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Pay0000687 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0000687
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr06:21996638..21997123
RNA-Seq ExpressionPay0000687
SyntenyPay0000687
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006886 - intracellular protein transport (biological process)
GO:0007033 - vacuole organization (biological process)
GO:0015074 - DNA integration (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004601 - peroxidase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032862.1 reverse transcriptase [Cucumis melo var. makuwa]1.7e-6375.16Show/hide
Query:  NHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEG-IEVDPEKIRVIKEWPVPTNVREMHGFLGL
        N   KPYL+RFVLVFFDDILVYSQG+ EHV HLEVVLGLLKE ELY NLEKCSFAKPR GYLGHFIS++G I+VDPEKIR + EWP  TNV+E+ GFLGL
Subjt:  NHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEG-IEVDPEKIRVIKEWPVPTNVREMHGFLGL

Query:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI
        TGYYR F+KDYGT+AA  T LL TG YKWN EAE AF+K K  MMTLP LAMP F+LPF+I
Subjt:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI

KAA0042902.1 peroxidase 64 [Cucumis melo var. makuwa]1.3e-8193.17Show/hide
Query:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL
        MNH  KPYLRRFV VFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPR GYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREM GFLGL
Subjt:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL

Query:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI
        TGYYRWFIKDYGTMAAS TLLL TGGYKWN+EAEVAFEKPKMDMMTLP LAMP FHLPF+I
Subjt:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI

KAA0053639.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.8e-6373.91Show/hide
Query:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL
        MN   KPYLRRFVLVFFDDILVYSQG+ EH+ HLEVVLGLLKE ELY NLEKCSFAKPR  YLGHFISE+GIE  PEKIR + EWP PTNVRE+ GFLGL
Subjt:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL

Query:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI
        TGYYR F+KDYG +AA  T LL  G YKW+ E E AF+K K  MMTLP LAMP F+LPF+I
Subjt:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI

KAA0067256.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.5e-6475.78Show/hide
Query:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL
        MN   KPYLRRFVLVFFDDILVYSQG+ EHV HLEVVLGLLKE ELY NLEKCSFAKPR  YLGHFISE+GIE DPEKIR + EWP PTNVRE+ GFLGL
Subjt:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL

Query:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI
        TGYYR F+KDYG +AA  T LL  G YKW+ EAE AF K K  MMTLP LAMP F+LPF+I
Subjt:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI

XP_016900831.1 PREDICTED: uncharacterized mitochondrial protein AtMg00860-like [Cucumis melo]3.2e-8395.03Show/hide
Query:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL
        MNH  KPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREM GFLGL
Subjt:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL

Query:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI
        TGYYR FIKDYGTMAAS TLLLMTGGYKWNKEAEVAFEK KMDMMTLPAL MPGFHLPF+I
Subjt:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI

TrEMBL top hitse value%identityAlignment
A0A1S4DXX1 uncharacterized mitochondrial protein AtMg00860-like1.6e-8395.03Show/hide
Query:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL
        MNH  KPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREM GFLGL
Subjt:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL

Query:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI
        TGYYR FIKDYGTMAAS TLLLMTGGYKWNKEAEVAFEK KMDMMTLPAL MPGFHLPF+I
Subjt:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI

A0A5A7SP02 Reverse transcriptase8.0e-6475.16Show/hide
Query:  NHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEG-IEVDPEKIRVIKEWPVPTNVREMHGFLGL
        N   KPYL+RFVLVFFDDILVYSQG+ EHV HLEVVLGLLKE ELY NLEKCSFAKPR GYLGHFIS++G I+VDPEKIR + EWP  TNV+E+ GFLGL
Subjt:  NHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEG-IEVDPEKIRVIKEWPVPTNVREMHGFLGL

Query:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI
        TGYYR F+KDYGT+AA  T LL TG YKWN EAE AF+K K  MMTLP LAMP F+LPF+I
Subjt:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI

