CuGenDBv2

Gene ID	Pay0001005
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	chr06:18111296..18112000
RNA-Seq Expression	Pay0001005
Synteny	Pay0001005
Gene Ontology terms	GO:0016020 - membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0026071.1 uncharacterized protein E6C27_scaffold581G00620 [Cucumis melo var. makuwa]

4.4e-74

64.53

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Query:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC
        MV+EVLSRMLN                LTHLTFADDLMIFCAADE S+ F+R  LQKFGELSGLF N  KSSIFVAGV+NE+ SH+AT +GF  GNLP+ 
Subjt:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC

Query:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE
        YLGLPLL+GRL  NDC P IQRIT++I SW  R                   VYW SVFVL   VH+EVDKILR YLWRGK+EGRGG+KVAWV+V LPFE
Subjt:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE

Query:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA
        EG   IRDGPSWNI STLKIL +MLT+ GSLWVA
Subjt:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA

KAA0059752.1 F17F8.5 [Cucumis melo var. makuwa]

1.3e-73

64.53

Show/hide

Query:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC
        MV+EVLSRMLN                LT+LTFADDLMIFCAADEPS+ F+R+ LQKFGELSGLF N  KSSIFVAGV+NE+ SH+A  +GF  GNLP+ 
Subjt:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC

Query:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE
        YLGLPLL+GRL  ND  P IQRIT+RI SWT R                   VYW SVFVL   VHHEVDKIL  YLWRGK+EGRGG+KVAWV+V LPFE
Subjt:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE

Query:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA
        E  L IRDGPSWNI STLKIL +MLT+ GSLWVA
Subjt:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA

KAA0062318.1 uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]

2.6e-74

64.96

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Query:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC
        MV+EVLSRMLN                LTHLTFADDLMIFCAA+EPS+ F+R+ LQKFGELSGLF N  KSSIFVAGV+NE+ SH+AT +GF  GNL + 
Subjt:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC

Query:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE
        YLGLPLL+GRL  ND  P IQRIT+RI SWT R                   VYW SVFVL   VH+EVDKILR YLWRGK+EGRGG+KVAWV+V LPFE
Subjt:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE

Query:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA
        EG L IRDGPSWNI STLKIL +MLT+ GSLWVA
Subjt:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA

TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]

2.2e-73

64.53

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Query:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC
        MV+EVLSRMLN                LTHLTFADDLMIFCAADE S+ F+R  LQKFGELSGLF N  KSSIFVAGV+NE+ SH+A  +GF  GNL + 
Subjt:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC

Query:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE
        YLGLPLL+GRL  NDC P IQRIT++I SWT R                   VYW SVFVL   VH+EVDKILR YLWRGK+EGRGG+KVAWV+V LPFE
Subjt:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE

Query:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA
        EG L IRDGPSWNI STLKIL +MLT+ GSLWVA
Subjt:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA

TYK28099.1 uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa]

4.4e-74

64.53

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Query:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC
        MV+EVLSRMLN                LTHLTFADDLMIFCAADE S+ F+R  LQKFGELSGLF N  KSSIFVAGV+NE+ SH+AT +GF  GNLP+ 
Subjt:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC

Query:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE
        YLGLPLL+GRL  NDC P IQRIT++I SW  R                   VYW SVFVL   VH+EVDKILR YLWRGK+EGRGG+KVAWV+V LPFE
Subjt:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE

Query:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA
        EG   IRDGPSWNI STLKIL +MLT+ GSLWVA
Subjt:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPE5 Reverse transcriptase domain-containing protein

2.1e-74

64.53

Show/hide

Query:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC
        MV+EVLSRMLN                LTHLTFADDLMIFCAADE S+ F+R  LQKFGELSGLF N  KSSIFVAGV+NE+ SH+AT +GF  GNLP+ 
Subjt:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC

Query:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE
        YLGLPLL+GRL  NDC P IQRIT++I SW  R                   VYW SVFVL   VH+EVDKILR YLWRGK+EGRGG+KVAWV+V LPFE
Subjt:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE

Query:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA
        EG   IRDGPSWNI STLKIL +MLT+ GSLWVA
Subjt:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA

A0A5A7TWG5 Reverse transcriptase domain-containing protein

1.1e-73

64.53

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Query:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC
        MV+EVLSRMLN                LTHLTFADDLMIFCAADE S+ F+R  LQKFGELSGLF N  KSSIFVAGV+NE+ SH+A  +GF  GNL + 
Subjt:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC

Query:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE
        YLGLPLL+GRL  NDC P IQRIT++I SWT R                   VYW SVFVL   VH+EVDKILR YLWRGK+EGRGG+KVAWV+V LPFE
Subjt:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE

Query:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA
        EG L IRDGPSWNI STLKIL +MLT+ GSLWVA
Subjt:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA

A0A5A7UV01 F17F8.5

6.2e-74

64.53

Show/hide

Query:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC
        MV+EVLSRMLN                LT+LTFADDLMIFCAADEPS+ F+R+ LQKFGELSGLF N  KSSIFVAGV+NE+ SH+A  +GF  GNLP+ 
Subjt:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC

Query:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE
        YLGLPLL+GRL  ND  P IQRIT+RI SWT R                   VYW SVFVL   VHHEVDKIL  YLWRGK+EGRGG+KVAWV+V LPFE
Subjt:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE

Query:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA
        E  L IRDGPSWNI STLKIL +MLT+ GSLWVA
Subjt:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA

A0A5A7V3Z0 Reverse transcriptase domain-containing protein

1.3e-74

64.96

Show/hide

Query:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC
        MV+EVLSRMLN                LTHLTFADDLMIFCAA+EPS+ F+R+ LQKFGELSGLF N  KSSIFVAGV+NE+ SH+AT +GF  GNL + 
Subjt:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC

Query:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE
        YLGLPLL+GRL  ND  P IQRIT+RI SWT R                   VYW SVFVL   VH+EVDKILR YLWRGK+EGRGG+KVAWV+V LPFE
Subjt:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE

Query:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA
        EG L IRDGPSWNI STLKIL +MLT+ GSLWVA
Subjt:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA

A0A5D3DXE4 Reverse transcriptase domain-containing protein

2.1e-74

64.53

Show/hide

Query:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC
        MV+EVLSRMLN                LTHLTFADDLMIFCAADE S+ F+R  LQKFGELSGLF N  KSSIFVAGV+NE+ SH+AT +GF  GNLP+ 
Subjt:  MVIEVLSRMLN---------------NLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLC

Query:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE
        YLGLPLL+GRL  NDC P IQRIT++I SW  R                   VYW SVFVL   VH+EVDKILR YLWRGK+EGRGG+KVAWV+V LPFE
Subjt:  YLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFE

Query:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA
        EG   IRDGPSWNI STLKIL +MLT+ GSLWVA
Subjt:  EGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

6.9e-17

35.22

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Query:  VAGVSNEDTSHIATSLGFFLGNLPLCYLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILR
        +AGV + D + I  S  F  G LP+ YLGLPLL+ ++  +D GP +++I  RI  WT R                    +W S F L ++   E+D I  
Subjt:  VAGVSNEDTSHIATSLGFFLGNLPLCYLGLPLLSGRLHPNDCGPFIQRITNRIHSWTVR-------------------VYWGSVFVLTTSVHHEVDKILR

Query:  FYLWRGKKEGRGGVKVAWVEVYLPFEEGRLDIRDGPSWNIVSTLKILGVMLTSLGS-LW
         +LW G +      KVAW +V  P +EG L IR     N  S   I G   T+LGS +W
Subjt:  FYLWRGKKEGRGGVKVAWVEVYLPFEEGRLDIRDGPSWNIVSTLKILGVMLTSLGS-LW

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTGATAGAGGTTCTTTCTCGTATGCTAAATAACTTAACTCATCTGACCTTTGCTGATGATCTTATGATATTTTGTGCTGCTGATGAGCCCTCTATGAATTTTGTTCG
TAAGACTCTTCAGAAGTTTGGGGAGCTTTCGGGTTTGTTTACAAATTTTGGGAAAAGCTCTATTTTTGTTGCGGGGGTTAGTAATGAGGATACTTCTCATATAGCTACTA
GTTTGGGTTTTTTCCTTGGGAACCTCCCTCTTTGCTATCTTGGACTTCCTTTACTTTCTGGTAGGTTACATCCTAATGATTGTGGTCCTTTTATTCAACGTATTACTAAT
CGGATTCATTCTTGGACTGTTAGAGTTTACTGGGGTAGTGTGTTTGTTCTGACTACAAGTGTGCATCATGAAGTGGATAAGATACTGAGGTTTTATCTTTGGAGGGGTAA
GAAGGAAGGTAGAGGGGGTGTTAAGGTCGCGTGGGTGGAAGTGTATCTTCCTTTTGAGGAGGGTCGACTTGATATCCGTGATGGGCCTTCTTGGAACATTGTGAGTACTT
TAAAGATTCTTGGGGTAATGTTGACGAGTTTGGGTTCTCTTTGGGTGGCTTAA

mRNA sequence

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Protein sequence

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MVIEVLSRMLNNLTHLTFADDLMIFCAADEPSMNFVRKTLQKFGELSGLFTNFGKSSIFVAGVSNEDTSHIATSLGFFLGNLPLCYLGLPLLSGRLHPNDCGPFIQRITN
RIHSWTVRVYWGSVFVLTTSVHHEVDKILRFYLWRGKKEGRGGVKVAWVEVYLPFEEGRLDIRDGPSWNIVSTLKILGVMLTSLGSLWVA

Pay0001005 (gene) of Melon (Payzawat) v1 genome