CuGenDBv2

Gene ID	Pay0001392
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	GDP-mannose transporter, putative
Genome location	chr11:437294..441011
RNA-Seq Expression	Pay0001392
Synteny	Pay0001392
Gene Ontology terms	GO:0007219 - Notch signaling pathway (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0070765 - gamma-secretase complex (cellular component)
InterPro domains	IPR019379 - Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0040759.1 putative gamma-secretase subunit PEN-2 [Cucumis melo var. makuwa]

1.8e-56

75.16

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Query:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDT
        METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGL           FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRP                    
Subjt:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDT

Query:  PFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
                 IVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  PFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

XP_008460893.1 PREDICTED: probable gamma-secretase subunit PEN-2 [Cucumis melo]

6.5e-78

93.17

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Query:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDT
        METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGL           FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDT
Subjt:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDT

Query:  PFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
        PFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  PFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

XP_011649406.1 probable gamma-secretase subunit PEN-2 [Cucumis sativus]

2.7e-52

71.43

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Query:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDT
        MET  NPNANTNSNPNTI+SPI VLWPTIDGSLGL           FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRP                    
Subjt:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDT

Query:  PFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
                 IVGSAIGFGV MAIISSWALTFSIGGERLFGPVWDKLVMYNLADK+GLTGWS
Subjt:  PFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

XP_022971629.1 probable gamma-secretase subunit PEN-2 [Cucurbita maxima]

1.0e-46

65.45

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Query:  METSHNPNANTNSNP----NTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSIT
        ME S N N+N N NP    N ++SPI VLWPTIDGSLGL           FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRP                
Subjt:  METSHNPNANTNSNP----NTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSIT

Query:  LEDTPFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
                     IVGSAIGF V MAIISSWALTF+IGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  LEDTPFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

XP_038900346.1 probable gamma-secretase subunit PEN-2 [Benincasa hispida]

1.8e-48

66.47

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Query:  METSHNPNANTNSNP------NTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRS
        ME+S NPN NTNSNP      N ++SPI VLWPTIDGSLGL           FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRP              
Subjt:  METSHNPNANTNSNP------NTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRS

Query:  ITLEDTPFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
                       IVGSAIGFGV MAIISSWALTFSIGGERLFG VWDKLVMYNLAD+LGLTGWS
Subjt:  ITLEDTPFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LK38 Uncharacterized protein

1.3e-52

71.43

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Query:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDT
        MET  NPNANTNSNPNTI+SPI VLWPTIDGSLGL           FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRP                    
Subjt:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDT

Query:  PFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
                 IVGSAIGFGV MAIISSWALTFSIGGERLFGPVWDKLVMYNLADK+GLTGWS
Subjt:  PFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A1S3CDI1 probable gamma-secretase subunit PEN-2

3.1e-78

93.17

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Query:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDT
        METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGL           FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDT
Subjt:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDT

Query:  PFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
        PFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  PFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A5A7THJ9 Putative gamma-secretase subunit PEN-2

8.8e-57

75.16

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Query:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDT
        METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGL           FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRP                    
Subjt:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDT

Query:  PFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
                 IVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  PFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A6J1F097 probable gamma-secretase subunit PEN-2

1.8e-46

64.85

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Query:  METSHNPNANTNSNP----NTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSIT
        ME S N N+N N NP    N ++SPI VLWPTIDGSLGL           FYKFGFALLPFLWAVNCFYFWPVLRS SFPRIRP                
Subjt:  METSHNPNANTNSNP----NTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSIT

Query:  LEDTPFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
                     IVGSAIGF V MAIISSWALTF+IGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  LEDTPFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A6J1I943 probable gamma-secretase subunit PEN-2

4.9e-47

65.45

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Query:  METSHNPNANTNSNP----NTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSIT
        ME S N N+N N NP    N ++SPI VLWPTIDGSLGL           FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRP                
Subjt:  METSHNPNANTNSNP----NTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSIT

Query:  LEDTPFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
                     IVGSAIGF V MAIISSWALTF+IGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  LEDTPFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

