CuGenDBv2

Gene ID	Pay0000672
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	ATP synthase subunit c, chloroplastic
Genome location	chr07:6994234..6994458
RNA-Seq Expression	Pay0000672
Synteny	Pay0000672
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0008289 - lipid binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	IPR000454 - ATP synthase, F0 complex, subunit C IPR002379 - V-ATPase proteolipid subunit C-like domain IPR005953 - ATP synthase, F0 complex, subunit C, bacterial/chloroplast IPR020537 - ATP synthase, F0 complex, subunit C, DCCD-binding site IPR035921 - F/V-ATP synthase subunit C superfamily IPR038662 - F1F0 ATP synthase subunit C superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AFU95057.1 AtpH, partial [Turnera ulmifolia]

4.1e-25

93.24

Show/hide

Query:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL
        MNPLIS+ASVIAAGLA+GLASIGPGIGQGTAAGQAVEGI RQP+AEGKIRGTL LSLAFMEALTIYGLVVALAL
Subjt:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL

KAF7075394.1 hypothetical protein CFC21_080174 [Triticum aestivum]

3.1e-25

91.89

Show/hide

Query:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL
        MNPLI+ ASVIAAGLA+GLASIGPG+GQGTAAGQAVEGI RQP+AEGKIRGTLFLSLAFMEALTIYGLVVALAL
Subjt:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL

QWW93015.1 ATP synthase CF0 subunit III [Cyathodium smaragdinum]

5.3e-25

93.24

Show/hide

Query:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL
        MNPLIS ASVIAAGLA+GLASIGPGIGQGTAAGQAVEGI RQP+AEGKIRGTL LSLAFMEALTIYGLVVALAL
Subjt:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL

YP_009668295.1 ATP synthase CF0 subunit III [Scapania ciliata]

5.3e-25

93.24

Show/hide

Query:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL
        MNPLIS ASVIAAGLA+GLASIGPGIGQGTAAGQAVEGI RQP+AEGKIRGTL LSLAFMEALTIYGLVVALAL
Subjt:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL

YP_009925616.1 ATP synthase CF0 subunit III [Phlegmariurus carinatus]

5.3e-25

93.24

Show/hide

Query:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL
        MNPLIS ASVIAAGLA+GLASIGPGIGQGTAAGQAVEGI RQP+AEGKIRGTL LSLAFMEALTIYGLVVALAL
Subjt:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL

TrEMBL top hits

e value

%identity

Alignment

A0A0U2SNX2 ATP synthase subunit c, chloroplastic

2.6e-25

93.24

Show/hide

Query:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL
        MNPLIS ASVIAAGLA+GLASIGPGIGQGTAAGQAVEGI RQP+AEGKIRGTL LSLAFMEALTIYGLVVALAL
Subjt:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL

A0A0U2UJ76 ATP synthase subunit c, chloroplastic

2.6e-25

93.24

Show/hide

Query:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL
        MNPLIS ASVIAAGLA+GLASIGPGIGQGTAAGQAVEGI RQP+AEGKIRGTL LSLAFMEALTIYGLVVALAL
Subjt:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL

A0A218KG23 ATP synthase subunit c, chloroplastic

2.6e-25

93.24

Show/hide

Query:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL
        MNPLIS ASVIAAGLA+GLASIGPGIGQGTAAGQAVEGI RQP+AEGKIRGTL LSLAFMEALTIYGLVVALAL
Subjt:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL

K4KL80 ATP synthase subunit c, chloroplastic (Fragment)

2.0e-25

93.24

Show/hide

Query:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL
        MNPLIS+ASVIAAGLA+GLASIGPGIGQGTAAGQAVEGI RQP+AEGKIRGTL LSLAFMEALTIYGLVVALAL
Subjt:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL

U6A3L6 ATP synthase F0 sector subunit C

2.6e-25

93.24

Show/hide

Query:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL
        MNPLIS ASVIAAGLA+GLASIGPGIGQGTAAGQAVEGI RQP+AEGKIRGTL LSLAFMEALTIYGLVVALAL
Subjt:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL

SwissProt top hits

e value

%identity

Alignment

A8SE66 ATP synthase subunit c, chloroplastic

7.0e-28

91.89

Show/hide

Query:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL
        MNPLIS+ASVIAAGLA+GLASIGPG+GQGTAAGQAVEGI RQP+AEGKIRGTL LSLAFMEALTIYGLVVALAL
Subjt:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL

B0Z4N0 ATP synthase subunit c, chloroplastic

7.0e-28

93.24

Show/hide

Query:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL
        MNPLIS ASVIAAGLA+GLASIGPGIGQGTAAGQAVEGI RQP+AEGKIRGTL LSLAFMEALTIYGLVVALAL
Subjt:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL

B0Z4W4 ATP synthase subunit c, chloroplastic

7.0e-28

93.24

Show/hide

Query:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL
        MNPLIS ASVIAAGLA+GLASIGPGIGQGTAAGQAVEGI RQP+AEGKIRGTL LSLAFMEALTIYGLVVALAL
Subjt:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL

P62481 ATP synthase subunit c, chloroplastic

7.0e-28

93.24

Show/hide

Query:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL
        MNPLIS ASVIAAGLA+GLASIGPGIGQGTAAGQAVEGI RQP+AEGKIRGTL LSLAFMEALTIYGLVVALAL
Subjt:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL

Q6WQW2 ATP synthase subunit c, chloroplastic

7.0e-28

93.24

Show/hide

Query:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL
        MNPLIS ASVIAAGLA+GLASIGPGIGQGTAAGQAVEGI RQP+AEGKIRGTL LSLAFMEALTIYGLVVALAL
Subjt:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00140.1 ATP synthase subunit C family protein

8.5e-29

90.54

Show/hide

Query:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL
        MNPL+S ASVIAAGLA+GLASIGPG+GQGTAAGQAVEGI RQP+AEGKIRGTL LSLAFMEALTIYGLVVALAL
Subjt:  MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAATCCACTGATTTCTACCGCTTCCGTTATTGCTGCTGGGTTGGCCATCGGGCTTGCTTCTATTGGACCTGGGATTGGTCAAGGTACTGCTGCGGGCCAAGCTGTAGA
AGGGATCACGAGACAACCCAAGGCGGAGGGAAAAATCCGAGGTACTTTATTTCTTAGTCTGGCTTTTATGGAAGCTTTAACAATTTATGGATTGGTTGTAGCATTAGCAC
TTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MNPLISTASVIAAGLAIGLASIGPGIGQGTAAGQAVEGITRQPKAEGKIRGTLFLSLAFMEALTIYGLVVALAL

Pay0000672 (gene) of Melon (Payzawat) v1 genome