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Pay0001282 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0001282
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr09:8404781..8405840
RNA-Seq ExpressionPay0001282
SyntenyPay0001282
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040480.1 hypothetical protein E6C27_scaffold262G00150 [Cucumis melo var. makuwa]3.0e-8198.1Show/hide
Query:  SVLEKRKDVDTQDAAKKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEEDEEAKFIEADDGDRISCVIQRVLIAK
        SVLEKRKDVDTQDAAKKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEE NSISEDDKEEDEEAKFIEADDGDRISCVIQRVLIAK
Subjt:  SVLEKRKDVDTQDAAKKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEEDEEAKFIEADDGDRISCVIQRVLIAK

Query:  EETNPQWHNIFKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW
        EETNP+WHNIFK RCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW
Subjt:  EETNPQWHNIFKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW

KAA0047078.1 reverse transcriptase [Cucumis melo var. makuwa]7.3e-8066.94Show/hide
Query:  RSVAEYIEEFHRLSARTNLRENEQHQIAKFIDGLRLDIKEKVKLQPFRFLSKAIFLAEIVEEMMAAQIKNSNRRLHGKQTPPGNRLTSVLEKRKDVDTQD
        R+VA+YI+EFH L AR NL ENEQHQIA+FI GLR DIKEK+KLQPFRFLS+AI  AE VEEM A + KN +              TS   K K+V+TQD
Subjt:  RSVAEYIEEFHRLSARTNLRENEQHQIAKFIDGLRLDIKEKVKLQPFRFLSKAIFLAEIVEEMMAAQIKNSNRRLHGKQTPPGNRLTSVLEKRKDVDTQD

Query:  AA--KKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEEDEEAKFIEADDGDRISCVIQRVLIA-KEETNPQWHNI
         A  KK+E  +KGK QN Y RPSL KCFRCGQ GH SN CPQRKTIALA +E +S SE  +E +EEAK IEADDG R+SCVIQRVL+A KEETNPQ H++
Subjt:  AA--KKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEEDEEAKFIEADDGDRISCVIQRVLIA-KEETNPQWHNI

Query:  FKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW
        FKTRCTING+VCDVII++ SS+NFVA+KLVT LNLK +PHPNPYKIGW
Subjt:  FKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW

KAA0059834.1 uncharacterized protein E6C27_scaffold108G001170 [Cucumis melo var. makuwa]2.8e-8766.67Show/hide
Query:  MKKLLKARFLPPNY--------------NRSVAEYIEEFHRLSARTNLRENEQHQIAKFIDGLRLDIKEKVKLQPFRFLSKAIFLAEIVEEMMAAQIKNS
        MKKLLKARFLPPNY              +RS+AEYIEEFHRLSARTNL ENEQHQIA+FI                          E VEEMM A +K+S
Subjt:  MKKLLKARFLPPNY--------------NRSVAEYIEEFHRLSARTNLRENEQHQIAKFIDGLRLDIKEKVKLQPFRFLSKAIFLAEIVEEMMAAQIKNS

Query:  NRRL-----HGKQTPPGNRL-----TSVLEKRKDVDTQDAAKKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEE
        NR+        K+    +R      TSV  K KDVDTQDAAKKK+N  KGKSQNTYTRPSL+KCFRCGQSGHLSNNCPQR+TI+LA +E NSISEDDKEE
Subjt:  NRRL-----HGKQTPPGNRL-----TSVLEKRKDVDTQDAAKKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEE

Query:  DEEAKFIEADDGDRISCVIQRVLIA-KEETNPQWHNIFKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW
        +EEA+FIEADDGDRIS VIQRVLIA KEETNPQ H++FKTRCTIN RVCDVII+S SS+NFVARKLVTILNLKT+P+PNPYKIGW
Subjt:  DEEAKFIEADDGDRISCVIQRVLIA-KEETNPQWHNIFKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW

XP_031741035.1 uncharacterized protein LOC116403692 [Cucumis sativus]1.4e-8664.54Show/hide
Query:  MKKLLKARFLPPNYN--------------RSVAEYIEEFHRLSARTNLRENEQHQIAKFIDGLRLDIKEKVKLQPFRFLSKAIFLAEIVEEMMAAQIKNS
        MKKLLKARFLPPNY               RSVAEYIEEFHRLSARTNL ENEQHQ+A+F+ GLR DIKEKV+LQPFRFLS+AI  AE VEEM+A + KN 
Subjt:  MKKLLKARFLPPNYN--------------RSVAEYIEEFHRLSARTNLRENEQHQIAKFIDGLRLDIKEKVKLQPFRFLSKAIFLAEIVEEMMAAQIKNS

