; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0000541 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0000541
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionYrdC domain-containing protein
Genome locationchr12:4366678..4371214
RNA-Seq ExpressionPay0000541
SyntenyPay0000541
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0006450 - regulation of translational fidelity (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0000049 - tRNA binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0003725 - double-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006070 - YrdC-like domain
IPR017945 - DHBP synthase RibB-like alpha/beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64727.2 hypothetical protein Csa_013125 [Cucumis sativus]6.3e-14596.35Show/hide
Query:  MADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAE
        MADSLSLIRTF TFPSS LGSSNYGIVSFLQRNRGSRVSFLKT+WSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAE
Subjt:  MADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAE

Query:  AVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANL
        AVHRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANL
Subjt:  AVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANL

Query:  SGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI
        SGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTE+GTFKIIRAGSAE+QTIATL+RYSLLEAAATI
Subjt:  SGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI

TYK21224.1 yrdC domain-containing protein [Cucumis melo var. makuwa]5.9e-14386.94Show/hide
Query:  MADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDAC---
        MADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCM VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDAC   
Subjt:  MADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDAC---

Query:  -------------------------------------SAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSV
                                             SAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSV
Subjt:  -------------------------------------SAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSV

Query:  LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIA
        LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIA
Subjt:  LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIA

Query:  TLQRYSLLEAAATI
        TLQRYSLLEAAATI
Subjt:  TLQRYSLLEAAATI

XP_004148791.1 yrdC domain-containing protein, mitochondrial isoform X1 [Cucumis sativus]7.2e-14996.44Show/hide
Query:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MNTLPAKMADSLSLIRTF TFPSS LGSSNYGIVSFLQRNRGSRVSFLKT+WSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTE+GTFKIIRAGSAE+QTIATL+RYSLLEAAATI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI

XP_008465284.1 PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis melo]8.2e-15399.64Show/hide
Query:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCM VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI

XP_038893581.1 yrdC domain-containing protein, mitochondrial isoform X1 [Benincasa hispida]3.8e-14290.75Show/hide
Query:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MN LPAKM +SLSLIRTF TFPSSHLGS NYG+VSFLQ+NRGSRVSF KT WSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACS+EAVHRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGE+S+L+KSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTERGT+KI+RAGSA++QT+A L+RYSLLE AA+I
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI

TrEMBL top hitse value%identityAlignment
A0A0A0LUP4 YrdC-like domain-containing protein3.5e-14996.44Show/hide
Query:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MNTLPAKMADSLSLIRTF TFPSS LGSSNYGIVSFLQRNRGSRVSFLKT+WSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTE+GTFKIIRAGSAE+QTIATL+RYSLLEAAATI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI

A0A1S3CNI2 yrdC domain-containing protein, mitochondrial4.0e-15399.64Show/hide
Query:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCM VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI

A0A5A7T5W1 YrdC domain-containing protein4.0e-15399.64Show/hide
Query:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCM VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAATI

A0A5D3DCB7 YrdC domain-containing protein2.9e-14386.94Show/hide
Query:  MADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDAC---
        MADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCM VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDAC   
Subjt:  MADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDAC---

Query:  -------------------------------------SAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSV
                                             SAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSV
Subjt:  -------------------------------------SAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSV

Query:  LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIA
        LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIA
Subjt:  LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIA

Query:  TLQRYSLLEAAATI
        TLQRYSLLEAAATI
Subjt:  TLQRYSLLEAAATI

A0A6J1KDV4 yrdC domain-containing protein, mitochondrial3.7e-13586.57Show/hide
Query:  LLPTTMNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDT
        +LPTTMNT PAKM + LSLIRTFATFPSS LG+ NYG VSFL  NRGSR++F KT WSLEKC MRVEN LQALRPASEAFAQEAT+ALKAGKVIAVPTDT
Subjt:  LLPTTMNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDT

Query:  LYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRR
        LYGLACDACS+EAV+RIYEIKGRKLTSPLAICVG VSDITR+A+ DHLP GLLDSLLPGPVTVVLKRGESS+L+KSLNPGL+SIGVRVPDADFIRLISRR
Subjt:  LYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRR

Query:  SETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAA
        S TALALTSANLSG+PSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLT+RG FKIIRAGSA++QT+ATL+RYSLLE A
Subjt:  SETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAA

SwissProt top hitse value%identityAlignment
Q0VC80 YrdC domain-containing protein, mitochondrial5.3e-4649.5Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS
        A   L+AG V+AVPTDTLYGLAC A  +EA+  +Y +KGR  T PLA+C+G V+D+ RY     +P GLL  LLPGPVT+V++R E   L+K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYS
        +G+R+PD  F++ +++     LALTSANLS Q SS+ V +F++LW H + + DGG +     P  R GST+VDL+  G F IIR G A + T A LQ Y 
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYS

Query:  LL
        LL
Subjt:  LL

Q3U5F4 YrdC domain-containing protein, mitochondrial2.1e-4247.78Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS
        A   L+AG V+AVPTDTLYGLAC A S+ A+  +Y +KGR    PLA+C+G V+D+ RY     +P  LL+ L PGPVT+V++R E   L+K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATL-QRY
        +G+R+PD  F+  +++     LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST+VDL+  G F IIR G A + T + L Q+Y
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATL-QRY

