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Pay0000875 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0000875
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPol polyprotein
Genome locationchr01:10296188..10296584
RNA-Seq ExpressionPay0000875
SyntenyPay0000875
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048414.1 uncharacterized protein E6C27_scaffold264G001400 [Cucumis melo var. makuwa]7.3e-3469.44Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYD
        M+S LNRPFRFEGAHFK WKQKM FFLTLKK    CTT+K  +  K+ T+E++ +   WTE+DFIC NLILNGL +E YDYYSTM+  KEVWDALQKKYD
Subjt:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYD

Query:  TEEAESKK
        TEEA SKK
Subjt:  TEEAESKK

KAA0048760.1 pol polyprotein [Cucumis melo var. makuwa]3.8e-5194.39Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKMFFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYDT
        MTSYLNRPFRFEGAHFKGWKQKMFFLTLKKA ATCTTKK+TIPT+NSTKEEIGSCDAWTESDFICNNLI NGLIDE YDYYSTMSPAKEVWDALQKKY+T
Subjt:  MTSYLNRPFRFEGAHFKGWKQKMFFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYDT

Query:  EEAESKK
        EEAESKK
Subjt:  EEAESKK

KAA0050409.1 hypothetical protein E6C27_scaffold1166G00260 [Cucumis melo var. makuwa]1.5e-3470.37Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYD
        M+S LNRPFRFEGAHFK WKQKM FFLTLKK    CTT+K  +  K+ TKE++ +   WTE+DFIC NLILNGL DE YDYYSTM+ AK+VW+ALQKKYD
Subjt:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYD

Query:  TEEAESKK
        TEEA SKK
Subjt:  TEEAESKK

KAA0055814.1 hypothetical protein E6C27_scaffold181G002040 [Cucumis melo var. makuwa]1.9e-3471.3Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYD
        M+S  NRPFRFEGA+FK WKQKM FFLTLKK T  CTT+KS +  K+ T+E++ +   WTE+DFIC NLILNGL DE YDYYSTM+ AKEVWDALQKKYD
Subjt:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYD

Query:  TEEAESKK
        TEEA SKK
Subjt:  TEEAESKK

TYJ98000.1 hypothetical protein E5676_scaffold487G00230 [Cucumis melo var. makuwa]7.3e-3469.44Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYD
        M+S LNRPFRFEGAHFK WKQKM FFLTLKK    CT +K  +  K+ TKE++ +   WTE+DFIC NLILNGL DE YDYYSTM+ AK+VW+ALQKKYD
Subjt:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYD

Query:  TEEAESKK
        TEEA SKK
Subjt:  TEEAESKK

TrEMBL top hitse value%identityAlignment
A0A5A7U031 Pol polyprotein1.9e-5194.39Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKMFFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYDT
        MTSYLNRPFRFEGAHFKGWKQKMFFLTLKKA ATCTTKK+TIPT+NSTKEEIGSCDAWTESDFICNNLI NGLIDE YDYYSTMSPAKEVWDALQKKY+T
Subjt:  MTSYLNRPFRFEGAHFKGWKQKMFFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYDT

Query:  EEAESKK
        EEAESKK
Subjt:  EEAESKK

A0A5A7UA92 Uncharacterized protein7.1e-3570.37Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYD
        M+S LNRPFRFEGAHFK WKQKM FFLTLKK    CTT+K  +  K+ TKE++ +   WTE+DFIC NLILNGL DE YDYYSTM+ AK+VW+ALQKKYD
Subjt:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYD

Query:  TEEAESKK
        TEEA SKK
Subjt:  TEEAESKK

A0A5D3BDS3 Uncharacterized protein3.5e-3469.44Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYD
        M+S LNRPFRFEGAHFK WKQKM FFLTLKK    CT +K  +  K+ TKE++ +   WTE+DFIC NLILNGL DE YDYYSTM+ AK+VW+ALQKKYD
Subjt:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYD

Query:  TEEAESKK
        TEEA SKK
Subjt:  TEEAESKK

A0A5D3BEH3 Uncharacterized protein3.5e-3469.44Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYD
        M+S LNRPFRFEGAHFK WKQKM FFLTLKK    CTT+K  +  K+ T+E++ +   WTE+DFIC NLILNGL +E YDYYSTM+  KEVWDALQKKYD
Subjt:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYD

Query:  TEEAESKK
        TEEA SKK
Subjt:  TEEAESKK

A0A5D3CEV3 Uncharacterized protein9.3e-3571.3Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYD
        M+S  NRPFRFEGA+FK WKQKM FFLTLKK T  CTT+KS +  K+ T+E++ +   WTE+DFIC NLILNGL DE YDYYSTM+ AKEVWDALQKKYD
Subjt:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYD

Query:  TEEAESKK
        TEEA SKK
Subjt:  TEEAESKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G00980.1 zinc knuckle (CCHC-type) family protein7.6e-0530.84Show/hide
Query:  RFEGAHFKGWKQKM-FFLTLKKATATCTTKKSTIPTK---NSTKEEIGSCDA----WTESDFICNNLILNGLIDEFYDYYS-TMSPAKEVWDALQKKYDT
        RF+G  +  W  +M  FL   K T   +    +I +     +   EI   DA    W   D++C   ++N L D  Y  YS     AKE+WD L+  Y  
Subjt:  RFEGAHFKGWKQKM-FFLTLKKATATCTTKKSTIPTK---NSTKEEIGSCDA----WTESDFICNNLILNGLIDEFYDYYS-TMSPAKEVWDALQKKYDT

Query:  EEAESKK
        +E++SK+
Subjt:  EEAESKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTCATATCTCAACCGACCATTCCGCTTTGAAGGAGCTCATTTCAAGGGCTGGAAACAAAAGATGTTCTTCTTAACCTTGAAGAAAGCTACCGCCACTTGCACTAC
TAAAAAATCGACAATTCCAACTAAAAATTCAACTAAGGAGGAGATCGGGAGTTGTGATGCATGGACAGAGTCAGATTTCATATGTAATAATTTAATTCTGAATGGACTTA
TTGATGAGTTTTATGATTACTACAGTACCATGTCCCCCGCGAAAGAAGTTTGGGATGCATTGCAAAAGAAGTACGACACAGAAGAGGCCGAATCCAAAAAGATTTTAAGA
ATACTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCTCATATCTCAACCGACCATTCCGCTTTGAAGGAGCTCATTTCAAGGGCTGGAAACAAAAGATGTTCTTCTTAACCTTGAAGAAAGCTACCGCCACTTGCACTAC
TAAAAAATCGACAATTCCAACTAAAAATTCAACTAAGGAGGAGATCGGGAGTTGTGATGCATGGACAGAGTCAGATTTCATATGTAATAATTTAATTCTGAATGGACTTA
TTGATGAGTTTTATGATTACTACAGTACCATGTCCCCCGCGAAAGAAGTTTGGGATGCATTGCAAAAGAAGTACGACACAGAAGAGGCCGAATCCAAAAAGATTTTAAGA
ATACTCTAA
Protein sequenceShow/hide protein sequence
MTSYLNRPFRFEGAHFKGWKQKMFFLTLKKATATCTTKKSTIPTKNSTKEEIGSCDAWTESDFICNNLILNGLIDEFYDYYSTMSPAKEVWDALQKKYDTEEAESKKILR
IL