGGTTGCGTTTTGAAATACGTACCCCAGTTACAGCCATTGCTAAGTGGACGAAT
TTCTCTCAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGTATAACAGAAGAGAAATCGGCAGTGGAGCTTAGTCGTGGGACTTCAACAGCTAGTGGATTTAGAGGCCG
TGAGCAGCGGAGGTTCACGCCTGGGATAAATATTTCAAGCCGTCAAGATTTTAAGAATCGCTCTGGAGGCCAAGCATCGAGAAACGTGAGTTATGGTAGTGTTTTTCAGA
GACAGAGCCAGAGAATACCTAGTCAACCCATTAGATCAACAGTAAGATCGCAACAAGGTCAGAAGTCCATTGCTAGTACCGTCAGGCGAACACCATGCATGAGTTGTGGC
AGGAACCATCGGGGTCAGTGTTTGGTAGGTGCCGATGTATGTTACCAGTGCGGACAGCCAGGACATTTCAAGAAAGATTGTCCGCAGTTGAACATGAAAATTCAGAGAGA
TCAGGGAGTTGGGTCCCAGACAGTTGAGCAATCGAGAGTTTCAGTGGTTCCAACAGAGGGCACCAGTGGTGCAAGGCAAAAGGGAGTTGTTGGAAGACGAGCAACAGGGA
AAAGTCTATGCTATGACTCAACAAGAAGCGGAGGACGCACCAGACGTTATTACTGGTACGATTCTTATTTGTAA

mRNA sequence

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Protein sequence

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MPPRTGRRCRQNQDGMQGPTQVPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVMNCPEERKVRL
ATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTN
FSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQQGQKSIASTVRRTPCMSCG
RNHRGQCLVGADVCYQCGQPGHFKKDCPQLNMKIQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGRRATGKSLCYDSTRSGGRTRRYYWYDSYL

Pay0000531 (gene) of Melon (Payzawat) v1 genome