; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0001127 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0001127
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRNA polymerase II transcriptional coactivator KIWI-like
Genome locationchr08:19695334..19715165
RNA-Seq ExpressionPay0001127
SyntenyPay0001127
Gene Ontology termsGO:0060261 - positive regulation of transcription initiation from RNA polymerase II promoter (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005667 - transcription factor complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR003173 - Transcriptional coactivator p15 (PC4), C-terminal
IPR009044 - ssDNA-binding transcriptional regulator
IPR045125 - RNA polymerase II transcriptional coactivator Sub1/Tcp4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041354.1 RNA polymerase II transcriptional coactivator KIWI isoform X1 [Cucumis melo var. makuwa]7.2e-3490.48Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQVC
        MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKG    +  +C
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQVC

TYK26808.1 RNA polymerase II transcriptional coactivator KIWI isoform X1 [Cucumis melo var. makuwa]7.2e-3490.48Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQVC
        MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKG    +  +C
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQVC

XP_004146395.1 RNA polymerase II transcriptional coactivator KIWI isoform X1 [Cucumis sativus]2.1e-3392.68Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ
        MSASGKRK DED VSEGDAPPSKTF+KD DD DEIVVCELSKNRRVMVR WQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ

XP_008442140.1 PREDICTED: RNA polymerase II transcriptional coactivator KIWI isoform X1 [Cucumis melo]2.4e-37100Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ
        MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ

XP_008442141.1 PREDICTED: RNA polymerase II transcriptional coactivator KIWI isoform X2 [Cucumis melo]1.2e-33100Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKG
        MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKG
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKG

TrEMBL top hitse value%identityAlignment
A0A0A0L2F1 PC4 domain-containing protein1.0e-3392.68Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ
        MSASGKRK DED VSEGDAPPSKTF+KD DD DEIVVCELSKNRRVMVR WQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ

A0A1S3B4K6 RNA polymerase II transcriptional coactivator KIWI isoform X11.2e-37100Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ
        MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ

A0A1S3B509 RNA polymerase II transcriptional coactivator KIWI isoform X25.9e-34100Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKG
        MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKG
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKG

A0A5A7TD38 RNA polymerase II transcriptional coactivator KIWI isoform X13.5e-3490.48Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQVC
        MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKG    +  +C
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQVC

A0A5D3DTF5 RNA polymerase II transcriptional coactivator KIWI isoform X13.5e-3490.48Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQVC
        MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKG    +  +C
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQVC

SwissProt top hitse value%identityAlignment
O65154 RNA polymerase II transcriptional coactivator KIWI5.5e-2160.23Show/hide
Query:  MSASGKRKDDEDRVSEGDA---PPSKTFRK---DPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ
        MS+ GKRKD++ R S+ ++    P+K   K   D D +D+IVVC +SKNRRV VR W GKI +DIREFYVKDGK +PGKKGISLS+DQ
Subjt:  MSASGKRKDDEDRVSEGDA---PPSKTFRK---DPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ

O65155 RNA polymerase II transcriptional coactivator KELP1.7e-0943.04Show/hide
Query:  KDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQVCTY
        K++ED    GD    K   K+ DD  ++++C LS  RRV +++++GK +V IRE+Y KDGK++P  KGISL+ +Q  T+
Subjt:  KDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQVCTY

P11031 Activated RNA polymerase II transcriptional coactivator p153.3e-0546.67Show/hide
Query:  ELSKNRRVMVRKWQGKIVVDIREFYV-KDGKQMPGKKGISLSLDQ
        ++ K R V VR ++GKI++DIRE+++  +G+  PG+KGISL+++Q
Subjt:  ELSKNRRVMVRKWQGKIVVDIREFYV-KDGKQMPGKKGISLSLDQ

Q872F4 Putative RNA polymerase II transcriptional coactivator1.1e-0550Show/hide
Query:  DADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ
        D D     EL  NRR+    ++   +V+IRE+Y   GK MPGKKGISLSL Q
Subjt:  DADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ

Q9VLR5 RNA polymerase II transcriptional coactivator6.6e-0644.16Show/hide
Query:  KDDEDRVSEGDAPPSKTFRKDPDDADE--IVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ
        K    +  E DAP S     DP D+ E       L   R+V + +++G+  VDIREFY K G+ +PGKKGISLSL Q
Subjt:  KDDEDRVSEGDAPPSKTFRKDPDDADE--IVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ

Arabidopsis top hitse value%identityAlignment
AT5G09240.1 ssDNA-binding transcriptional regulator8.8e-1448.89Show/hide
Query:  MSASGKRKDDEDRV------SEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMP--GKKGISLSLDQ
        MS +GKRKD++ R       SE  APP K   K  D+ ++I +C L KNRRV VR   G+I + IR+F+VKDG  +P   K+GISLSL+Q
Subjt:  MSASGKRKDDEDRV------SEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMP--GKKGISLSLDQ

AT5G09240.2 ssDNA-binding transcriptional regulator1.0e-1449.46Show/hide
Query:  MSASGKRKDDEDRV------SEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMP--GKKGISLSLDQVCT
        MS +GKRKD++ R       SE  APP K   K  D+ ++I +C L KNRRV VR   G+I + IR+F+VKDG  +P   K+GISLSL+QV T
Subjt:  MSASGKRKDDEDRV------SEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMP--GKKGISLSLDQVCT

AT5G09240.3 ssDNA-binding transcriptional regulator9.1e-1139.25Show/hide
Query:  MSASGKRKDDEDRV------SEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMP--GKKGISLSLDQVCTYIILIFF
        MS +GKRKD++ R       SE  APP K   K  D+ ++I +C L KNRRV VR   G+I + IR+F+VKDG  +P   K+G ++ +  +C  ++  F 
Subjt:  MSASGKRKDDEDRV------SEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMP--GKKGISLSLDQVCTYIILIFF

Query:  LFLFCFR
        +   C R
Subjt:  LFLFCFR

AT5G09250.1 ssDNA-binding transcriptional regulator3.9e-2260.23Show/hide
Query:  MSASGKRKDDEDRVSEGDA---PPSKTFRK---DPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ
        MS+ GKRKD++ R S+ ++    P+K   K   D D +D+IVVC +SKNRRV VR W GKI +DIREFYVKDGK +PGKKGISLS+DQ
Subjt:  MSASGKRKDDEDRVSEGDA---PPSKTFRK---DPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ

AT5G09250.2 ssDNA-binding transcriptional regulator9.1e-1958.02Show/hide
Query:  MSASGKRKDDEDRVSEGDA---PPSKTFRK---DPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKG
        MS+ GKRKD++ R S+ ++    P+K   K   D D +D+IVVC +SKNRRV VR W GKI +DIREFYVKDGK +PGKKG
Subjt:  MSASGKRKDDEDRVSEGDA---PPSKTFRK---DPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCAAGCGGAAAGCGAAAGGACGACGAAGATCGCGTATCCGAAGGAGATGCTCCTCCTTCTAAAACATTCAGGAAAGATCCTGACGATGCCGATGAAATCGTCGT
CTGCGAGCTTTCAAAGAACCGTAGGGTTATGGTCAGGAAATGGCAAGGAAAGATTGTCGTCGATATTCGCGAGTTTTATGTCAAAGATGGCAAGCAGATGCCTGGAAAGA
AAGGTATCTCGCTATCCTTGGATCAGGTTTGCACCTATATTATTTTAATTTTTTTCCTTTTCCTTTTTTGTTTTAGGAAAAAAAAAAGAAGAATAATCTTCTGCTTTCTA
TAA
mRNA sequenceShow/hide mRNA sequence
TATCGCGGCAGTTCGGCGGCATCGACTTGGTAAGTGTTTGGAGGAGCACAGAGTTGAGAAGTAGAAGAAAAGAAAGCAAGCGAAAAAGGAGGAAGAAAAATGTCTGCAAG
CGGAAAGCGAAAGGACGACGAAGATCGCGTATCCGAAGGAGATGCTCCTCCTTCTAAAACATTCAGGAAAGATCCTGACGATGCCGATGAAATCGTCGTCTGCGAGCTTT
CAAAGAACCGTAGGGTTATGGTCAGGAAATGGCAAGGAAAGATTGTCGTCGATATTCGCGAGTTTTATGTCAAAGATGGCAAGCAGATGCCTGGAAAGAAAGGTATCTCG
CTATCCTTGGATCAGGTTTGCACCTATATTATTTTAATTTTTTTCCTTTTCCTTTTTTGTTTTAGGAAAAAAAAAAGAAGAATAATCTTCTGCTTTCTATAATGGCGGTC
TTCTGCAGTGGAACGTTCTCCTAAATCATGTAGAAGAAATTGACAAGGCTGTTAATGAGAACTCGTCAGGAGATTAAAACAGCATCTTTTTTTGATATTAGTAGCAAGAG
TATTGCTCCGTAGGGTTAACGACGAAACTGTGACCTTTTGTACAGCCAATGGGCTTGTTTTTGGTGGAAATGAAGACCAGAGAGCAGGCATATTAGCATTTATACATTAT
CACTGGATTGTTATTTTGAATTGTAGACCAGAGACATGATATTATTATAATATAGTATGGGCTAACGGACAATATTACTATTCTCAATTAGTGGATAATTGGGTATCCAG
TGGACATATTCACCAGTAATCTGATTTGGTTACAGCAATTCTAAGAGAGTCCAAGGTGCTAACTACTTTGAACCTCTTAGTTATTACATATTTAGCTTCAATGCCCTCAG
TTCTTGAGCCCACAAAGTGTAGCTTGAATTCTTTGCAATGACATCTTCAGAAACCTCCTTTCTTTCAATCAATCCTCTGGCATACCTTTCAAAGTTTTCAAGACTTTTCC
ATATTGGAGCCAACTTTCTCACATCTCCTCTTTTAATGATTTCCAGTAGGTCTTTGGCTTCCTCCAACCTTGCCCAAAAGCATGAATCTTGGGTCAAGCTTGCATATTTC
ATCCTCTGAGTATTCCCTTCCTCCGTGACTTCTCTTCCTCTCCACCATTTGTCAAAAATCTCATATCTTCTCTCTCTTCCACATTTCAAATAATGACCATGGACAATGTG
TGTATCACGACGGTAATATTCTGCAATGTCCAATGGCTCTACCAGGAGTTTGTAGAATTGTGAAGCATTGACCCACTTTGCCCTCATGTTAAAATCTGGAGGAAGCTCAT
TGTTCTCCCACATGTCGATCACTCGGTTCCAGAATGTTGCGAGCTTGTGCCTGTTCATATTTACTCTGTCATGTCTTACCGAAGCATCTTCTTTCTTGAAGCAATCGTAG
TAACCCAATTGGTTATCTGCTTCATCACAAGAGGTTTTGTACCATTCTATCTCAGCCCTGTAAGGTGTAATCTTTGATAAGCTTATGGCTAGTTTCGCGGCGTTCATGTT
TGGTGTTTGTCCTATTCTGCTTGCTGTTCTCAAGCTATGTTCGGCCATGTGAGCAACTTCATCCTGCAATTTTGAAATAAGCTCTAGTTAGTTTTAAAATCTAGGTTGTA
GGCTTTGTTTTAAGGAAAGTTCTTAAGGCTTATTACTTGGAAAGGTATTCCAGCCGACTCCAATGCCAGAGCAAGCCCAGCTTCATAGCTTGAATTAGGAAGACACAATG
AGTTGAGGTTCTTCCTCTCCATGTATTGAACTCCAACTTTTTTCACATGATCTCCATAGTTGAGATGGTCCTCAATGCTCAAGTTTGGAGCGCTTGTTTTGAGCATCAGA
TCGAGCATCTTCAGAACTGATATGGCATTATCCAAACAAATTGCACCGTGTTCTGAGCAAAAGAAGAAATTTCCAAATGGCCAAAACTGACTTTGTACTGATCCCTCTCC
TAGGTCGGATATCGTGTTGGAGTGAGCCAATACGATGTAGAAGAGTTCTTCTTTCTCTCTTTCTGTCAATTGGGTAGCAAGCTTCCCAAACTGTGGAGAGGCCATTGACA
AATGCCAATATCTAAAGATGATATGGAGCTTAGGAGAGAGAGAGGGCAGTGGTGTAGAGAGAAGCCTTGGCATAATGTCGTGGTTGGAGACGACATGGCAGAACTTGCCG
CACCATCTTTCTCTTTGAATGGCTCTTGAAAGCGACTCATTGCCTATCAATGGGGAGCCAAAGGTGATGCAGAGAATTGGATGATGATGGGTTTTGGTATGGAAGAAAGA
AAGCAACCAAAGTGTACATAGAGTGGCTGCTGCTCCTCCAAGTGAATGACCTGTAATTACTATTGACTTGCTTTTCTCCATTACCTTTGTCATCTGCAACATATATGACA
TTAGGAATGGCATATACCAAAACAAATATGTATGTATAGCACAGGCCTCTCGTTGAAAGTCTTTAGGCCTTTCTAAGTCAAAGTTCAAAGGAAAGTAAGAACTGACACAG
ATTTGTAAGACACAGAAAAGGGAAAAAAAGTAAACCATTTGAACCAAAAAGATGCTTTTTACTTGCCCCTTTTGGTCCC
Protein sequenceShow/hide protein sequence
MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQVCTYIILIFFLFLFCFRKKKRRIIFCFL