Query:  NRRLHGKQTPPGNRL-----TSVLEKRKDVDTQDAA--KKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEEDEE
        NRR   +     ++      TS   K K++D Q+ A  +KKE   K   QN+Y+RPSL KCFRCGQ+GHLS+NCPQRKTIA+A EEG  ISED  E +EE
Subjt:  NRRLHGKQTPPGNRL-----TSVLEKRKDVDTQDAA--KKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEEDEE

Query:  AKFIEADDGDRISCVIQRVLIA-KEETNPQWHNIFKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW
         + IEADDG+R+SCVIQR+LI  KEE N Q H +FKTRCTINGRVCDVII+S SS+NFVA+KLVT+LNLK + HPNPYKIGW
Subjt:  AKFIEADDGDRISCVIQRVLIA-KEETNPQWHNIFKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW

XP_031743026.1 uncharacterized protein LOC116404533 [Cucumis sativus]1.5e-8060.2Show/hide
Query:  MKKLLKARFLPPNYN--------------RSVAEYIEEFHRLSARTNLRENEQHQIAKFIDGLRLDIKEKVKLQPFRFLSKAIFLAEIVEEMMAAQIKNS
        MKKLLKARFLPPNY               R+VAEYIEEFHRLSARTNL ENEQHQ+A+F+ GLR DIKEKV+LQPFRFLS+AI  AE VEEM+A + KN 
Subjt:  MKKLLKARFLPPNYN--------------RSVAEYIEEFHRLSARTNLRENEQHQIAKFIDGLRLDIKEKVKLQPFRFLSKAIFLAEIVEEMMAAQIKNS

Query:  NRRLHGKQTPPGNRL-----TSVLEKRKDVDTQDAA--KKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEEDEE
        NRR   +     ++      TS   K K++D Q+ A  +KKE   K   QN Y+RPSL KCFRCGQ+GHLSNNCPQRKTIA+A EEG   SED  E +EE
Subjt:  NRRLHGKQTPPGNRL-----TSVLEKRKDVDTQDAA--KKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEEDEE

Query:  AKFIEADDGDRISCVIQRVLIA-KEETNPQWHNIFKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGWKIHTNSNGWERK
         + IEADDG+R+SCVIQR+LI  KEE N Q H +FKTRCTINGRVCDVII+S SS+NFVA+KLVT+LNLK +            H + NGWE +
Subjt:  AKFIEADDGDRISCVIQRVLIA-KEETNPQWHNIFKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGWKIHTNSNGWERK

TrEMBL top hitse value%identityAlignment
A0A5A7T256 Reverse transcriptase4.5e-6758.98Show/hide
Query:  VAEYIEEFHRLSARTNLRENEQHQIAKFIDGLRLDIKEKVKLQPFRFLSKAIFLAEIVEEMMAAQIKNSNRRL-----------HGKQTPPGNRLTSVLE
        VAEYIEEFHRLSAR NL ENEQHQIA+FI GLR DIKEKVKL  FR LS+AI LAE VEEMM  ++KNSNRR            +GK+T      TS+++
Subjt:  VAEYIEEFHRLSARTNLRENEQHQIAKFIDGLRLDIKEKVKLQPFRFLSKAIFLAEIVEEMMAAQIKNSNRRL-----------HGKQTPPGNRLTSVLE

Query:  KRKDVDTQDAAKKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDK-EEDEEAKFIEADDGDRISCVIQRVLIA-KEE
        K K +D Q+  KKKE+  +GK+QN YTRPSL KCFRCG+ GHLSNNC QRKTIALA +E   +S  D+ EE+EE + IEADDGDRISC++QRVLI  KEE
Subjt:  KRKDVDTQDAAKKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDK-EEDEEAKFIEADDGDRISCVIQRVLIA-KEE

Query:  TNPQWHNIFKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW
        TNPQ H++FKTRCTING+V                           PHP+PYKIGW
Subjt:  TNPQWHNIFKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW

A0A5A7UXS4 CCHC-type domain-containing protein1.3e-8766.67Show/hide
Query:  MKKLLKARFLPPNY--------------NRSVAEYIEEFHRLSARTNLRENEQHQIAKFIDGLRLDIKEKVKLQPFRFLSKAIFLAEIVEEMMAAQIKNS
        MKKLLKARFLPPNY              +RS+AEYIEEFHRLSARTNL ENEQHQIA+FI                          E VEEMM A +K+S
Subjt:  MKKLLKARFLPPNY--------------NRSVAEYIEEFHRLSARTNLRENEQHQIAKFIDGLRLDIKEKVKLQPFRFLSKAIFLAEIVEEMMAAQIKNS

Query:  NRRL-----HGKQTPPGNRL-----TSVLEKRKDVDTQDAAKKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEE
        NR+        K+    +R      TSV  K KDVDTQDAAKKK+N  KGKSQNTYTRPSL+KCFRCGQSGHLSNNCPQR+TI+LA +E NSISEDDKEE
Subjt:  NRRL-----HGKQTPPGNRL-----TSVLEKRKDVDTQDAAKKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEE

Query:  DEEAKFIEADDGDRISCVIQRVLIA-KEETNPQWHNIFKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW
        +EEA+FIEADDGDRIS VIQRVLIA KEETNPQ H++FKTRCTIN RVCDVII+S SS+NFVARKLVTILNLKT+P+PNPYKIGW
Subjt:  DEEAKFIEADDGDRISCVIQRVLIA-KEETNPQWHNIFKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW

A0A5D3C3X9 Reverse transcriptase3.5e-8066.94Show/hide
Query:  RSVAEYIEEFHRLSARTNLRENEQHQIAKFIDGLRLDIKEKVKLQPFRFLSKAIFLAEIVEEMMAAQIKNSNRRLHGKQTPPGNRLTSVLEKRKDVDTQD
        R+VA+YI+EFH L AR NL ENEQHQIA+FI GLR DIKEK+KLQPFRFLS+AI  AE VEEM A + KN +              TS   K K+V+TQD
Subjt:  RSVAEYIEEFHRLSARTNLRENEQHQIAKFIDGLRLDIKEKVKLQPFRFLSKAIFLAEIVEEMMAAQIKNSNRRLHGKQTPPGNRLTSVLEKRKDVDTQD

Query:  AA--KKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEEDEEAKFIEADDGDRISCVIQRVLIA-KEETNPQWHNI
         A  KK+E  +KGK QN Y RPSL KCFRCGQ GH SN CPQRKTIALA +E +S SE  +E +EEAK IEADDG R+SCVIQRVL+A KEETNPQ H++
Subjt:  AA--KKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEEDEEAKFIEADDGDRISCVIQRVLIA-KEETNPQWHNI

Query:  FKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW
        FKTRCTING+VCDVII++ SS+NFVA+KLVT LNLK +PHPNPYKIGW
Subjt:  FKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW

A0A5D3DJB8 CCHC-type domain-containing protein1.4e-8198.1Show/hide
Query:  SVLEKRKDVDTQDAAKKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEEDEEAKFIEADDGDRISCVIQRVLIAK
        SVLEKRKDVDTQDAAKKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEE NSISEDDKEEDEEAKFIEADDGDRISCVIQRVLIAK
Subjt:  SVLEKRKDVDTQDAAKKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEEDEEAKFIEADDGDRISCVIQRVLIAK

Query:  EETNPQWHNIFKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW
        EETNP+WHNIFK RCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW
Subjt:  EETNPQWHNIFKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW

A0A5D3E417 Transposon Ty3-I Gag-Pol polyprotein isoform X16.9e-6858.82Show/hide
Query:  VAEYIEEFHRLSARTNLRENEQHQIAKFIDGLRLDIKEKVKLQPFRFLSKAIFLAEIVEEMMAAQIKNSNRRL-----------HGKQTPPGNRLTSVLE
        VAEYIEEFHRL AR NL ENEQHQIA+FI GLR DIKEKVKL  FR LS+AI LAE VEEMM  ++KNSNRR            +GK+T      TS+++
Subjt:  VAEYIEEFHRLSARTNLRENEQHQIAKFIDGLRLDIKEKVKLQPFRFLSKAIFLAEIVEEMMAAQIKNSNRRL-----------HGKQTPPGNRLTSVLE

Query:  KRKDVDTQDAAKKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEEDEEAKFIEADDGDRISCVIQRVLIA-KEET
        K K +D Q+  KKKE+  +GK+QN YTRPSL KCFRCG+ GHLSNNC QRKTIALA +E   +S  D+EE+EE + IEADDGDRISC++QRVLI  KEET
Subjt:  KRKDVDTQDAAKKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEEDEEAKFIEADDGDRISCVIQRVLIA-KEET

