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Pay0001408 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0001408
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionAUGMIN subunit 1
Genome locationchr09:14989424..14999766
RNA-Seq ExpressionPay0001408
SyntenyPay0001408
Gene Ontology termsGO:0005622 - intracellular (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136688.2 AUGMIN subunit 1 isoform X1 [Cucumis sativus]2.8e-0443.9Show/hide
Query:  MSSTVDFDLKMGSDITSQIAQV-----------------------NISRFPNLYNLSQTKTHGTEILAKYFHFKVVEYRAQD
        MS  VD D KMGSD TS+IA+V                       ++S   NL NLSQ KT   EILAK F  K  EYRAQ+
Subjt:  MSSTVDFDLKMGSDITSQIAQV-----------------------NISRFPNLYNLSQTKTHGTEILAKYFHFKVVEYRAQD

XP_008455693.1 PREDICTED: AUGMIN subunit 1 [Cucumis melo]6.2e-0444.44Show/hide
Query:  MSSTVDFDLKMGSDITSQIAQV-----------------------NISRFPNLYNLSQTKTHGTEILAKYFHFKVVEYRAQ
        MS  VD D KMGSD TS+IA+V                       ++S   NL NLSQ KT   EILAK F  K  EYRAQ
Subjt:  MSSTVDFDLKMGSDITSQIAQV-----------------------NISRFPNLYNLSQTKTHGTEILAKYFHFKVVEYRAQ

TrEMBL top hitse value%identityAlignment
A0A0A0L0G7 Uncharacterized protein6.7e-0443.21Show/hide
Query:  MSSTVDFDLKMGSDITSQIAQV-----------------------NISRFPNLYNLSQTKTHGTEILAKYFHFKVVEYRAQ
        MS  VD D K+GSD TS+IA+V                       ++S   NL NLSQ KT   EILAK F  K  EYRAQ
Subjt:  MSSTVDFDLKMGSDITSQIAQV-----------------------NISRFPNLYNLSQTKTHGTEILAKYFHFKVVEYRAQ

A0A0A0LC18 Uncharacterized protein1.4e-0443.9Show/hide
Query:  MSSTVDFDLKMGSDITSQIAQV-----------------------NISRFPNLYNLSQTKTHGTEILAKYFHFKVVEYRAQD
        MS  VD D KMGSD TS+IA+V                       ++S   NL NLSQ KT   EILAK F  K  EYRAQ+
Subjt:  MSSTVDFDLKMGSDITSQIAQV-----------------------NISRFPNLYNLSQTKTHGTEILAKYFHFKVVEYRAQD

A0A1S3C262 AUGMIN subunit 13.0e-0444.44Show/hide
Query:  MSSTVDFDLKMGSDITSQIAQV-----------------------NISRFPNLYNLSQTKTHGTEILAKYFHFKVVEYRAQ
        MS  VD D KMGSD TS+IA+V                       ++S   NL NLSQ KT   EILAK F  K  EYRAQ
Subjt:  MSSTVDFDLKMGSDITSQIAQV-----------------------NISRFPNLYNLSQTKTHGTEILAKYFHFKVVEYRAQ

A0A5A7VAQ7 AUGMIN subunit 13.0e-0444.44Show/hide
Query:  MSSTVDFDLKMGSDITSQIAQV-----------------------NISRFPNLYNLSQTKTHGTEILAKYFHFKVVEYRAQ
        MS  VD D KMGSD TS+IA+V                       ++S   NL NLSQ KT   EILAK F  K  EYRAQ
Subjt:  MSSTVDFDLKMGSDITSQIAQV-----------------------NISRFPNLYNLSQTKTHGTEILAKYFHFKVVEYRAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCGACAGTCGATTTTGATTTGAAAATGGGATCAGATATAACCAGTCAAATTGCCCAAGTGAACATCTCTCGCTTTCCCAATCTCTACAATCTCTCCCAAACAAA
GACACACGGCACTGAGATTTTGGCCAAATACTTCCACTTCAAGGTTGTCGAGTACCGTGCCCAAGATTTTGAAGCAGAAACTGAACTCATGACAACTTTCGTTCATCTTA
AGTTTGCAAACTCTGGTGCCATATTATATGCTTTTTTTCTCTTTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCATCGACAGTCGATTTTGATTTGAAAATGGGATCAGATATAACCAGTCAAATTGCCCAAGTGAACATCTCTCGCTTTCCCAATCTCTACAATCTCTCCCAAACAAA
GACACACGGCACTGAGATTTTGGCCAAATACTTCCACTTCAAGGTTGTCGAGTACCGTGCCCAAGATTTTGAAGCAGAAACTGAACTCATGACAACTTTCGTTCATCTTA
AGTTTGCAAACTCTGGTGCCATATTATATGCTTTTTTTCTCTTTGCATAA
Protein sequenceShow/hide protein sequence
MSSTVDFDLKMGSDITSQIAQVNISRFPNLYNLSQTKTHGTEILAKYFHFKVVEYRAQDFEAETELMTTFVHLKFANSGAILYAFFLFA