; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0001045 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0001045
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase
Genome locationchr04:21031618..21034616
RNA-Seq ExpressionPay0001045
SyntenyPay0001045
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0043565 - sequence-specific DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR005162 - Retrotransposon gag domain
IPR001878 - Zinc finger, CCHC-type
IPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031931.1 pol protein [Cucumis melo var. makuwa]0.0e+0078.96Show/hide
Query:  MEQRFRDLIMQMREQQQPAPPAPAPAPAP--------VPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQ
        MEQRFRDLIMQMREQQQP PPAPAPAPAP        VPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQ
Subjt:  MEQRFRDLIMQMREQQQPAPPAPAPAPAP--------VPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQ

Query:  CAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI
        CAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI
Subjt:  CAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI

Query:  QGLVEL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHH
        QGLV        +D L + +  + Q          RG T         +P+   Q   R G    R     F+         AGEAARGKPLCTTCGKHH
Subjt:  QGLVEL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHH

Query:  LGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV-----------------------------------------
        LGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV                                         
Subjt:  LGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV-----------------------------------------

Query:  ----------------------------------------------------------------------------------------VISAIRASKLLS
                                                                                                VISAIRASKLLS
Subjt:  ----------------------------------------------------------------------------------------VISAIRASKLLS

Query:  QGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF
        QGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLF
Subjt:  QGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF

Query:  VKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFR
        VKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFR
Subjt:  VKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFR

Query:  EFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRR
        EFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRR
Subjt:  EFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRR

Query:  FVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV
        FVENFSRIA PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV
Subjt:  FVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV

Query:  VFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS
        VFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS G+
Subjt:  VFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS

KAA0040689.1 pol protein [Cucumis melo var. makuwa]0.0e+0080.64Show/hide
Query:  MEQRFRDLIMQMREQQQPAPPAPAPAP--------APVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQ
        MEQRFRDLIMQMREQQ+PA P PAPAP        APVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQ+WLSSLETIFRYMKCPEDQKVQ
Subjt:  MEQRFRDLIMQMREQQQPAPPAPAPAP--------APVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQ

Query:  CAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI
        CAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNL+QGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI
Subjt:  CAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI

Query:  QGLVEL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHH
        QGLV        +D L + +  + Q          RG T         +P+   Q   R G    R     F+         AGEAARGKPLCTTCGKHH
Subjt:  QGLVEL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHH

Query:  LGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV-----------------------------------------
        LGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQ AGAPHQGRVFATNKTEAE+AGTV                                         
Subjt:  LGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV-----------------------------------------

Query:  --------------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDV
                                                                VISAIRASKLLSQGT GILASVVDTREVDVSLSSEPVVRDYPDV
Subjt:  --------------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDV

Query:  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID
        FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID
Subjt:  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID

Query:  DLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVL
        DLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VL
Subjt:  DLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVL

Query:  QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF
        QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDP KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF
Subjt:  QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF

Query:  QNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK
        QNLKQKLVTAPVL VPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK
Subjt:  QNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK

Query:  ELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS
        ELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS G+
Subjt:  ELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS

KAA0048687.1 pol protein [Cucumis melo var. makuwa]0.0e+0080.31Show/hide
Query:  MEQRFRDLIMQMREQQQPAPPAPAPAP------------APVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPED
        MEQRFRDLIMQMREQQ+PA P PAPAP            APVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQ+WLSSLETIFRYMKCPED
Subjt:  MEQRFRDLIMQMREQQQPAPPAPAPAP------------APVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPED

Query:  QKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGL
        QKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGL
Subjt:  QKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGL

Query:  RLDIQGLVEL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTC
        RLDIQGLV        +D L + +  + Q          RGLT         +P+   Q   R G    R     F+         AGEAAR KPLCT C
Subjt:  RLDIQGLVEL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTC

Query:  GKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV-------------------------------------
        GKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAE+AGTV                                     
Subjt:  GKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV-------------------------------------

Query:  -----------------------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSE
                                                                         VISAIRASKLLSQGTWGILASVVDTRE DVSLSSE
Subjt:  -----------------------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSE

Query:  PVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVK
        PVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVK
Subjt:  PVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVK

Query:  NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAE
        NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAE
Subjt:  NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAE

Query:  HEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFV
        HEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFV
Subjt:  HEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFV

Query:  WSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHK
        WSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHK
Subjt:  WSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHK

Query:  SLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS
        SLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS G+
Subjt:  SLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS

KAA0053357.1 gag protease polyprotein [Cucumis melo var. makuwa]0.0e+0080.21Show/hide
Query:  MEQRFRDLIMQMREQQQPAP--------PAPAPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQ
        MEQRFRDLIMQMREQQQPAP        PAPAPAPAPVPV P+VVPDQLSAEAKHLRDFRKYNPTT+DGSLEDPTRAQLWLSSLETIFRY+KCPEDQKVQ
Subjt:  MEQRFRDLIMQMREQQQPAP--------PAPAPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQ

Query:  CAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI
        C VFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI
Subjt:  CAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI

Query:  QGLVEL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHH
        QGLV        +D L + +  + Q          RG T         +P+   Q   R G    R     F+         AGEAARGKPLCTTCGKHH
Subjt:  QGLVEL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHH

Query:  LGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV-----------------------------------------
        LGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNK EAERAGTV                                         
Subjt:  LGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV-----------------------------------------

Query:  ------------------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRD
                                                                    VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRD
Subjt:  ------------------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRD

Query:  YPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPL
        YPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPS+SPWGAP+LFVKKKDGSMRLCIDYRELNKVTVKNRYPL
Subjt:  YPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPL

Query:  PRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHL
        PRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHL
Subjt:  PRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHL

Query:  RIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKAC
        RIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK EAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKAC
Subjt:  RIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKAC

Query:  EDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYF
        EDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGC LMQQGKVVAY SRQLKSHEQNYPTHDLELA VVFALKIWRHYLYGEKIQIFTDHKSLKYF
Subjt:  EDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYF

Query:  FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS
        FTQKELNMRQRRWL+LVKDYDCEILYHPGKANVVAD LSRKVSHSAALITRQAPLHRDLERAEIAVS G+
Subjt:  FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS

KAA0053368.1 pol protein [Cucumis melo var. makuwa]0.0e+0078.67Show/hide
Query:  MEQRFRDLIMQMREQQQPAPPAPAPAPAPVP----VAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVF
        MEQRFRDLIMQMREQQQPAPPAPAPAPAP P    V PQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVF
Subjt:  MEQRFRDLIMQMREQQQPAPPAPAPAPAPVP----VAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVF

Query:  MLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLV
        MLTDRGTAWWETTERMLG DVSQITWQQFKE+FYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLV
Subjt:  MLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLV

Query:  EL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRC
                +D L + +  + Q          RG T         +P+   Q   R G    R     F+          GEAARGKPLCTTCGKHHLGRC
Subjt:  EL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRC

Query:  LFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV---------------------------------------------
        LFGTRTCFKCRQEGH ADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV                                             
Subjt:  LFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV---------------------------------------------

Query:  ------------------------------------------------------------------------------------VISAIRASKLLSQGTW
                                                                                            VISAIRASKL SQGTW
Subjt:  ------------------------------------------------------------------------------------VISAIRASKLLSQGTW

Query:  GILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK
        GILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK
Subjt:  GILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK

Query:  DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLD
        DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM+LMNRVFREFLD
Subjt:  DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLD

Query:  TFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVEN
        TFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVEN
Subjt:  TFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVEN

Query:  FSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFAL
        FSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP+LTVPDGSGSFVIYSDASKKGLGCVLMQQ KVVAYASRQLKSHEQNYPTHDLELAAVVFAL
Subjt:  FSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFAL

Query:  KIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS
        KIWRHYLYGEKIQI TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS G+
Subjt:  KIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS

TrEMBL top hitse value%identityAlignment
A0A5A7SQU8 Reverse transcriptase0.0e+0078.96Show/hide
Query:  MEQRFRDLIMQMREQQQPAPPAPAPAPAP--------VPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQ
        MEQRFRDLIMQMREQQQP PPAPAPAPAP        VPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQ
Subjt:  MEQRFRDLIMQMREQQQPAPPAPAPAPAP--------VPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQ

Query:  CAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI
        CAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI
Subjt:  CAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI

Query:  QGLVEL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHH
        QGLV        +D L + +  + Q          RG T         +P+   Q   R G    R     F+         AGEAARGKPLCTTCGKHH
Subjt:  QGLVEL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHH

Query:  LGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV-----------------------------------------
        LGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV                                         
Subjt:  LGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV-----------------------------------------

Query:  ----------------------------------------------------------------------------------------VISAIRASKLLS
                                                                                                VISAIRASKLLS
Subjt:  ----------------------------------------------------------------------------------------VISAIRASKLLS

Query:  QGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF
        QGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLF
Subjt:  QGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF

Query:  VKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFR
        VKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFR
Subjt:  VKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFR

Query:  EFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRR
        EFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRR
Subjt:  EFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRR

Query:  FVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV
        FVENFSRIA PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV
Subjt:  FVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV

Query:  VFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS
        VFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS G+
Subjt:  VFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS

A0A5A7THE6 Reverse transcriptase0.0e+0080.64Show/hide
Query:  MEQRFRDLIMQMREQQQPAPPAPAPAP--------APVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQ
        MEQRFRDLIMQMREQQ+PA P PAPAP        APVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQ+WLSSLETIFRYMKCPEDQKVQ
Subjt:  MEQRFRDLIMQMREQQQPAPPAPAPAP--------APVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQ

Query:  CAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI
        CAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNL+QGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI
Subjt:  CAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI

Query:  QGLVEL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHH
        QGLV        +D L + +  + Q          RG T         +P+   Q   R G    R     F+         AGEAARGKPLCTTCGKHH
Subjt:  QGLVEL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHH

Query:  LGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV-----------------------------------------
        LGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQ AGAPHQGRVFATNKTEAE+AGTV                                         
Subjt:  LGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV-----------------------------------------

Query:  --------------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDV
                                                                VISAIRASKLLSQGT GILASVVDTREVDVSLSSEPVVRDYPDV
Subjt:  --------------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDV

Query:  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID
        FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID
Subjt:  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID

Query:  DLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVL
        DLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VL
Subjt:  DLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVL

Query:  QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF
        QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDP KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF
Subjt:  QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF

Query:  QNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK
        QNLKQKLVTAPVL VPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK
Subjt:  QNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK

Query:  ELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS
        ELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS G+
Subjt:  ELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS

A0A5A7U330 Reverse transcriptase0.0e+0080.31Show/hide
Query:  MEQRFRDLIMQMREQQQPAPPAPAPAP------------APVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPED
        MEQRFRDLIMQMREQQ+PA P PAPAP            APVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQ+WLSSLETIFRYMKCPED
Subjt:  MEQRFRDLIMQMREQQQPAPPAPAPAP------------APVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPED

Query:  QKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGL
        QKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGL
Subjt:  QKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGL

Query:  RLDIQGLVEL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTC
        RLDIQGLV        +D L + +  + Q          RGLT         +P+   Q   R G    R     F+         AGEAAR KPLCT C
Subjt:  RLDIQGLVEL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTC

Query:  GKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV-------------------------------------
        GKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAE+AGTV                                     
Subjt:  GKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV-------------------------------------

Query:  -----------------------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSE
                                                                         VISAIRASKLLSQGTWGILASVVDTRE DVSLSSE
Subjt:  -----------------------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSE

Query:  PVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVK
        PVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVK
Subjt:  PVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVK

Query:  NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAE
        NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAE
Subjt:  NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAE

Query:  HEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFV
        HEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFV
Subjt:  HEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFV

Query:  WSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHK
        WSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHK
Subjt:  WSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHK

Query:  SLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS
        SLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS G+
Subjt:  SLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS

A0A5A7UE75 Reverse transcriptase0.0e+0078.67Show/hide
Query:  MEQRFRDLIMQMREQQQPAPPAPAPAPAPVP----VAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVF
        MEQRFRDLIMQMREQQQPAPPAPAPAPAP P    V PQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVF
Subjt:  MEQRFRDLIMQMREQQQPAPPAPAPAPAPVP----VAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVF

Query:  MLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLV
        MLTDRGTAWWETTERMLG DVSQITWQQFKE+FYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLV
Subjt:  MLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLV

Query:  EL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRC
                +D L + +  + Q          RG T         +P+   Q   R G    R     F+          GEAARGKPLCTTCGKHHLGRC
Subjt:  EL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRC

Query:  LFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV---------------------------------------------
        LFGTRTCFKCRQEGH ADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV                                             
Subjt:  LFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV---------------------------------------------

Query:  ------------------------------------------------------------------------------------VISAIRASKLLSQGTW
                                                                                            VISAIRASKL SQGTW
Subjt:  ------------------------------------------------------------------------------------VISAIRASKLLSQGTW

Query:  GILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK
        GILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK
Subjt:  GILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK

Query:  DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLD
        DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM+LMNRVFREFLD
Subjt:  DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLD

Query:  TFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVEN
        TFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVEN
Subjt:  TFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVEN

Query:  FSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFAL
        FSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP+LTVPDGSGSFVIYSDASKKGLGCVLMQQ KVVAYASRQLKSHEQNYPTHDLELAAVVFAL
Subjt:  FSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFAL

Query:  KIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS
        KIWRHYLYGEKIQI TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS G+
Subjt:  KIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS

A0A5A7UFS9 Reverse transcriptase0.0e+0080.21Show/hide
Query:  MEQRFRDLIMQMREQQQPAP--------PAPAPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQ
        MEQRFRDLIMQMREQQQPAP        PAPAPAPAPVPV P+VVPDQLSAEAKHLRDFRKYNPTT+DGSLEDPTRAQLWLSSLETIFRY+KCPEDQKVQ
Subjt:  MEQRFRDLIMQMREQQQPAP--------PAPAPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQ

Query:  CAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI
        C VFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI
Subjt:  CAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI

Query:  QGLVEL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHH
        QGLV        +D L + +  + Q          RG T         +P+   Q   R G    R     F+         AGEAARGKPLCTTCGKHH
Subjt:  QGLVEL------SDPLLMPMHCAWQ----WISVYRRGLT-------RLRPLVEVQHRDRRG----RLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHH

Query:  LGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV-----------------------------------------
        LGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNK EAERAGTV                                         
Subjt:  LGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV-----------------------------------------

Query:  ------------------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRD
                                                                    VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRD
Subjt:  ------------------------------------------------------------VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRD

Query:  YPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPL
        YPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPS+SPWGAP+LFVKKKDGSMRLCIDYRELNKVTVKNRYPL
Subjt:  YPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPL

Query:  PRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHL
        PRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHL
Subjt:  PRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHL

Query:  RIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKAC
        RIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK EAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKAC
Subjt:  RIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKAC

Query:  EDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYF
        EDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGC LMQQGKVVAY SRQLKSHEQNYPTHDLELA VVFALKIWRHYLYGEKIQIFTDHKSLKYF
Subjt:  EDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYF

Query:  FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS
        FTQKELNMRQRRWL+LVKDYDCEILYHPGKANVVAD LSRKVSHSAALITRQAPLHRDLERAEIAVS G+
Subjt:  FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGS

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.62.2e-8840.39Show/hide
Query:  YRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI
        Y    A  +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN++TV +R+P+P +D++  +L     F+ IDL  G+HQ+ +
Subjt:  YRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI

Query:  KDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG
            V KTAF +++GHYE++ M FGL NAPA F   MN + R  L+   +V++DDI+++S +  EH + L +V + L    L  +  KCEF  ++ +FLG
Subjt:  KDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG

Query:  HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDS-FQNLKQKLVTAPVLTVPDGSGSFVIY
        HV++  G+  +P KIEA+  +  P+   E+++FLGL GYYR+F+ NF+ IA P+T+  +K      +    DS F+ LK  +   P+L VPD +  F + 
Subjt:  HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDS-FQNLKQKLVTAPVLTVPDGSGSFVIY

Query:  SDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG
        +DAS   LG VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +I +DH+ L + +  K+ N +  RW   + ++D +I Y  G
Subjt:  SDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG

Query:  KANVVADALSR
        K N VADALSR
Subjt:  KANVVADALSR

P0CT34 Transposon Tf2-1 polyprotein1.0e-8237.05Show/hide
Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN
        L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY
        +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS
          T +    N R  RW   ++D++ EI Y PG AN +ADALSR V  +
Subjt:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS

P0CT41 Transposon Tf2-12 polyprotein1.0e-8237.05Show/hide
Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN
        L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY
        +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS
          T +    N R  RW   ++D++ EI Y PG AN +ADALSR V  +
Subjt:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS

P20825 Retrovirus-related Pol polyprotein from transposon 2974.8e-8839.09Show/hide
Query:  PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
        PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   V KK         R+ IDYR+LN++T+ +RYP+P +D++  +L     F+ IDL  G
Subjt:  PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG

Query:  YHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLK
        +HQ+ + +  + KTAF ++ GHYE++ M FGL NAPA F   MN + R  L+   +V++DDI+I+S +  EH   +++V   L D  L  +  KCEF  K
Subjt:  YHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLK

Query:  QVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGS
        + +FLGH+V+  G+  +P K++A+  +  P+   E+R+FLGL GYYR+F+ N++ IA P+T   +K       K    ++F+ LK  ++  P+L +PD  
Subjt:  QVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGS

Query:  GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE
          FV+ +DAS   LG VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHYL G +  I +DH+ L++    KE   +  RW   + +Y  +
Subjt:  GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE

Query:  ILYHPGKANVVADALSR
        I Y  GK N VADALSR
Subjt:  ILYHPGKANVVADALSR

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus8.5e-8536.13Show/hide
Query:  DYPDVFPEELPGLPPHREVEFAIELEPGT---VPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNK
        ++P +F   L G+     VE A++ E  T    PI    Y        E++ Q+ ELL  G IRPS SP+ +P+  V KK     +   R+ +D++ LN 
Subjt:  DYPDVFPEELPGLPPHREVEFAIELEPGT---VPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNK

Query:  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSK
        VT+ + YP+P I+     L  A  F+ +DL SG+HQ+ +K+ D+PKTAF +  G YEF+ + FGL NAPA+F  +++ + RE +     V+IDDI+++S+
Subjt:  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSK

Query:  TEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTR--
            H ++LR+VL +L    L     K  F   QV FLG++V+  G+  DP K+ A++    P++V E++ FLG+  YYR+F+++++++A PLT LTR  
Subjt:  TEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTR--

Query:  ---------KGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ----QGKVVAYASRQLKSHEQNYPTHDLELAAVVFAL
                    P    +    SF +LK  L ++ +L  P  +  F + +DAS   +G VL Q    + + +AY SR L   E+NY T + E+ A++++L
Subjt:  ---------KGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ----QGKVVAYASRQLKSHEQNYPTHDLELAAVVFAL

Query:  KIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
           R YLYG   I+++TDH+ L +    +  N + +RW   +++Y+CE++Y PGK+NVVADALSR
Subjt:  KIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein4.9e-2745.04Show/hide
Query:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAGAGGTTTAGAGATTTGATTATGCAGATGCGGGAGCAGCAGCAGCCTGCCCCGCCAGCTCCAGCACCAGCTCCGGCTCCAGTACCAGTTGCGCCCCAGGTTGT
GCCGGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACATTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGCTGTGGTTAT
CGTCTTTGGAGACCATATTCCGATACATGAAGTGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTCATGTTGACAGACAGAGGTACTGCATGGTGGGAGACTACAGAG
AGAATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAACAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTTTGAGAGATGCCAAGCGGCAGGAGTTCCT
GAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGT
TTGTTAGAGGCCTCCGACTGGACATTCAGGGTTTGGTCGAGCTTTCCGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTA
ACTCGTCTAAGACCGCTGGTAGAGGTTCAACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAACTTCAGATCAGGTGGCAGGGGAAGC
TGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGAAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACTTGCTTTAAGTGTAGGCAAGAGGGTCATACAGCTGATA
GATGCCCGTTGAGACTTACGGGGAACGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGGGTCTTTGCTACCAACAAGACTGAGGCTGAGAGGGCAGGCACGGTG
GTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCATCAGAACCGGT
GGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAG
CCCCTTACAGAATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTT
TTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATT
TGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGGT
ATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATC
GTGTTTATTGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTC
GAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGAC
CTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAG
GGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGT
GATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTA
CACATGATTTAGAGTTGGCAGCGGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTC
TTTACTCAGAAAGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGC
TCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGGGGGCAGTCACTATGCAG
TTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAGAGGTTTAGAGATTTGATTATGCAGATGCGGGAGCAGCAGCAGCCTGCCCCGCCAGCTCCAGCACCAGCTCCGGCTCCAGTACCAGTTGCGCCCCAGGTTGT
GCCGGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACATTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGCTGTGGTTAT
CGTCTTTGGAGACCATATTCCGATACATGAAGTGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTCATGTTGACAGACAGAGGTACTGCATGGTGGGAGACTACAGAG
AGAATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAACAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTTTGAGAGATGCCAAGCGGCAGGAGTTCCT
GAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGT
TTGTTAGAGGCCTCCGACTGGACATTCAGGGTTTGGTCGAGCTTTCCGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTA
ACTCGTCTAAGACCGCTGGTAGAGGTTCAACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAACTTCAGATCAGGTGGCAGGGGAAGC
TGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGAAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACTTGCTTTAAGTGTAGGCAAGAGGGTCATACAGCTGATA
GATGCCCGTTGAGACTTACGGGGAACGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGGGTCTTTGCTACCAACAAGACTGAGGCTGAGAGGGCAGGCACGGTG
GTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCATCAGAACCGGT
GGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAG
CCCCTTACAGAATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTT
TTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATT
TGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGGT
ATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATC
GTGTTTATTGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTC
GAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGAC
CTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAG
GGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGT
GATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTA
CACATGATTTAGAGTTGGCAGCGGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTC
TTTACTCAGAAAGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGC
TCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGGGGGCAGTCACTATGCAG
TTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGA
Protein sequenceShow/hide protein sequence
MEQRFRDLIMQMREQQQPAPPAPAPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTE
RMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVELSDPLLMPMHCAWQWISVYRRGL
TRLRPLVEVQHRDRRGRLSSSLFQCHSGTSDQVAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTV
VISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPV
LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVI
VFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRK
GAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYF
FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSGGSHYAVSPVDGTADFEAKDH