CuGenDBv2

Gene ID	Pay0001225
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Nucleolar protein 16
Genome location	chr01:31799452..31801451
RNA-Seq Expression	Pay0001225
Synteny	Pay0001225
Gene Ontology terms	GO:0042273 - ribosomal large subunit biogenesis (biological process) GO:0005730 - nucleolus (cellular component)
InterPro domains	IPR019002 - Ribosome biogenesis protein Nop16

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004136032.1 uncharacterized protein LOC101209910 [Cucumis sativus]

1.1e-98

97.89

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Query:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVL
        MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPD+VL
Subjt:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVL

Query:  DSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTRK
        DSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKY DDYQRMFMDTKLNSMQHSVATLEKLCKRY+SCLD NPLILTRK
Subjt:  DSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTRK

XP_008451586.1 PREDICTED: uncharacterized protein LOC103492822 [Cucumis melo]

2.0e-100

99.47

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Query:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVL
        MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVL
Subjt:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVL

Query:  DSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTRK
        DSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKY DDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTRK
Subjt:  DSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTRK

XP_022991747.1 uncharacterized protein LOC111488281 [Cucurbita maxima]

2.6e-92

91.19

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Query:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQV----PPSDDP
        MGRSRRKYK+SR KV+VGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDP WDEK SVI NYKSFGV+SNPNLLSVRSRTDHIVESDSLQV    PPSDDP
Subjt:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQV----PPSDDP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTR
        DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPL+PLTT+QRVHVG+LIEKY DD++RMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTR
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTR

XP_023547523.1 uncharacterized protein LOC111806441 [Cucurbita pepo subsp. pepo]

9.9e-92

90.67

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Query:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQV----PPSDDP
        MGRSRRKYK+SR KV+VGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDP WDEK SVI NYKSFGV+SNPNLLSVRSRTDHIVESDSLQV    PPSDDP
Subjt:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQV----PPSDDP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTR
        DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPL+PLTT+QRVHVG+LIEKY DD++RMFMDTKLNSMQHSVATLEKLCKRYH CLDKNPLILTR
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTR

XP_038898931.1 nucleolar protein 16 [Benincasa hispida]

1.8e-93

91.75

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Query:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQV----PPSDDP
        MGRSRRKYK+SRPKVKVGLPKR+PNVFKPSFCMPPKLRSLLAEQFEEDPTWD+K  VI NYKSFGVISNPNLLSVRSRTDHIVESDSLQV    PPSD+P
Subjt:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQV----PPSDDP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTRK
        DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTT+QRVHVG+LIEKY DDY+RMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLIL RK
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KAV9 Nucleolar protein 16

5.3e-99

97.89

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Query:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVL
        MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPD+VL
Subjt:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVL

Query:  DSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTRK
        DSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKY DDYQRMFMDTKLNSMQHSVATLEKLCKRY+SCLD NPLILTRK
Subjt:  DSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTRK

A0A1S3BSM4 Nucleolar protein 16

9.7e-101

99.47

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Query:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVL
        MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVL
Subjt:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVL

Query:  DSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTRK
        DSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKY DDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTRK
Subjt:  DSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTRK

A0A5A7VLA5 Nucleolar protein 16

9.7e-101

99.47

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Query:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVL
        MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVL
Subjt:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVL

Query:  DSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTRK
        DSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKY DDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTRK
Subjt:  DSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTRK

A0A6J1GRW5 Nucleolar protein 16

1.4e-91

90.16

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Query:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQV----PPSDDP
        MGRSRRKYK+SR KV+VGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDP WDEK SVI NYKSFGV+SNPNLLSVRSRTDHIVESD LQV    PPSDDP
Subjt:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQV----PPSDDP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTR
        DSVLDSSGSDVEEDDLKTALGKKR+DGKSAPL+PLTT+QRVHVG+LIEKY DD++RMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTR
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTR

A0A6J1JMQ4 Nucleolar protein 16

1.3e-92

91.19

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Query:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQV----PPSDDP
        MGRSRRKYK+SR KV+VGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDP WDEK SVI NYKSFGV+SNPNLLSVRSRTDHIVESDSLQV    PPSDDP
Subjt:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQV----PPSDDP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTR
        DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPL+PLTT+QRVHVG+LIEKY DD++RMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTR
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G02870.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome biogenesis protein Nop16 (InterPro:IPR019002); Has 104 Blast hits to 104 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

9.4e-64

62.24

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Query:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQV-----PPSDD
        M RSRRKY+ SR KV+V LPK+NPN+FKP+F  PPKLR+L+    ++ P WD++ SVIQNYKSFGVISNPNLL +R+RTDH+++ DSL V     PP+DD
Subjt:  MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQV-----PPSDD

Query:  P---DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILT
        P   +     SGS++EEDDLKTALGK+RKDGKSAPLQPLTT+QR H+ +L+EK+ DD + M+ D KLNSMQHSVATL KLC RY    DKNP++++
Subjt:  P---DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILT

Sequences

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CDS sequence

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ATGGGAAGGTCTCGAAGAAAGTACAAGAAATCTCGCCCAAAAGTTAAGGTTGGTTTGCCCAAAAGAAACCCTAATGTCTTCAAGCCGTCTTTTTGCATGCCGCCTAAGCT
CCGCTCCTTGCTCGCCGAACAATTTGAAGAAGATCCAACATGGGATGAGAAAGGAAGTGTCATTCAAAATTATAAATCCTTCGGTGTCATTTCTAATCCTAATTTGCTCA
GTGTTCGTTCCCGCACTGATCACATCGTTGAAAGCGACTCTCTCCAAGTCCCGCCATCCGATGACCCTGACTCCGTTCTTGATTCTTCCGGTAGTGATGTTGAAGAGGAC
GATTTGAAAACAGCGTTGGGAAAGAAGCGCAAAGATGGGAAATCTGCACCTCTACAACCGTTGACCACACTTCAGCGTGTTCATGTCGGTAAGCTAATCGAGAAATATGA
AGATGATTACCAGAGGATGTTTATGGATACAAAGCTGAACTCAATGCAGCATTCTGTTGCCACTCTGGAGAAACTATGCAAAAGATATCACAGTTGTTTAGATAAGAATC
CCTTGATATTGACTCGTAAATGA

mRNA sequence

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CGAAGTCCCAAATGAGTTCTTCATCTTCCACATACTAAAACCCTAGCCACCAATTTCCTTTTCTCCTTCCAATTCCCAGAGATGGGAAGGTCTCGAAGAAAGTACAAGAA
ATCTCGCCCAAAAGTTAAGGTTGGTTTGCCCAAAAGAAACCCTAATGTCTTCAAGCCGTCTTTTTGCATGCCGCCTAAGCTCCGCTCCTTGCTCGCCGAACAATTTGAAG
AAGATCCAACATGGGATGAGAAAGGAAGTGTCATTCAAAATTATAAATCCTTCGGTGTCATTTCTAATCCTAATTTGCTCAGTGTTCGTTCCCGCACTGATCACATCGTT
GAAAGCGACTCTCTCCAAGTCCCGCCATCCGATGACCCTGACTCCGTTCTTGATTCTTCCGGTAGTGATGTTGAAGAGGACGATTTGAAAACAGCGTTGGGAAAGAAGCG
CAAAGATGGGAAATCTGCACCTCTACAACCGTTGACCACACTTCAGCGTGTTCATGTCGGTAAGCTAATCGAGAAATATGAAGATGATTACCAGAGGATGTTTATGGATA
CAAAGCTGAACTCAATGCAGCATTCTGTTGCCACTCTGGAGAAACTATGCAAAAGATATCACAGTTGTTTAGATAAGAATCCCTTGATATTGACTCGTAAATGACGATAG
CTCCTTCATCTTTCAAATTGTTTTGTTACGAGAGGTGAAAATCAGATAAGGTATGATCATGAAATTTTATCGAGCAATATTGTTTTGAAACTAAACGTATGAGCCTTAAT
AGATAAATCATTCTTCCTGCTTCCTGTTGTTTTATTCCTATCAAGAAACTGCTCATAATTTGAATTTCATGTTTAGTTGCTCGCATCTAGGGGCTTCTTCATTTTGGGGA
AACTGATGGTGTGTTTGGAGTAATTTTGAGAAAAAATGCTTATAAAATCAAAATTGTCATTGAAAATATAAGATATATTACGATTTTATTTATTTTCGAAGTTGTTAAAC
AAGATGTTATTTAAATTACGTATTTATAAATATAACAAAATATTACTATTATTAGTTATTATTAGTTATGAACAGTGATAGTTAACCTAATAATTTTTTTTTCTTTTTTC
TTTTCATCTTCTTTGAAACTGTGATATTTGTTTACTTATTGAATGCTACCACATCACTAAAATCATGCTAA

Protein sequence

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MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVLDSSGSDVEED
DLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYEDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCLDKNPLILTRK

Pay0001225 (gene) of Melon (Payzawat) v1 genome