A0A5A7UJK0 Ty3/gypsy retrotransposon protein1.4e-6373.91Show/hide
Query:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL
        MN   KPYLRRFVLVFFDDILVYSQG+ EH+ HLEVVLGLLKE ELY NLEKCSFAKPR  YLGHFISE+GIE  PEKIR + EWP PTNVRE+ GFLGL
Subjt:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL

Query:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI
        TGYYR F+KDYG +AA  T LL  G YKW+ E E AF+K K  MMTLP LAMP F+LPF+I
Subjt:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI

A0A5A7VLC6 Ty3/gypsy retrotransposon protein7.3e-6575.78Show/hide
Query:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL
        MN   KPYLRRFVLVFFDDILVYSQG+ EHV HLEVVLGLLKE ELY NLEKCSFAKPR  YLGHFISE+GIE DPEKIR + EWP PTNVRE+ GFLGL
Subjt:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL

Query:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI
        TGYYR F+KDYG +AA  T LL  G YKW+ EAE AF K K  MMTLP LAMP F+LPF+I
Subjt:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI

A0A5D3C1Z4 Peroxidase 646.5e-8293.17Show/hide
Query:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL
        MNH  KPYLRRFV VFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPR GYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREM GFLGL
Subjt:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL

Query:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI
        TGYYRWFIKDYGTMAAS TLLL TGGYKWN+EAEVAFEKPKMDMMTLP LAMP FHLPF+I
Subjt:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.62.2e-2639.26Show/hide
Query:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL
        MN  L+P L +  LV+ DDI+V+S  L EH+  L +V   L +  L + L+KC F K  T +LGH ++ +GI+ +PEKI  I+++P+PT  +E+  FLGL
Subjt:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL

Query:  TGYYRWFIKDYGTMAASPTLLLMTGGY--KWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI
        TGYYR FI ++  +A   T  L         N E + AF+K K  +   P L +P F   F +
Subjt:  TGYYRWFIKDYGTMAASPTLLLMTGGY--KWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI

P10401 Retrovirus-related Pol polyprotein from transposon gypsy2.0e-1936.07Show/hide
Query:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL
        ++  L+  + +   V+ DD++++S+   +HV H++ VL  L +  + V+ EK  F K    YLG  +S++G + DPEK++ I+E+P P  V ++  FLGL
Subjt:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL

Query:  TGYYRWFIKDYGTMAASPTLLL
          YYR FIKD+  +A   T +L
Subjt:  TGYYRWFIKDYGTMAASPTLLL

P20825 Retrovirus-related Pol polyprotein from transposon 2972.9e-2637.27Show/hide
Query:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL
        MN+ L+P L +  LV+ DDI+++S  L EH++ +++V   L +  L + L+KC F K    +LGH ++ +GI+ +P K++ I  +P+PT  +E+  FLGL
Subjt:  MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGL

Query:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEV--AFEKPKMDMMTLPALAMPGFHLPF
        TGYYR FI +Y  +A   T  L        ++ E   AFEK K  ++  P L +P F   F
Subjt:  TGYYRWFIKDYGTMAASPTLLLMTGGYKWNKEAEV--AFEKPKMDMMTLPALAMPGFHLPF

P92523 Uncharacterized mitochondrial protein AtMg008604.0e-2844.27Show/hide
Query:  VHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLG--HFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGLTGYYRWFIKDYGTMAASPTLLLMTGGYK
        ++HL +VL + ++++ Y N +KC+F +P+  YLG  H IS EG+  DP K+  +  WP P N  E+ GFLGLTGYYR F+K+YG +    T LL     K
Subjt:  VHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLG--HFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGLTGYYRWFIKDYGTMAASPTLLLMTGGYK

Query:  WNKEAEVAFEKPKMDMMTLPALAMPGFHLPF
        W + A +AF+  K  + TLP LA+P   LPF
Subjt:  WNKEAEVAFEKPKMDMMTLPALAMPGFHLPF

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus1.6e-2135.29Show/hide
Query:  LKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGLTGYY
        L+ ++ +   V+ DDI+V+S+    H  +L +VL  L +  L VNLEK  F   +  +LG+ ++ +GI+ DP+K+R I E P PT+V+E+  FLG+T YY
Subjt:  LKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGLTGYY

Query:  RWFIKDYGTMAASPTLLLMTGGY---KWNKEAEV----------AFEKPKMDMMTLPALAMPGFHLPFKI
        R FI+DY  + A P   L  G Y   K ++ ++V          +F   K  + +   LA P F  PF +
Subjt:  RWFIKDYGTMAASPTLLLMTGGY---KWNKEAEV----------AFEKPKMDMMTLPALAMPGFHLPFKI

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein2.8e-2944.27Show/hide
Query:  VHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLG--HFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGLTGYYRWFIKDYGTMAASPTLLLMTGGYK
        ++HL +VL + ++++ Y N +KC+F +P+  YLG  H IS EG+  DP K+  +  WP P N  E+ GFLGLTGYYR F+K+YG +    T LL     K
Subjt:  VHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLG--HFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGLTGYYRWFIKDYGTMAASPTLLLMTGGYK

Query:  WNKEAEVAFEKPKMDMMTLPALAMPGFHLPF
        W + A +AF+  K  + TLP LA+P   LPF
Subjt:  WNKEAEVAFEKPKMDMMTLPALAMPGFHLPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCATGCACTCAAGCCATATTTGCGGAGGTTTGTTCTTGTATTTTTTGACGACATTTTAGTCTATAGTCAAGGGTTGATTGAACATGTGCATCACTTGGAGGTGGT
CTTAGGATTGCTGAAGGAGAATGAGTTATACGTGAACCTGGAGAAGTGCAGCTTTGCCAAGCCACGAACCGGGTACTTAGGCCACTTTATATCGGAGGAAGGCATAGAGG
TGGACCCAGAAAAGATCAGGGTTATCAAGGAATGGCCGGTACCCACTAACGTACGAGAAATGCATGGATTCTTGGGACTGACAGGCTACTACCGGTGGTTTATTAAAGAC
TACGGTACTATGGCCGCCTCCCCGACCCTGCTGCTAATGACGGGAGGTTACAAATGGAATAAGGAGGCAGAGGTCGCCTTTGAAAAACCAAAAATGGACATGATGACACT
CCCCGCGCTGGCCATGCCTGGTTTTCACCTGCCTTTTAAGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATCATGCACTCAAGCCATATTTGCGGAGGTTTGTTCTTGTATTTTTTGACGACATTTTAGTCTATAGTCAAGGGTTGATTGAACATGTGCATCACTTGGAGGTGGT
CTTAGGATTGCTGAAGGAGAATGAGTTATACGTGAACCTGGAGAAGTGCAGCTTTGCCAAGCCACGAACCGGGTACTTAGGCCACTTTATATCGGAGGAAGGCATAGAGG
TGGACCCAGAAAAGATCAGGGTTATCAAGGAATGGCCGGTACCCACTAACGTACGAGAAATGCATGGATTCTTGGGACTGACAGGCTACTACCGGTGGTTTATTAAAGAC
TACGGTACTATGGCCGCCTCCCCGACCCTGCTGCTAATGACGGGAGGTTACAAATGGAATAAGGAGGCAGAGGTCGCCTTTGAAAAACCAAAAATGGACATGATGACACT
CCCCGCGCTGGCCATGCCTGGTTTTCACCTGCCTTTTAAGATTTAG
Protein sequenceShow/hide protein sequence
MNHALKPYLRRFVLVFFDDILVYSQGLIEHVHHLEVVLGLLKENELYVNLEKCSFAKPRTGYLGHFISEEGIEVDPEKIRVIKEWPVPTNVREMHGFLGLTGYYRWFIKD
YGTMAASPTLLLMTGGYKWNKEAEVAFEKPKMDMMTLPALAMPGFHLPFKI