Query:  NPQWHNIFKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW
        NPQ H++FKTRCTING+V                           PHP+PYKIGW
Subjt:  NPQWHNIFKTRCTINGRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGCTATTAAAAGCACGTTTCCTACCTCCAAACTACAATCGATCAGTAGCTGAGTACATTGAAGAATTTCATAGATTGAGCGCAAGAACCAATCTAAGAGAGAA
TGAACAGCACCAAATAGCAAAGTTTATTGATGGTCTCCGATTAGATATAAAGGAGAAAGTAAAACTGCAACCATTTCGCTTCTTGTCTAAAGCCATTTTCCTTGCAGAGA
TAGTGGAAGAGATGATGGCTGCTCAGATAAAGAACTCAAACAGGAGACTACATGGAAAGCAAACTCCACCAGGAAACAGACTTACATCAGTTTTAGAGAAGCGTAAAGAT
GTTGATACTCAGGATGCAGCCAAGAAGAAAGAAAATAAAAGCAAAGGGAAAAGCCAGAACACCTACACTCGCCCATCTTTGAAGAAGTGTTTTCGATGTGGCCAATCTGG
CCACTTATCCAACAATTGCCCTCAAAGGAAGACTATAGCATTAGCTCATGAAGAGGGCAATTCTATAAGCGAAGATGATAAAGAAGAAGATGAGGAAGCAAAATTCATAG
AAGCTGATGATGGGGATCGAATTTCTTGTGTCATACAAAGGGTCCTCATTGCTAAAGAAGAAACAAATCCTCAATGGCACAACATATTCAAGACGAGATGTACTATCAAT
GGGAGAGTTTGTGATGTAATAATTAATAGCGAAAGCAGTCAGAACTTTGTGGCAAGGAAGCTTGTAACCATCCTAAACTTGAAAACCGATCCTCACCCAAATCCATATAA
GATAGGATGGAAAATACATACAAATTCCAATGGATGGGAAAGAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGCTATTAAAAGCACGTTTCCTACCTCCAAACTACAATCGATCAGTAGCTGAGTACATTGAAGAATTTCATAGATTGAGCGCAAGAACCAATCTAAGAGAGAA
TGAACAGCACCAAATAGCAAAGTTTATTGATGGTCTCCGATTAGATATAAAGGAGAAAGTAAAACTGCAACCATTTCGCTTCTTGTCTAAAGCCATTTTCCTTGCAGAGA
TAGTGGAAGAGATGATGGCTGCTCAGATAAAGAACTCAAACAGGAGACTACATGGAAAGCAAACTCCACCAGGAAACAGACTTACATCAGTTTTAGAGAAGCGTAAAGAT
GTTGATACTCAGGATGCAGCCAAGAAGAAAGAAAATAAAAGCAAAGGGAAAAGCCAGAACACCTACACTCGCCCATCTTTGAAGAAGTGTTTTCGATGTGGCCAATCTGG
CCACTTATCCAACAATTGCCCTCAAAGGAAGACTATAGCATTAGCTCATGAAGAGGGCAATTCTATAAGCGAAGATGATAAAGAAGAAGATGAGGAAGCAAAATTCATAG
AAGCTGATGATGGGGATCGAATTTCTTGTGTCATACAAAGGGTCCTCATTGCTAAAGAAGAAACAAATCCTCAATGGCACAACATATTCAAGACGAGATGTACTATCAAT
GGGAGAGTTTGTGATGTAATAATTAATAGCGAAAGCAGTCAGAACTTTGTGGCAAGGAAGCTTGTAACCATCCTAAACTTGAAAACCGATCCTCACCCAAATCCATATAA
GATAGGATGGAAAATACATACAAATTCCAATGGATGGGAAAGAAAGTAA
Protein sequenceShow/hide protein sequence
MKKLLKARFLPPNYNRSVAEYIEEFHRLSARTNLRENEQHQIAKFIDGLRLDIKEKVKLQPFRFLSKAIFLAEIVEEMMAAQIKNSNRRLHGKQTPPGNRLTSVLEKRKD
VDTQDAAKKKENKSKGKSQNTYTRPSLKKCFRCGQSGHLSNNCPQRKTIALAHEEGNSISEDDKEEDEEAKFIEADDGDRISCVIQRVLIAKEETNPQWHNIFKTRCTIN
GRVCDVIINSESSQNFVARKLVTILNLKTDPHPNPYKIGWKIHTNSNGWERK