Query:  SLL
         LL
Subjt:  SLL

Q499R4 YrdC domain-containing protein, mitochondrial1.6e-4247.78Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS
        A   L+AG V+AVPTDTLYGLAC A  + A+  +Y +KGR    PLA+C+G V+D+ RY     +P  LL+ L PGPVT+V++R E   L+K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQ-RY
        +G+R+PD  F+  +++     LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST+VDL+  G F IIR+G A + T A LQ +Y
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQ-RY

Query:  SLL
         LL
Subjt:  SLL

Q60369 Putative threonylcarbamoyl-AMP synthase7.8e-2135.33Show/hide
Query:  GKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKR--GESSVLDKSLNPGLDSIGVRV
        GK++   TDTLYG++ +A + +AV ++Y IK R+   PL+ICV   ++I +YA  + L   ++D  LPGP+T++LK+  G   ++ K      D IG+R+
Subjt:  GKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKR--GESSVLDKSLNPGLDSIGVRV

Query:  PDADFIRLISRRSETALALTSANLSGQPSSVCVNDFE-NLWQHCAYVYDGGVLPAGRAGSTIVDLTE
        PD   IR +   S   L  TSAN+SG+ S   V++ +  + +   YV D G     +  STI+ + +
Subjt:  PDADFIRLISRRSETALALTSANLSGQPSSVCVNDFE-NLWQHCAYVYDGGVLPAGRAGSTIVDLTE

Q86U90 YrdC domain-containing protein, mitochondrial1.1e-4348.08Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS
        A   L+AG V+AVPTDTLYGLAC A  + A+  +Y +KGR    PLA+C+G V+D+ RY     +P GLL  LLPGPVT+V++R E   L+K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATL-QRY
        +G+R+PD  F++ +++  E  LALTSANLS Q SS+ V +F++LW   + V DGG +     P  R GST+VDL+  G F IIR G A + T A L Q+Y
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATL-QRY

Query:  SLLEAAAT
         LL + A+
Subjt:  SLLEAAAT

Arabidopsis top hitse value%identityAlignment
AT3G01920.1 DHBP synthase RibB-like alpha/beta domain3.7e-1030Show/hide
Query:  QEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSG----------LLDSLLPGPVTVVLKR----
        Q   D LK G V  +PTDT+Y +ACD  +  AV R+  IK  + + PL+I    + DI  +  T   P G           +   LPGP T +L      
Subjt:  QEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSG----------LLDSLLPGPVTVVLKR----

Query:  -------GESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLW-----QHCAYVYDGGVLPAGRAGSTIVDLTER
               G +SV   S      ++GVR+ D    + I ++ +  L  TS  + G   +  + D   +      +   +V DGG+  A    STIVD+T  
Subjt:  -------GESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLW-----QHCAYVYDGGVLPAGRAGSTIVDLTER

Query:  GTF-KIIRAG
        G + K+IR G
Subjt:  GTF-KIIRAG

AT5G60590.1 DHBP synthase RibB-like alpha/beta domain2.9e-3956.79Show/hide
Query:  LPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSF-LKTDWSLEKC--CMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        L  ++A+ L  I    + P    G S     S   ++R  R     K  WSLE+   C+  ++CL  + PA+EA+AQEA +A+K+ KVIAVPTDTLYG A
Subjt:  LPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSF-LKTDWSLEKC--CMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKR
        CDACS EAV RIYEIKGRKLTSPLAICVG V DI R A T HLP GLLDSLLPGPVT+VL+R
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKR

AT5G60590.2 DHBP synthase RibB-like alpha/beta domain2.3e-8963.04Show/hide
Query:  LPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSF-LKTDWSLEKC--CMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        L  ++A+ L  I    + P    G S     S   ++R  R     K  WSLE+   C+  ++CL  + PA+EA+AQEA +A+K+ KVIAVPTDTLYG A
Subjt:  LPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSF-LKTDWSLEKC--CMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACS EAV RIYEIKGRKLTSPLAICVG V DI R A T HLP GLLDSLLPGPVT+VL+RGESS+L+KSLNPG+ +IGVRVPD +FIR +SR S + L
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLE
        ALTSANLSG  SSVCV DFENLWQHCAYVYDGG+LP+GRAGSTIVDLT+ G +KIIR GSA++ T+A L++Y L E
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATACCCGTACTCAGCCGTCCTTCTTCTCCATCTCTCTTCTTCTAAGGCAAACTCGGCGCCGGCCGTATCTCACATTTGCCCAATGCAATTTTTTTGATTTCGAATC
CTTCACAATCCCAAACCTAAGTTTCCAAACACCTCCTACTCTCTCTTCGAAACCCCGCTTTGGATTGCTACCGACCACCATGAACACACTTCCGGCGAAAATGGCTGACA
GTCTCTCTCTAATCAGAACGTTTGCAACTTTTCCCTCTTCTCACCTGGGTTCTTCCAATTATGGGATAGTTTCGTTCTTGCAACGAAATAGAGGATCAAGGGTTAGTTTT
CTTAAAACGGATTGGAGTTTAGAGAAGTGTTGTATGCGTGTGGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTACAGATGCCCTTAA
AGCTGGGAAGGTTATTGCTGTCCCCACTGATACTCTCTATGGACTCGCTTGTGATGCTTGTTCTGCTGAAGCAGTCCATAGGATTTATGAAATTAAAGGACGTAAACTTA
CAAGCCCTCTCGCCATTTGTGTTGGTGGTGTCTCTGATATAACTCGCTATGCTATAACAGACCATTTGCCTTCTGGTTTGCTTGATTCTCTCCTTCCTGGGCCTGTGACT
GTTGTTCTGAAAAGAGGTGAATCGAGTGTTCTTGACAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTCCGTGTACCTGATGCTGACTTTATTCGGCTGATTTCTCG
TAGATCAGAGACAGCATTAGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAAAATCTATGGCAACACTGTGCTTATGTATACG
ATGGGGGTGTTCTTCCTGCTGGACGAGCAGGCTCGACGATCGTTGACCTCACTGAGCGAGGCACATTTAAGATTATAAGAGCTGGAAGCGCAGAGAAGCAGACTATTGCA
ACACTTCAAAGGTATTCACTATTAGAAGCAGCAGCTACTATTTGA
mRNA sequenceShow/hide mRNA sequence
CCCCACTTATGTATACCCGTACTCAGCCGTCCTTCTTCTCCATCTCTCTTCTTCTAAGGCAAACTCGGCGCCGGCCGTATCTCACATTTGCCCAATGCAATTTTTTTGAT
TTCGAATCCTTCACAATCCCAAACCTAAGTTTCCAAACACCTCCTACTCTCTCTTCGAAACCCCGCTTTGGATTGCTACCGACCACCATGAACACACTTCCGGCGAAAAT
GGCTGACAGTCTCTCTCTAATCAGAACGTTTGCAACTTTTCCCTCTTCTCACCTGGGTTCTTCCAATTATGGGATAGTTTCGTTCTTGCAACGAAATAGAGGATCAAGGG
TTAGTTTTCTTAAAACGGATTGGAGTTTAGAGAAGTGTTGTATGCGTGTGGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTACAGAT
GCCCTTAAAGCTGGGAAGGTTATTGCTGTCCCCACTGATACTCTCTATGGACTCGCTTGTGATGCTTGTTCTGCTGAAGCAGTCCATAGGATTTATGAAATTAAAGGACG
TAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGGTGTCTCTGATATAACTCGCTATGCTATAACAGACCATTTGCCTTCTGGTTTGCTTGATTCTCTCCTTCCTGGGC
CTGTGACTGTTGTTCTGAAAAGAGGTGAATCGAGTGTTCTTGACAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTCCGTGTACCTGATGCTGACTTTATTCGGCTG
ATTTCTCGTAGATCAGAGACAGCATTAGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAAAATCTATGGCAACACTGTGCTTA
TGTATACGATGGGGGTGTTCTTCCTGCTGGACGAGCAGGCTCGACGATCGTTGACCTCACTGAGCGAGGCACATTTAAGATTATAAGAGCTGGAAGCGCAGAGAAGCAGA
CTATTGCAACACTTCAAAGGTATTCACTATTAGAAGCAGCAGCTACTATTTGAACATCTGAATCTAGTCATGTTCCTAAGCATCTGTTCATTACCATAGAGGTTCTAAAG
ATTCTTTTGGTAGGGTGAGTTAGAAGGGCTCGTTTCAATTGATTAGAAGAAAAAAATGTTTTTAAAAAAGGTTCTTTTTTTTTTTTTAACTATTTTGATGAAAAGGAGTT
TAAAATAGATTTTAAAAGTGTTTCATTATTTATTTTTAGTGGTTGTCAAACACGTCAACTTTTTTTTTTTTCCCTAAAATGACTTATTTTCAAAATACCAAAACTCAAAC
TAGATAATGTCTAGATTAAGCTTATGGCTTTACCATTTCCTTTTTAACCACTATATTTCCCTTTTTTACTGAAGTTCTTGATTTTGTACGATTATGTAACATTTGGAAAT
GTATTATGATGAGGAATTCACTAATACTTGGAATGAGAAGAACCTTCAAATTTGCTTGCGACTTGTAGTGCAGTGAAGAAAAATATATACAAAATGTGGTGGGATGGATA
GGGTATTAAAATTGGTTTGCATCGAGAAATATTACTAATGTGAATTTAATAAATATTTTTAACTTATAAAGGATGTGTTACGGTGGAGTTGCATTGAAATGGTAGTAATT
GTTTGTGTTTGGAAAGTTAGTATGAATTGTGTCGAGAAAGAAGTCTATGTTTGAG
Protein sequenceShow/hide protein sequence
MYTRTQPSFFSISLLLRQTRRRPYLTFAQCNFFDFESFTIPNLSFQTPPTLSSKPRFGLLPTTMNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSF
LKTDWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVT
VVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIA
TLQRYSLLEAAATI