; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0001107 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0001107
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase
Genome locationchr04:4124349..4126354
RNA-Seq ExpressionPay0001107
SyntenyPay0001107
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_027171988.1 uncharacterized protein LOC113771614 [Coffea eugenioides]3.0e-18354.52Show/hide
Query:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------
        +TV   + GE+VP+R   GWR CIDYR+LN VTKKDHF LPF+DQM+ERLA R+Y+CFLDGFS ++QI IA E Q+KTTFT                   
Subjt:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------

Query:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV
                             FMDD +VYGDSFD CL +++LIL RCIETNLVLN++KCHFMV HGI+LGH+VSSKGIEVDKAKIDVI  LPYP  +++V
Subjt:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV

Query:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN
        R FLG  GFYRRFIK FSKI  PL  LLQKDV F  DD C++AFD LK+ L S PI+Q P+W+LP EIMC+AS+ A+GA LGQR+ K  H IYYA R LN
Subjt:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN

Query:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD
         A  NY+TTEKE LA++FAL+KFRSY++G+ VIV++DHAA+RYL++KK++KPRL+RW+LLLQEF+L I+D++G+ N VADHLSRI   ++  P+R+ FP+
Subjt:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD

Query:  EHLFQTNHQAPWYADIVNYL-------------------------------------------VKEM---------------------------------
        EHLF  + Q PWYAD+VNYL                                           V EM                                 
Subjt:  EHLFQTNHQAPWYADIVNYL-------------------------------------------VKEM---------------------------------

Query:  -DFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIPRAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSN
         DFMGPFP+SF +LYILLAVDYVSKWVEA  TRTNDS VV+ F+ SNIF RFG+P+AI+ D+GTHFCN+T+    RKYGV HR+ T YHPQTN QA+ SN
Subjt:  -DFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIPRAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSN

Query:  REIKNILEK
        REIK+ILEK
Subjt:  REIKNILEK

XP_031392147.1 uncharacterized protein LOC116204210 [Punica granatum]2.3e-18350.99Show/hide
Query:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------
        +T+VK E+GE+VP R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLA +SYFCFLDG+S +YQI +A E Q+KTTFT                   
Subjt:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------

Query:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV
                             FMDD TV+GDSFD CL+++  +L+RCIE+NLVLNYEKCHFMV+HGI+LGH++SS+GIEVDK+K+D+I  LPYP+ ++ +
Subjt:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV

Query:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN
        R FLG  GFYRRFIK FSKIA PL +LLQKD  F+   NC++AFD LK+ L S PI+Q P+W LP EIM +AS+ A+GA LGQR+DK+ H IYYA +TL+
Subjt:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN

Query:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD
         A  NY+TTEKE LAIVFAL+KF+SY++GS ++V+TDHAA+++L++KKESKPRL+RW+LLLQEF+L IKDRKG+ N VADHLSR+V+ +E +PI + FPD
Subjt:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD

Query:  EHLFQTNHQAPWYADIVNYLVK------------------------------------------------------------------------------
        EHLF    + PWYAD+VN++V                                                                               
Subjt:  EHLFQTNHQAPWYADIVNYLVK------------------------------------------------------------------------------

Query:  --------------------------------------------EMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIP
                                                     MDFMGPFPSSF + YILLAVDYVSKWVEA  TRTND+ VV  FL SNIF RFGIP
Subjt:  --------------------------------------------EMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIP

Query:  RAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEKT
        RAII DQGTHFCNR+VE  M+KYGV HR+ T YHPQ+N QA+ SNRE+K+ILEKT
Subjt:  RAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEKT

XP_031393661.1 uncharacterized protein LOC116205261 [Punica granatum]3.9e-18350.99Show/hide
Query:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------
        +T+VK E+GE+VP R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLA +SYFCFLDG+S +YQI +A E Q+KTTFT                   
Subjt:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------

