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Pay0001415 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0001415
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description60S ribosomal protein L7a
Genome locationchr10:24748492..24748868
RNA-Seq ExpressionPay0001415
SyntenyPay0001415
Gene Ontology termsGO:0000470 - maturation of LSU-rRNA (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001921 - Ribosomal protein L7A/L8
IPR029064 - 50S ribosomal protein L30e-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065509.1 60S ribosomal protein L7a-2-like isoform X2 [Cucumis melo var. makuwa]1.8e-3798.75Show/hide
Query:  IHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG
        +HKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG
Subjt:  IHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG

KCW83216.1 hypothetical protein EUGRSUZ_B00159 [Eucalyptus grandis]4.0e-1354.95Show/hide
Query:  KRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKS----------QKRYKWSSAGFLKSFKGNFN-KYDDDNKKWGGGNHG
        +RK+ I +QRLK+PP+ NQFTKT DKNLATNLFKMLLKYR EDK           +   K   +  L++ K NFN KYD+  KKWGGG  G
Subjt:  KRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKS----------QKRYKWSSAGFLKSFKGNFN-KYDDDNKKWGGGNHG

TYK29257.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.9e-1186.96Show/hide
Query:  KKLEKRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAE
        K + +RKKGI KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRA+
Subjt:  KKLEKRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAE

XP_008464759.1 PREDICTED: uncharacterized protein LOC103502565 [Cucumis melo]1.5e-5299.07Show/hide
Query:  MDRLVQNGTKEVVGNRLAKKKLEKRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGG
        MDRLVQNGTKEVVGNRLAKKKLEKRKKG+HKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGG
Subjt:  MDRLVQNGTKEVVGNRLAKKKLEKRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGG

Query:  NHGLQVLG
        NHGLQVLG
Subjt:  NHGLQVLG

XP_038875632.1 60S ribosomal protein L7a-2-like [Benincasa hispida]2.9e-1183.33Show/hide
Query:  KRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        +RKK I KQRLK+PP+ NQFTKT DKNLATNLFKMLLKYR EDKSQKR
Subjt:  KRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR

TrEMBL top hitse value%identityAlignment
A0A059CYF1 60S ribosomal protein L7a1.9e-1354.95Show/hide
Query:  KRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKS----------QKRYKWSSAGFLKSFKGNFN-KYDDDNKKWGGGNHG
        +RK+ I +QRLK+PP+ NQFTKT DKNLATNLFKMLLKYR EDK           +   K   +  L++ K NFN KYD+  KKWGGG  G
Subjt:  KRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKS----------QKRYKWSSAGFLKSFKGNFN-KYDDDNKKWGGGNHG

A0A1S3CM74 60S ribosomal protein L7a7.3e-5399.07Show/hide
Query:  MDRLVQNGTKEVVGNRLAKKKLEKRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGG
        MDRLVQNGTKEVVGNRLAKKKLEKRKKG+HKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGG
Subjt:  MDRLVQNGTKEVVGNRLAKKKLEKRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGG

Query:  NHGLQVLG
        NHGLQVLG
Subjt:  NHGLQVLG

A0A5A7VB90 Pentatricopeptide repeat-containing protein1.4e-1186.96Show/hide
Query:  KKLEKRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAE
        K + +RKKGI KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRA+
Subjt:  KKLEKRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAE

A0A5A7VJ69 60S ribosomal protein L7a8.6e-3898.75Show/hide
Query:  IHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG
        +HKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG
Subjt:  IHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG

A0A5D3DZF5 Pentatricopeptide repeat-containing protein1.4e-1186.96Show/hide
Query:  KKLEKRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAE
        K + +RKKGI KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRA+
Subjt:  KKLEKRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAE

SwissProt top hitse value%identityAlignment
P0DKK7 60S ribosomal protein L7a-21.3e-1170.83Show/hide
Query:  KRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        +R++ I KQRLK+PP+ NQFT+T DKNLATNLFKMLLKYR EDK+ K+
Subjt:  KRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR

P35685 60S ribosomal protein L7a-11.3e-1170.83Show/hide
Query:  KRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        +R++ I KQRLK+PP+ NQFT+T DKNLATNLFKMLLKYR EDK+ K+
Subjt:  KRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR

P49692 60S ribosomal protein L7a-13.0e-1170.83Show/hide
Query:  KRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        +R+K I KQRLK+PP+ NQFTKT DKNLAT+LFK+LLKYR EDK+ K+
Subjt:  KRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR

Q54ZD1 60S ribosomal protein L7a1.7e-0652.94Show/hide
Query:  KLEKRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        KL+++++ + K RLK+PP+ NQFT+ FDKN A +LFK+L KYR E+ S K+
Subjt:  KLEKRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR

Q9LZH9 60S ribosomal protein L7a-23.0e-1170.83Show/hide
Query:  KRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        +R+K I KQRLK+PP+ NQFTKT DKNLAT+LFK+LLKYR EDK+ K+
Subjt:  KRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR

Arabidopsis top hitse value%identityAlignment
AT2G47610.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein2.1e-1270.83Show/hide
Query:  KRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        +R+K I KQRLK+PP+ NQFTKT DKNLAT+LFK+LLKYR EDK+ K+
Subjt:  KRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR

AT3G62870.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein2.1e-1270.83Show/hide
Query:  KRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        +R+K I KQRLK+PP+ NQFTKT DKNLAT+LFK+LLKYR EDK+ K+
Subjt:  KRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGGCTTGTGCAAAATGGAACCAAAGAAGTGGTTGGAAATCGCTTGGCAAAAAAGAAGCTGGAGAAGAGGAAGAAGGGGATACATAAACAGAGGTTGAAGATTCC
ACCATCTTCGAATCAGTTCACTAAGACCTTCGACAAAAATCTTGCGACTAACCTGTTCAAGATGCTTTTGAAATATAGGGCAGAGGACAAATCACAGAAAAGGTATAAGT
GGAGTTCAGCAGGATTCTTGAAGTCATTTAAGGGCAATTTCAACAAGTACGACGACGACAATAAGAAGTGGGGAGGTGGAAATCATGGGCTCCAAGTCTTAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGGCTTGTGCAAAATGGAACCAAAGAAGTGGTTGGAAATCGCTTGGCAAAAAAGAAGCTGGAGAAGAGGAAGAAGGGGATACATAAACAGAGGTTGAAGATTCC
ACCATCTTCGAATCAGTTCACTAAGACCTTCGACAAAAATCTTGCGACTAACCTGTTCAAGATGCTTTTGAAATATAGGGCAGAGGACAAATCACAGAAAAGGTATAAGT
GGAGTTCAGCAGGATTCTTGAAGTCATTTAAGGGCAATTTCAACAAGTACGACGACGACAATAAGAAGTGGGGAGGTGGAAATCATGGGCTCCAAGTCTTAGGCTAA
Protein sequenceShow/hide protein sequence
MDRLVQNGTKEVVGNRLAKKKLEKRKKGIHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG