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Pay0001046 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0001046
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionEukaryotic translation initiation factor 3 subunit M
Genome locationchr01:19888425..19888990
RNA-Seq ExpressionPay0001046
SyntenyPay0001046
Gene Ontology termsGO:0001732 - formation of cytoplasmic translation initiation complex (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016282 - eukaryotic 43S preinitiation complex (cellular component)
GO:0033290 - eukaryotic 48S preinitiation complex (cellular component)
GO:0071541 - eukaryotic translation initiation factor 3 complex, eIF3m (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsIPR000717 - Proteasome component (PCI) domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039431.1 eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa]8.5e-5283.8Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGV---------TC---------
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIK           TC         
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGV---------TC---------

Query:  --VLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIVSR
          VLLVLQIND+EVELWVVKAITSKLIDCKMDQMNEVVIVSR
Subjt:  --VLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIVSR

KAA0053298.1 eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucumis melo var. makuwa]7.2e-5999.19Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQIND+EVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVSRY
        AITSKLIDCKMDQMNEVVIVSRY
Subjt:  AITSKLIDCKMDQMNEVVIVSRY

TYK00620.1 eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa]1.9e-5192.62Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIK        LQIND+EVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVSR
        AITSKLIDCKMDQMNEVVIVSR
Subjt:  AITSKLIDCKMDQMNEVVIVSR

XP_008467080.1 PREDICTED: eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucumis melo]7.2e-5999.19Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQIND+EVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVSRY
        AITSKLIDCKMDQMNEVVIVSRY
Subjt:  AITSKLIDCKMDQMNEVVIVSRY

XP_016903699.1 PREDICTED: eukaryotic translation initiation factor 3 subunit M-like isoform X1 [Cucumis melo]6.7e-5799.17Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQIND+EVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIV
        AITSKLIDCKMDQMNEVVIV
Subjt:  AITSKLIDCKMDQMNEVVIV

TrEMBL top hitse value%identityAlignment
A0A1S3CSW1 eukaryotic translation initiation factor 3 subunit M-like isoform X23.5e-5999.19Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQIND+EVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVSRY
        AITSKLIDCKMDQMNEVVIVSRY
Subjt:  AITSKLIDCKMDQMNEVVIVSRY

A0A1S4E653 eukaryotic translation initiation factor 3 subunit M-like isoform X13.3e-5799.17Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQIND+EVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIV
        AITSKLIDCKMDQMNEVVIV
Subjt:  AITSKLIDCKMDQMNEVVIV

A0A5A7TCS8 Eukaryotic translation initiation factor 3 subunit M4.1e-5283.8Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGV---------TC---------
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIK           TC         
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGV---------TC---------

Query:  --VLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIVSR
          VLLVLQIND+EVELWVVKAITSKLIDCKMDQMNEVVIVSR
Subjt:  --VLLVLQINDNEVELWVVKAITSKLIDCKMDQMNEVVIVSR

A0A5A7UE08 Eukaryotic translation initiation factor 3 subunit M-like isoform X23.5e-5999.19Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQIND+EVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVSRY
        AITSKLIDCKMDQMNEVVIVSRY
Subjt:  AITSKLIDCKMDQMNEVVIVSRY

A0A5D3BNN4 Eukaryotic translation initiation factor 3 subunit M9.2e-5292.62Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIK        LQIND+EVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVSR
        AITSKLIDCKMDQMNEVVIVSR
Subjt:  AITSKLIDCKMDQMNEVVIVSR

SwissProt top hitse value%identityAlignment
B4HR14 Eukaryotic translation initiation factor 3 subunit M4.9e-1034.58Show/hide
Query:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQM
        L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +        L K        LQIN++EVE +V++ + +KL+  ++DQ 
Subjt:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQM

Query:  NEVVIVS
        N+ V +S
Subjt:  NEVVIVS

B4MY75 Eukaryotic translation initiation factor 3 subunit M7.6e-1136.45Show/hide
Query:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQM
        L++ LL IF++++L AY+EF   +   + S GL HE  + KMRLL+ + L  + +     AL K        LQI +NEVE +V++ + +KL+  ++DQ 
Subjt:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQM

Query:  NEVVIVS
        N  V +S
Subjt:  NEVVIVS

B4QFD2 Eukaryotic translation initiation factor 3 subunit M4.9e-1034.58Show/hide
Query:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQM
        L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +        L K        LQIN++EVE +V++ + +KL+  ++DQ 
Subjt:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQM

Query:  NEVVIVS
        N+ V +S
Subjt:  NEVVIVS

Q54KZ8 Eukaryotic translation initiation factor 3 subunit M4.7e-2143.09Show/hide
Query:  MPAVGQLEKD--AKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWV
        +PAV  LE    +  SL Y+L+KIF T++LD++++FQ  N + L + GL ++DC+ K+RLLSL  L ++E +++PY+LI        +LQI++NEVE+WV
Subjt:  MPAVGQLEKD--AKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWV

Query:  VKAITSKLIDCKMDQMNEVVIVS
        + A+   L+D K+DQ+N +V V+
Subjt:  VKAITSKLIDCKMDQMNEVVIVS

Q7JVI3 Eukaryotic translation initiation factor 3 subunit M4.9e-1034.58Show/hide
Query:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQM
        L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +        L K        LQIN++EVE +V++ + +KL+  ++DQ 
Subjt:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCKMDQM

Query:  NEVVIVS
        N+ V +S
Subjt:  NEVVIVS

Arabidopsis top hitse value%identityAlignment
AT3G02200.1 Proteasome component (PCI) domain protein7.2e-4169.17Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK
        +PAV QLEKDAKY+ VYQLLKIFLTQRL+AY EFQ ANS  L+SYGL +EDC+ KMRLLSLVDL S+ES +IPY  IK        LQ+N+ +VELW+VK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIV
        AIT+KLI+CKMDQMN+V+IV
Subjt:  AITSKLIDCKMDQMNEVVIV

AT3G02200.2 Proteasome component (PCI) domain protein6.5e-4269.67Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK
        +PAV QLEKDAKY+ VYQLLKIFLTQRL+AY EFQ ANS  L+SYGL +EDC+ KMRLLSLVDL S+ES +IPY  IK        LQ+N+ +VELW+VK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVSR
        AIT+KLI+CKMDQMN+V+IVSR
Subjt:  AITSKLIDCKMDQMNEVVIVSR

AT5G15610.1 Proteasome component (PCI) domain protein2.5e-4172.27Show/hide
Query:  PAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKA
        PAV QLEKD   + VYQLLKIFLTQRLDAYMEFQ ANS  L++YGLV EDC+AKMRLLSLVDL S++S +IPYA IK        LQ+ND EVELWVVKA
Subjt:  PAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKA

Query:  ITSKLIDCKMDQMNEVVIV
        IT+KL+ CKMDQMN+VVIV
Subjt:  ITSKLIDCKMDQMNEVVIV

AT5G15610.2 Proteasome component (PCI) domain protein1.7e-4272.73Show/hide
Query:  PAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKA
        PAV QLEKD   + VYQLLKIFLTQRLDAYMEFQ ANS  L++YGLV EDC+AKMRLLSLVDL S++S +IPYA IK        LQ+ND EVELWVVKA
Subjt:  PAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKA

Query:  ITSKLIDCKMDQMNEVVIVSR
        IT+KL+ CKMDQMN+VVIVSR
Subjt:  ITSKLIDCKMDQMNEVVIVSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCTGTAGGGCAACTGGAGAAGGATGCCAAATATTCATTGGTTTATCAGCTTCTGAAGATTTTTTTGACCCAGAGATTGGATGCTTACATGGAATTTCAAGCTGC
AAATTCTTCTTTATTGAAAAGCTATGGTCTCGTCCATGAAGATTGCATTGCAAAGATGAGGTTATTATCATTGGTAGATCTTGGCTCAAATGAATCTGCCCGTATTCCAT
ATGCTCTCATCAAGGGTGTTACTTGTGTGTTACTTGTGCTTCAGATCAATGATAATGAGGTCGAACTGTGGGTCGTGAAGGCCATTACGTCCAAATTGATTGACTGCAAA
ATGGACCAGATGAACGAAGTTGTGATTGTGAGCCGGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGCTGTAGGGCAACTGGAGAAGGATGCCAAATATTCATTGGTTTATCAGCTTCTGAAGATTTTTTTGACCCAGAGATTGGATGCTTACATGGAATTTCAAGCTGC
AAATTCTTCTTTATTGAAAAGCTATGGTCTCGTCCATGAAGATTGCATTGCAAAGATGAGGTTATTATCATTGGTAGATCTTGGCTCAAATGAATCTGCCCGTATTCCAT
ATGCTCTCATCAAGGGTGTTACTTGTGTGTTACTTGTGCTTCAGATCAATGATAATGAGGTCGAACTGTGGGTCGTGAAGGCCATTACGTCCAAATTGATTGACTGCAAA
ATGGACCAGATGAACGAAGTTGTGATTGTGAGCCGGTACTGA
Protein sequenceShow/hide protein sequence
MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDNEVELWVVKAITSKLIDCK
MDQMNEVVIVSRY