Query:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV
                             FMDD TV+GDSFD CL+++  +L+RCIE+NLVLNYEKCHFMV+HGI+LGH++SS+GIEVDK+K+D+I  LPYP+ ++ +
Subjt:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV

Query:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN
        R FLG  GFYRRFIK FSKIA PL +LLQKD  F+   NC++AFD LK+ L S PI+Q P+W LP EIM +AS+ A+GA LGQR+DK+ H IYYA +TL+
Subjt:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN

Query:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD
         A   Y+TTEKE LAIVFAL+KFRSY++GS ++V+TDHAA+++L++KKESKPRL+RW+LLLQEF+L IKDRKG+ N VADHLSR+V+ +E +PI + FPD
Subjt:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD

Query:  EHLFQTNHQAPWYADIVNYLVK------------------------------------------------------------------------------
        EHLF    + PWYAD+VN++V                                                                               
Subjt:  EHLFQTNHQAPWYADIVNYLVK------------------------------------------------------------------------------

Query:  --------------------------------------------EMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIP
                                                     MDFMGPFPSSF + YILLAVDYVSKWVEA  TRTND+ VV  FL SNIF RFGIP
Subjt:  --------------------------------------------EMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIP

Query:  RAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEKT
        RAII DQGTHFCNR+VE  M+KYGV HR+ T YHPQ+N QA+ SNRE+K+ILEKT
Subjt:  RAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEKT

XP_031400978.1 uncharacterized protein LOC116210952 [Punica granatum]2.7e-18451.3Show/hide
Query:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------
        +T+VK E+GE+VP R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLAS+SYFCFLDG+S +YQI +A E Q+KTTFT                   
Subjt:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------

Query:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV
                             FMDD TV+GDSFD CL+++  +L+RCIE+NLVLNYEKCHFMV+HGI+LGH++SS+GIEVDK+K+D+I  LPYP+ ++ +
Subjt:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV

Query:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN
        R FLG  GFYRRFIK FSKIA PL +LLQKD  F+   NC++AFD LK+ L S PI+Q P+W LP EIM +AS+ A+GA LGQR+DK+ H IYYA +TL+
Subjt:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN

Query:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD
         A  NY+TTEKE LAIVFAL+KFRSY++GS ++V+TDHAA+++L++KKESKPRL+RW+LLLQEF+L IKDRKG+ N VADHLSR+V+ +E +PI + FPD
Subjt:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD

Query:  EHLFQTNHQAPWYADIVNYLVK------------------------------------------------------------------------------
        EHLF    + PWYAD+VN++V                                                                               
Subjt:  EHLFQTNHQAPWYADIVNYLVK------------------------------------------------------------------------------

Query:  --------------------------------------------EMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIP
                                                     MDFMGPFPSSF + YILLAVDYVSKWVEA  TRTND+ VV  FL SNIF RFGIP
Subjt:  --------------------------------------------EMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIP

Query:  RAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEKT
        RAII DQGTHFCNR+VE  M+KYGV HR+ T YHPQ+N QA+ SNRE+K+ILEKT
Subjt:  RAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEKT

XP_031402684.1 uncharacterized protein LOC116212259 [Punica granatum]7.8e-18451.15Show/hide
Query:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------
        +T+VK E+GE+VP R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLA +SYFCFLDG+S +YQI +A E Q+KTTFT                   
Subjt:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------

Query:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV
                             FMDD TV+GDSFD CL+++  +L+RCIE+NLVLNYEKCHFMV+HGI+LGH++SS+GIEVDK+K+D+I  LPYP+ ++ +
Subjt:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV

Query:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN
        R FLG  GFYRRFIK FSKIA PL +LLQKD  F+   NC++AFD LK+ L S PI+Q P+W LP EIM +AS+ A+GA LGQR+DK+ H IYYA +TL+
Subjt:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN

Query:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD
         A  NY+TTEKE LAIVFAL+KFRSY++GS ++V+TDHAA+++L++KKESKPRL+RW+LLLQEF+L IKDRKG+ N VADHLSR+V+ +E +PI + FPD
Subjt:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD

Query:  EHLFQTNHQAPWYADIVNYLVK------------------------------------------------------------------------------
        EHLF    + PWYAD+VN++V                                                                               
Subjt:  EHLFQTNHQAPWYADIVNYLVK------------------------------------------------------------------------------

Query:  --------------------------------------------EMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIP
                                                     MDFMGPFPSSF + YILLAVDYVSKWVEA  TRTND+ VV  FL SNIF RFGIP
Subjt:  --------------------------------------------EMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIP

Query:  RAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEKT
        RAII DQGTHFCNR+VE  M+KYGV HR+ T YHPQ+N QA+ SNRE+K+ILEKT
Subjt:  RAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEKT

TrEMBL top hitse value%identityAlignment
A0A6P6V9E5 uncharacterized protein LOC1137185146.6e-18150.92Show/hide
Query:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------
        +TV   + GE+VP+R   GWR CIDYR+LN VTKKDHFPLPF+DQM+ERLA R+Y+CFLDGFS ++QI IA E Q+KTTFT                   
Subjt:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------

Query:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV
                             FMDD +VYGDSFD CL +++LIL RCIETNLVLN+EKCHFMV HGI+LGH+VSSKGIEVDKAKID+I  LPYP  +++V
Subjt:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV

Query:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN
        R FLG  GFYRRFIK FSKI  PL  LLQKDV F  +D C+KAF+ LK+ L S PI+Q P+WNLP EIMC+AS+ A+GA LGQR+ K  H IYYA R LN
Subjt:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN

Query:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD
         A  NY+TTEKE LA++FAL+KFRSY++G+ VIV++DHAA+RYL++KK++KPRL+RW+LLLQEF+L I+D+KG+ N VADHLSRI   ++  P+++ FP+
Subjt:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD

Query:  EHLFQTNHQAPWYADIVNYLVK------------------------------------------------------------------------------
        EHLF  N Q PWYAD+VNYLV                                                                               
Subjt:  EHLFQTNHQAPWYADIVNYLVK------------------------------------------------------------------------------

Query:  --------------------------------------------EMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIP
                                                    ++DFMGPFP+SF +LYILLAVDYVSKWVEA  TRTNDS VV+ F+ SNIF RFG+P
Subjt:  --------------------------------------------EMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIP

Query:  RAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEK
        RAI+ D+GTHFCNRT+    RKYGV HR+ T YHPQTN QA+ +NREIK+ILEK
Subjt:  RAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEK

A0A6P8D4X0 Reverse transcriptase1.1e-18350.99Show/hide
Query:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------
        +T+VK E+GE+VP R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLA +SYFCFLDG+S +YQI +A E Q+KTTFT                   
Subjt:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------

Query:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV
                             FMDD TV+GDSFD CL+++  +L+RCIE+NLVLNYEKCHFMV+HGI+LGH++SS+GIEVDK+K+D+I  LPYP+ ++ +
Subjt:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV

Query:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN
        R FLG  GFYRRFIK FSKIA PL +LLQKD  F+   NC++AFD LK+ L S PI+Q P+W LP EIM +AS+ A+GA LGQR+DK+ H IYYA +TL+
Subjt:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN

Query:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD
         A  NY+TTEKE LAIVFAL+KF+SY++GS ++V+TDHAA+++L++KKESKPRL+RW+LLLQEF+L IKDRKG+ N VADHLSR+V+ +E +PI + FPD
Subjt:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD

Query:  EHLFQTNHQAPWYADIVNYLVK------------------------------------------------------------------------------
        EHLF    + PWYAD+VN++V                                                                               
Subjt:  EHLFQTNHQAPWYADIVNYLVK------------------------------------------------------------------------------

Query:  --------------------------------------------EMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIP
                                                     MDFMGPFPSSF + YILLAVDYVSKWVEA  TRTND+ VV  FL SNIF RFGIP
Subjt:  --------------------------------------------EMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIP

Query:  RAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEKT
        RAII DQGTHFCNR+VE  M+KYGV HR+ T YHPQ+N QA+ SNRE+K+ILEKT
Subjt:  RAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEKT

A0A6P8DJV3 Reverse transcriptase1.9e-18350.99Show/hide
Query:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------
        +T+VK E+GE+VP R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLA +SYFCFLDG+S +YQI +A E Q+KTTFT                   
Subjt:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------

Query:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV
                             FMDD TV+GDSFD CL+++  +L+RCIE+NLVLNYEKCHFMV+HGI+LGH++SS+GIEVDK+K+D+I  LPYP+ ++ +
Subjt:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV

Query:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN
        R FLG  GFYRRFIK FSKIA PL +LLQKD  F+   NC++AFD LK+ L S PI+Q P+W LP EIM +AS+ A+GA LGQR+DK+ H IYYA +TL+
Subjt:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN

Query:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD
         A   Y+TTEKE LAIVFAL+KFRSY++GS ++V+TDHAA+++L++KKESKPRL+RW+LLLQEF+L IKDRKG+ N VADHLSR+V+ +E +PI + FPD
Subjt:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD

Query:  EHLFQTNHQAPWYADIVNYLVK------------------------------------------------------------------------------
        EHLF    + PWYAD+VN++V                                                                               
Subjt:  EHLFQTNHQAPWYADIVNYLVK------------------------------------------------------------------------------

Query:  --------------------------------------------EMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIP
                                                     MDFMGPFPSSF + YILLAVDYVSKWVEA  TRTND+ VV  FL SNIF RFGIP
Subjt:  --------------------------------------------EMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIP

Query:  RAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEKT
        RAII DQGTHFCNR+VE  M+KYGV HR+ T YHPQ+N QA+ SNRE+K+ILEKT
Subjt:  RAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEKT

A0A6P8E7C5 Reverse transcriptase1.3e-18451.3Show/hide
Query:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------
        +T+VK E+GE+VP R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLAS+SYFCFLDG+S +YQI +A E Q+KTTFT                   
Subjt:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------

Query:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV
                             FMDD TV+GDSFD CL+++  +L+RCIE+NLVLNYEKCHFMV+HGI+LGH++SS+GIEVDK+K+D+I  LPYP+ ++ +
Subjt:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV

Query:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN
        R FLG  GFYRRFIK FSKIA PL +LLQKD  F+   NC++AFD LK+ L S PI+Q P+W LP EIM +AS+ A+GA LGQR+DK+ H IYYA +TL+
Subjt:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN

Query:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD
         A  NY+TTEKE LAIVFAL+KFRSY++GS ++V+TDHAA+++L++KKESKPRL+RW+LLLQEF+L IKDRKG+ N VADHLSR+V+ +E +PI + FPD
Subjt:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD

Query:  EHLFQTNHQAPWYADIVNYLVK------------------------------------------------------------------------------
        EHLF    + PWYAD+VN++V                                                                               
Subjt:  EHLFQTNHQAPWYADIVNYLVK------------------------------------------------------------------------------

Query:  --------------------------------------------EMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIP
                                                     MDFMGPFPSSF + YILLAVDYVSKWVEA  TRTND+ VV  FL SNIF RFGIP
Subjt:  --------------------------------------------EMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIP

Query:  RAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEKT
        RAII DQGTHFCNR+VE  M+KYGV HR+ T YHPQ+N QA+ SNRE+K+ILEKT
Subjt:  RAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEKT

A0A6P8E830 Reverse transcriptase3.8e-18451.15Show/hide
Query:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------
        +T+VK E+GE+VP R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLA +SYFCFLDG+S +YQI +A E Q+KTTFT                   
Subjt:  MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT-------------------

Query:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV
                             FMDD TV+GDSFD CL+++  +L+RCIE+NLVLNYEKCHFMV+HGI+LGH++SS+GIEVDK+K+D+I  LPYP+ ++ +
Subjt:  --------------------FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDV

Query:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN
        R FLG  GFYRRFIK FSKIA PL +LLQKD  F+   NC++AFD LK+ L S PI+Q P+W LP EIM +AS+ A+GA LGQR+DK+ H IYYA +TL+
Subjt:  RFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLN

Query:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD
         A  NY+TTEKE LAIVFAL+KFRSY++GS ++V+TDHAA+++L++KKESKPRL+RW+LLLQEF+L IKDRKG+ N VADHLSR+V+ +E +PI + FPD
Subjt:  QALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPD

Query:  EHLFQTNHQAPWYADIVNYLVK------------------------------------------------------------------------------
        EHLF    + PWYAD+VN++V                                                                               
Subjt:  EHLFQTNHQAPWYADIVNYLVK------------------------------------------------------------------------------

Query:  --------------------------------------------EMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIP
                                                     MDFMGPFPSSF + YILLAVDYVSKWVEA  TRTND+ VV  FL SNIF RFGIP
Subjt:  --------------------------------------------EMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIP

Query:  RAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEKT
        RAII DQGTHFCNR+VE  M+KYGV HR+ T YHPQ+N QA+ SNRE+K+ILEKT
Subjt:  RAIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEKT

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.66.0e-5434.6Show/hide
Query:  WRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT--------------------------------------
        +R+ IDYRKLNE+T  D  P+P +D+++ +L   +YF  +D    F+QI +  E   KT F+                                      
Subjt:  WRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT--------------------------------------

Query:  -FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSK
          ++DD+ V+  S D  L S+ L+  +  + NL L  +KC F+      LGH+++  GI+ +  KI+ IQK P PT  K+++ FLG  G+YR+FI  F+ 
Subjt:  -FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSK

Query:  IALPLTNLLQKDVPF-LIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLNQALFNYTTTEKEFLAIVF
        IA P+T  L+K++     +     AF  LK  +   PIL+ P++     +  +AS++ALGA L Q      H + Y  RTLN+   NY+T EKE LAIV+
Subjt:  IALPLTNLLQKDVPF-LIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLNQALFNYTTTEKEFLAIVF

Query:  ALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRI
        A   FR Y++G    + +DH  + +L   K+   +L RW + L EF+  IK  KG  N VAD LSRI
Subjt:  ALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRI

P0CT41 Transposon Tf2-12 polyprotein3.7e-4330.9Show/hide
Query:  RMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPI--ACEHQ-------------------------------------KKTTFT
        RM +DY+ LN+  K + +PLP ++Q++ ++   + F  LD  S ++ I +    EH+                                     K++   
Subjt:  RMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPI--ACEHQ-------------------------------------KKTTFT

Query:  FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSKI
         +MDD+ ++  S    +  ++ +L +    NL++N  KC F  S    +G+ +S KG    +  ID + +   P   K++R FLGSV + R+FI   S++
Subjt:  FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSKI

Query:  ALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQR-IDKKLHAIYYAFRTLNQALFNYTTTEKEFLAIVFA
          PL NLL+KDV +       +A +++KQ LVS P+L+  +++    +  +AS++A+GA L Q+  D K + + Y    +++A  NY+ ++KE LAI+ +
Subjt:  ALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQR-IDKKLHAIYYAFRTLNQALFNYTTTEKEFLAIVFA

Query:  LDKFRSYIIGS--PVIVYTDHAAVRYLISK--KESKP---RLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPDEHLFQTNHQAPW
        L  +R Y+  +  P  + TDH   R LI +   ES+P   RL RW L LQ+FN  I  R G+ N +AD LSRIV + E  PI +D  D  +   N Q   
Subjt:  LDKFRSYIIGS--PVIVYTDHAAVRYLISK--KESKP---RLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQESMPIREDFPDEHLFQTNHQAPW

Query:  YADIVNYLVKE
          D  N +V E
Subjt:  YADIVNYLVKE

P10394 Retrovirus-related Pol polyprotein from transposon 4127.3e-5235.14Show/hide
Query:  WRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT--------------------------------------
        WR+ IDYR++N+    D FPLP +D ++++L    YF  LD  S F+QI +    +  T+F+                                      
Subjt:  WRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT--------------------------------------

Query:  -FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSK
          +MDDL V G S    L ++  +  +C E NL L+ EKC F +     LGH  + KGI  D  K DVIQ  P P      R F+    +YRRFIK F+ 
Subjt:  -FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSK

Query:  IALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLNQALFNYTTTEKEFLAIVFA
         +  +T L +K+VPF   D C+KAF  LK +L++  +LQ P+++    I  +AS  A GA L Q  +     + YA R   +   N +TTE+E  AI +A
Subjt:  IALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLNQALFNYTTTEKEFLAIVFA

Query:  LDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQ
        +  FR YI G    V TDH  + YL S      +L R  L L+E+N T++  KG +N VAD LSRI  K+
Subjt:  LDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRIVQKQ

P20825 Retrovirus-related Pol polyprotein from transposon 2977.8e-5434.68Show/hide
Query:  NGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT------------------------------------
        N +R+ IDYRKLNE+T  D +P+P +D+++ +L    YF  +D    F+QI +  E   KT F+                                    
Subjt:  NGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT------------------------------------

Query:  ---FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYF
            ++DD+ ++  S    L+SI+L+  +  + NL L  +KC F+      LGH+V+  GI+ +  K+  I   P PT  K++R FLG  G+YR+FI  +
Subjt:  ---FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYF

Query:  SKIALPLTNLLQKDVPFLIDDNCK----KAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLNQALFNYTTTEKEF
        + IA P+T+ L+K       D  K    +AF+ LK  ++  PILQ P++     +  +ASNLALGA L Q      H I +  RTLN    NY+  EKE 
Subjt:  SKIALPLTNLLQKDVPFLIDDNCK----KAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLNQALFNYTTTEKEF

Query:  LAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRI
        LAIV+A   FR Y++G   ++ +DH  +R+L + KE   +L RW + L E+   I   KG  N VAD LSRI
Subjt:  LAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRI

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus6.6e-5332.01Show/hide
Query:  WRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT--------------------------------------
        +RM +D+++LN VT  D +P+P ++  +  L +  YF  LD  S F+QI +      KT F+                                      
Subjt:  WRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFT--------------------------------------

Query:  -FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSK
          ++DD+ V+ + +D    ++ L+L    + NL +N EK HF+ +    LG++V++ GI+ D  K+  I ++P PT +K+++ FLG   +YR+FI+ ++K
Subjt:  -FFMDDLTVYGDSFDACLSSIELILNRCIETNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSK

Query:  IALPLTNLLQ-----------KDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLNQALFNYTT
        +A PLTNL +             VP  +D+   ++F+DLK  L S+ IL  P +  P  +  +ASN A+GA L Q    +   I Y  R+LN+   NY T
Subjt:  IALPLTNLLQ-----------KDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLNQALFNYTT

Query:  TEKEFLAIVFALDKFRSYIIGSPVI-VYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRI
         EKE LAI+++LD  R+Y+ G+  I VYTDH  + + +  +    +L RW   ++E+N  +  + G +N VAD LSRI
Subjt:  TEKEFLAIVFALDKFRSYIIGSPVI-VYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIKDRKGANNFVADHLSRI

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein1.2e-1232.06Show/hide
Query:  LSSIELILNRCIETNLVLNYEKCHFMVSHGIILG--HLVSSKGIEVDKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPF
        ++ + ++L    +     N +KC F       LG  H++S +G+  D AK++ +   P P    ++R FLG  G+YRRF+K + KI  PLT LL+K+   
Subjt:  LSSIELILNRCIETNLVLNYEKCHFMVSHGIILG--HLVSSKGIEVDKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPF

Query:  LIDDNCKKAFDDLKQRLVSTPILQSPNWNLP
           +    AF  LK  + + P+L  P+  LP
Subjt:  LIDDNCKKAFDDLKQRLVSTPILQSPNWNLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGTTGTAAAGAAGGAAAAAGGTGAGATGGTTCCAATGCGAATGCAAAATGGTTGGAGAATGTGCATAGATTACCGGAAACTCAATGAAGTAACAAAAAAGGATCA
TTTCCCCTTACCTTTTCTTGATCAAATGATAGAACGCTTAGCGAGTAGATCATATTTTTGTTTCTTAGATGGATTTTCCAATTTTTACCAAATTCCTATAGCATGTGAAC
ACCAAAAGAAAACAACTTTTACTTTTTTCATGGATGATCTCACAGTTTATGGTGATAGTTTCGATGCATGTTTATCCAGTATAGAATTAATTCTAAATAGATGCATAGAA
ACTAACCTTGTCTTGAATTATGAAAAGTGTCATTTCATGGTGTCTCATGGTATAATTTTAGGACACTTAGTGTCTTCAAAAGGAATAGAGGTAGATAAAGCAAAAATTGA
CGTTATACAAAAATTGCCATATCCAACATGTTTAAAAGATGTTAGATTCTTCCTTGGTAGTGTCGGCTTTTATAGACGGTTTATAAAATATTTTTCTAAAATTGCTTTGC
CTCTAACTAATCTCTTGCAAAAAGATGTACCATTTCTGATTGATGACAATTGTAAGAAGGCATTTGATGATCTCAAACAAAGGTTAGTCTCTACCCCTATCCTTCAATCT
CCTAATTGGAATTTACCTTCCGAAATAATGTGTAATGCAAGCAACTTAGCATTAGGAGCTGGTTTAGGACAAAGGATAGATAAAAAATTGCATGCTATATACTATGCATT
TAGGACCCTTAACCAAGCACTATTTAACTACACCACAACTGAAAAAGAATTTCTTGCTATCGTTTTTGCTTTAGATAAGTTTAGAAGCTACATTATTGGCTCCCCAGTAA
TTGTTTACACTGATCATGCAGCAGTTAGGTACCTTATATCAAAAAAAGAATCAAAACCAAGGCTTGTTCGATGGGTTTTACTTTTGCAAGAATTTAACCTAACCATCAAG
GATAGAAAAGGAGCCAACAATTTTGTAGCCGACCATCTTAGTCGAATTGTACAAAAGCAAGAAAGTATGCCAATTCGAGAAGACTTCCCTGATGAACATCTCTTTCAAAC
AAATCATCAAGCACCATGGTATGCCGATATTGTAAACTACTTAGTCAAGGAAATGGATTTTATGGGTCCCTTTCCTTCTTCTTTTGAATATCTTTACATTTTATTAGCCG
TTGATTATGTATCGAAGTGGGTTGAAGCAATCCCCACTAGGACTAATGATTCTTCTGTTGTCTCAAGATTTCTAGTTTCTAACATATTTTTTAGATTTGGCATCCCAAGG
GCAATCATTAGAGATCAAGGAACACACTTTTGCAATCGAACCGTTGAACCCTTCATGAGAAAATATGGTGTTCAACACCGTATTTTCACACCATACCATCCTCAAACGAA
CGAACAGGCCAAAACTTCTAATCGAGAGATAAAAAATATCCTAGAGAAAACCCGTCAACACAAAAAGGAAGGATTGGAGCCTCCGCATCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACCGTTGTAAAGAAGGAAAAAGGTGAGATGGTTCCAATGCGAATGCAAAATGGTTGGAGAATGTGCATAGATTACCGGAAACTCAATGAAGTAACAAAAAAGGATCA
TTTCCCCTTACCTTTTCTTGATCAAATGATAGAACGCTTAGCGAGTAGATCATATTTTTGTTTCTTAGATGGATTTTCCAATTTTTACCAAATTCCTATAGCATGTGAAC
ACCAAAAGAAAACAACTTTTACTTTTTTCATGGATGATCTCACAGTTTATGGTGATAGTTTCGATGCATGTTTATCCAGTATAGAATTAATTCTAAATAGATGCATAGAA
ACTAACCTTGTCTTGAATTATGAAAAGTGTCATTTCATGGTGTCTCATGGTATAATTTTAGGACACTTAGTGTCTTCAAAAGGAATAGAGGTAGATAAAGCAAAAATTGA
CGTTATACAAAAATTGCCATATCCAACATGTTTAAAAGATGTTAGATTCTTCCTTGGTAGTGTCGGCTTTTATAGACGGTTTATAAAATATTTTTCTAAAATTGCTTTGC
CTCTAACTAATCTCTTGCAAAAAGATGTACCATTTCTGATTGATGACAATTGTAAGAAGGCATTTGATGATCTCAAACAAAGGTTAGTCTCTACCCCTATCCTTCAATCT
CCTAATTGGAATTTACCTTCCGAAATAATGTGTAATGCAAGCAACTTAGCATTAGGAGCTGGTTTAGGACAAAGGATAGATAAAAAATTGCATGCTATATACTATGCATT
TAGGACCCTTAACCAAGCACTATTTAACTACACCACAACTGAAAAAGAATTTCTTGCTATCGTTTTTGCTTTAGATAAGTTTAGAAGCTACATTATTGGCTCCCCAGTAA
TTGTTTACACTGATCATGCAGCAGTTAGGTACCTTATATCAAAAAAAGAATCAAAACCAAGGCTTGTTCGATGGGTTTTACTTTTGCAAGAATTTAACCTAACCATCAAG
GATAGAAAAGGAGCCAACAATTTTGTAGCCGACCATCTTAGTCGAATTGTACAAAAGCAAGAAAGTATGCCAATTCGAGAAGACTTCCCTGATGAACATCTCTTTCAAAC
AAATCATCAAGCACCATGGTATGCCGATATTGTAAACTACTTAGTCAAGGAAATGGATTTTATGGGTCCCTTTCCTTCTTCTTTTGAATATCTTTACATTTTATTAGCCG
TTGATTATGTATCGAAGTGGGTTGAAGCAATCCCCACTAGGACTAATGATTCTTCTGTTGTCTCAAGATTTCTAGTTTCTAACATATTTTTTAGATTTGGCATCCCAAGG
GCAATCATTAGAGATCAAGGAACACACTTTTGCAATCGAACCGTTGAACCCTTCATGAGAAAATATGGTGTTCAACACCGTATTTTCACACCATACCATCCTCAAACGAA
CGAACAGGCCAAAACTTCTAATCGAGAGATAAAAAATATCCTAGAGAAAACCCGTCAACACAAAAAGGAAGGATTGGAGCCTCCGCATCAATGA
Protein sequenceShow/hide protein sequence
MTVVKKEKGEMVPMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLASRSYFCFLDGFSNFYQIPIACEHQKKTTFTFFMDDLTVYGDSFDACLSSIELILNRCIE
TNLVLNYEKCHFMVSHGIILGHLVSSKGIEVDKAKIDVIQKLPYPTCLKDVRFFLGSVGFYRRFIKYFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQS
PNWNLPSEIMCNASNLALGAGLGQRIDKKLHAIYYAFRTLNQALFNYTTTEKEFLAIVFALDKFRSYIIGSPVIVYTDHAAVRYLISKKESKPRLVRWVLLLQEFNLTIK
DRKGANNFVADHLSRIVQKQESMPIREDFPDEHLFQTNHQAPWYADIVNYLVKEMDFMGPFPSSFEYLYILLAVDYVSKWVEAIPTRTNDSSVVSRFLVSNIFFRFGIPR
AIIRDQGTHFCNRTVEPFMRKYGVQHRIFTPYHPQTNEQAKTSNREIKNILEKTRQHKKEGLEPPHQ