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Pay0000680 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0000680
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionProtein ROOT HAIR DEFECTIVE 3 homolog
Genome locationchr11:24121238..24122653
RNA-Seq ExpressionPay0000680
SyntenyPay0000680
Gene Ontology termsGO:0016320 - endoplasmic reticulum membrane fusion (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34108.1 protein SEY1 [Cucumis melo subsp. melo]8.6e-1242.31Show/hide
Query:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK-----------------------------------------
        W HDIGREQAA KP LKTVFQ                      TPL+NL+PVLREDV+K                                         
Subjt:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK-----------------------------------------

Query:  --EDWLRLEEEVQSDPGQGFGKKLSLTINT
          EDWLRLEEEVQS P QGFGKKLS  INT
Subjt:  --EDWLRLEEEVQSDPGQGFGKKLSLTINT

CAA0332036.1 unnamed protein product [Arabidopsis thaliana]2.0e-0881.58Show/hide
Query:  RWYHDIGREQAAIKPFLKTVFQTPLKNLKPVLREDVKK
        RW HDIGREQAA KP LKTVFQTPL+NL+PVLRED++K
Subjt:  RWYHDIGREQAAIKPFLKTVFQTPLKNLKPVLREDVKK

KVH97948.1 Root hair defective 3 GTP-binding, partial [Cynara cardunculus var. scolymus]5.8e-0883.78Show/hide
Query:  WYHDIGREQAAIKPFLKTVFQTPLKNLKPVLREDVKK
        W HDIGREQAA KP LKTVFQTPL+NL+PVLREDV+K
Subjt:  WYHDIGREQAAIKPFLKTVFQTPLKNLKPVLREDVKK

RXH67385.1 hypothetical protein DVH24_027532 [Malus domestica]7.5e-0881.08Show/hide
Query:  WYHDIGREQAAIKPFLKTVFQTPLKNLKPVLREDVKK
        W HDIGREQAA KP LKTVFQTPL+NL+PVLRED++K
Subjt:  WYHDIGREQAAIKPFLKTVFQTPLKNLKPVLREDVKK

VYS50857.1 unnamed protein product [Arabidopsis thaliana]2.0e-0881.58Show/hide
Query:  RWYHDIGREQAAIKPFLKTVFQTPLKNLKPVLREDVKK
        RW HDIGREQAA KP LKTVFQTPL+NL+PVLRED++K
Subjt:  RWYHDIGREQAAIKPFLKTVFQTPLKNLKPVLREDVKK

TrEMBL top hitse value%identityAlignment
A0A103XW38 Root hair defective 3 GTP-binding (Fragment)2.8e-0883.78Show/hide
Query:  WYHDIGREQAAIKPFLKTVFQTPLKNLKPVLREDVKK
        W HDIGREQAA KP LKTVFQTPL+NL+PVLREDV+K
Subjt:  WYHDIGREQAAIKPFLKTVFQTPLKNLKPVLREDVKK

A0A5S9WTV6 Uncharacterized protein9.6e-0981.58Show/hide
Query:  RWYHDIGREQAAIKPFLKTVFQTPLKNLKPVLREDVKK
        RW HDIGREQAA KP LKTVFQTPL+NL+PVLRED++K
Subjt:  RWYHDIGREQAAIKPFLKTVFQTPLKNLKPVLREDVKK

A0A654ENI9 Uncharacterized protein9.6e-0981.58Show/hide
Query:  RWYHDIGREQAAIKPFLKTVFQTPLKNLKPVLREDVKK
        RW HDIGREQAA KP LKTVFQTPL+NL+PVLRED++K
Subjt:  RWYHDIGREQAAIKPFLKTVFQTPLKNLKPVLREDVKK

E5GCA9 Protein SEY14.2e-1242.31Show/hide
Query:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK-----------------------------------------
        W HDIGREQAA KP LKTVFQ                      TPL+NL+PVLREDV+K                                         
Subjt:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK-----------------------------------------

Query:  --EDWLRLEEEVQSDPGQGFGKKLSLTINT
          EDWLRLEEEVQS P QGFGKKLS  INT
Subjt:  --EDWLRLEEEVQSDPGQGFGKKLSLTINT

K3ZDP1 GB1/RHD3-type G domain-containing protein1.9e-1251.19Show/hide
Query:  WYHDIGREQAAIKPFLKTVFQTPLKNLKPVLREDVKK--------------------EDWLRLEEEVQSDPGQGFGKKLSLTIN
        W HDIGREQAA KP LKTVFQTPL++L+PVLRED++K                     +WL LE  VQS P  GFGKKL   ++
Subjt:  WYHDIGREQAAIKPFLKTVFQTPLKNLKPVLREDVKK--------------------EDWLRLEEEVQSDPGQGFGKKLSLTIN

SwissProt top hitse value%identityAlignment
P93042 Protein ROOT HAIR DEFECTIVE 36.6e-0750.85Show/hide
Query:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK
        W HDIGREQAA KP LKTVFQ                      TPL+NL+PVLRED++K
Subjt:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK

Q0JLS6 Protein ROOT HAIR DEFECTIVE 38.6e-0749.15Show/hide
Query:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK
        W HDIGREQAA KP LKTVFQ                      TPL+NL+P+LRED++K
Subjt:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK

Q2QMH2 Protein ROOT HAIR DEFECTIVE 3 homolog 12.5e-0649.15Show/hide
Query:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK
        W HDIGREQAA KP LKTVFQ                      TPL++L+PVLRED++K
Subjt:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK

Q9FKE9 Protein ROOT HAIR DEFECTIVE 3 homolog 24.0e-0444.07Show/hide
Query:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK
        W HDIGREQAA KP LKTVFQ                      TP++ L+  LRED++K
Subjt:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK

Q9SSN0 Protein ROOT HAIR DEFECTIVE 3 homolog 16.6e-0750.85Show/hide
Query:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK
        W HDIGREQAA KP LKTVFQ                      TPL+NL+PVLRED++K
Subjt:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK

Arabidopsis top hitse value%identityAlignment
AT1G72960.1 Root hair defective 3 GTP-binding protein (RHD3)4.7e-0850.85Show/hide
Query:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK
        W HDIGREQAA KP LKTVFQ                      TPL+NL+PVLRED++K
Subjt:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK

AT3G13870.1 Root hair defective 3 GTP-binding protein (RHD3)4.7e-0850.85Show/hide
Query:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK
        W HDIGREQAA KP LKTVFQ                      TPL+NL+PVLRED++K
Subjt:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK

AT3G13870.2 Root hair defective 3 GTP-binding protein (RHD3)4.7e-0850.85Show/hide
Query:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK
        W HDIGREQAA KP LKTVFQ                      TPL+NL+PVLRED++K
Subjt:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK

AT5G45160.1 Root hair defective 3 GTP-binding protein (RHD3)2.9e-0544.07Show/hide
Query:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK
        W HDIGREQAA KP LKTVFQ                      TP++ L+  LRED++K
Subjt:  WYHDIGREQAAIKPFLKTVFQ----------------------TPLKNLKPVLREDVKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTTTTAAAGGGAGGTGGTATCACGATATTGGCCGTGAGCAGGCTGCAATTAAGCCTTTCCTCAAAACTGTATTTCAGACACCATTGAAAAATTTAAAGCCTGT
TCTTAGAGAGGATGTAAAGAAGGAGGACTGGTTGAGGTTAGAAGAAGAAGTACAGTCCGATCCAGGTCAAGGTTTTGGAAAGAAGCTAAGTTTGACCATCAATACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCTTTTAAAGGGAGGTGGTATCACGATATTGGCCGTGAGCAGGCTGCAATTAAGCCTTTCCTCAAAACTGTATTTCAGACACCATTGAAAAATTTAAAGCCTGT
TCTTAGAGAGGATGTAAAGAAGGAGGACTGGTTGAGGTTAGAAGAAGAAGTACAGTCCGATCCAGGTCAAGGTTTTGGAAAGAAGCTAAGTTTGACCATCAATACATGA
Protein sequenceShow/hide protein sequence
MDAFKGRWYHDIGREQAAIKPFLKTVFQTPLKNLKPVLREDVKKEDWLRLEEEVQSDPGQGFGKKLSLTINT