SwissProt top hits

e value

%identity

Alignment

Q9FY84 Probable gamma-secretase subunit PEN-2

1.0e-33

53.8

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Query:  SHNPNANTNSNP-NTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPSFQTVTLMLEFSRSITLEDTP
        + NPN N N NP +TI S   V WPTIDG LGL           FYKFGFALLP+LW VNCFYFWPVLR SR+FP+IR                      
Subjt:  SHNPNANTNSNP-NTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPSFQTVTLMLEFSRSITLEDTP

Query:  FSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTG
                +V SAIGF V  A++S+WALTFSIGGE+LFGP++DKLVMYN+AD+LGL+G
Subjt:  FSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTG

Arabidopsis top hits

e value

%identity

Alignment

AT5G09310.1 CONTAINS InterPro DOMAIN/s: Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit (InterPro:IPR019379); Has 168 Blast hits to 168 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

7.2e-35

53.8

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Query:  SHNPNANTNSNP-NTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPSFQTVTLMLEFSRSITLEDTP
        + NPN N N NP +TI S   V WPTIDG LGL           FYKFGFALLP+LW VNCFYFWPVLR SR+FP+IR                      
Subjt:  SHNPNANTNSNP-NTITSPIPVLWPTIDGSLGL-----------FYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPSFQTVTLMLEFSRSITLEDTP

Query:  FSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTG
                +V SAIGF V  A++S+WALTFSIGGE+LFGP++DKLVMYN+AD+LGL+G
Subjt:  FSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTG

Sequences

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CDS sequence

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mRNA sequence

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ATGGAGACCTCGCATAATCCAAACGCAAACACCAATTCCAATCCTAATACCATAACGTCGCCAATTCCTGTGTTATGGCCGACCATTGATGGCTCTCTGGGTTTGTTCTA
CAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTATTTCTGGCCTGTTCTTCGCTCCCGCTCGTTTCCTCGCATCCGACCCTCTTTTCAGACGG
TCACTCTGATGCTGGAGTTTTCAAGATCAATAACTTTGGAGGATACTCCTTTTTCAAGACCATTTATCATTGATATTGTTGGCTCAGCTATCGGCTTTGGTGTTTCCATG
GCCATTATCTCGTCTTGGGCATTGACATTTTCCATCGGAGGAGAACGCCTGTTTGGACCTGTTTGGGATAAACTAGTGATGTACAATCTTGCTGACAAATTAGGATTAAC
AGGTTGGAGCTAGTCTGGTTCCCTCCCTTCGGCAACCAACTTCAACCTTCTTGTATATATCAAAATCTGTAACTCTCTACTGTCATTGTTTTCTTGAAAGATCAAAGTTG
AAGCTTTTGGTTTCCCTTCTTCAAGTGTTCCAATTGTCGAACATGAACCTTTGCATTACCCATGTTGATTCTTGTTAATAGTTGATTCACAAGTTTGAATCGGATCTCCC
TTCAACGGCGGACTAAGATTTGTGGATAAAATTCTAAACTGGTTCTCTTGAATTCTTCTTTGCTTTCTTTCTGTCCCACTTTCAATACTATAAGCCGTGCTCTTTTCTGG
TTCCCCTACATCAAAACATCCATTTTGAAGGTTGAAAACATCTTGAAGCAAGTTAGAAACTCCCTTAAAATTCTTAAGGGACAGTGTACAGTGATCAACAATCCCCAAAA
GAAAGGTATGATTGTATACTGTAACACTTCTTGTTATGGATATATTAGGATAACTTGTATGGTTGGTAAAAGGGTATTTTAGTAAATAGTTAGGTTTTTTTTATAGAACT
TTTAGTTGTAAACAAGAGGGAGTGTGGTCGAGAGAATTTTTTTGTGGGATTTTCTTTCCAGAGGGCTATTAGGGAGAGAGTAGCTCTCTTGAAAGGCTAGATTATCTTGT
TACTTTTCCTACTTTTC

Protein sequence

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METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDTPFSRPFIIDIVGSAIGFGVSM
AIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

Pay0001392 (gene) of Melon (Payzawat) v1 genome